Strain Fitness in Pantoea sp. MT58 around IAI47_06910

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,450,845	+				-2.6
1,450,892	-				-0.9
1,450,893	+				+1.4
1,450,893	+				+0.3
1,450,894	-				-1.1
1,450,894	-				+1.3
1,450,896	+				-0.3
1,450,896	+				+1.0
1,450,896	+				-1.8
1,450,896	+				+0.5
1,450,896	+				-1.6
1,450,897	-				-0.6
1,450,897	-				-1.9
1,450,897	-				+0.2
1,450,897	-				-1.1
1,450,897	-				-1.4
1,450,897	-				+2.1
1,450,897	-				+2.3
1,450,897	-				-2.1
1,450,909	+				+1.5
1,450,909	+				-1.2
1,450,909	+				+2.8
1,450,909	+				-0.4
1,450,909	+				+1.0
1,450,910	-				-0.2
1,450,910	-				+2.8
1,450,910	-				+0.7
1,450,910	-				+1.5
1,451,000	+				-0.7
1,451,000	+				-1.4
1,451,000	+				-0.9
1,451,000	+				-0.6
1,451,000	+				-0.2
1,451,000	+				-0.9
1,451,001	-				-0.5
1,451,001	-				-2.4
1,451,001	-				-0.9
1,451,004	+				-0.3
1,451,004	+				-2.1
1,451,004	+				-0.1
1,451,005	-				-0.3
1,451,005	-				-1.7
1,451,005	-				-0.5
1,451,077	+				-0.6
1,451,127	+				-0.4
1,451,127	+				+0.3
1,451,127	+				+0.5
1,451,128	-				-1.5
1,451,128	-				-1.6
1,451,155	+				+0.0
1,451,155	+				+1.1
1,451,180	+		IAI47_06905	0.13	-0.7
1,451,180	+		IAI47_06905	0.13	+1.5
1,451,202	+		IAI47_06905	0.17	-2.4
1,451,202	+		IAI47_06905	0.17	+1.3
1,451,240	+		IAI47_06905	0.22	-0.9
1,451,240	+		IAI47_06905	0.22	+1.6
1,451,240	+		IAI47_06905	0.22	+1.5
1,451,240	+		IAI47_06905	0.22	+0.9
1,451,240	+		IAI47_06905	0.22	+0.7
1,451,240	+		IAI47_06905	0.22	+0.4
1,451,241	-		IAI47_06905	0.23	-0.6
1,451,241	-		IAI47_06905	0.23	-1.2
1,451,241	-		IAI47_06905	0.23	+0.6
1,451,241	-		IAI47_06905	0.23	-0.9
1,451,241	-		IAI47_06905	0.23	-0.5
1,451,243	+		IAI47_06905	0.23	+1.7
1,451,243	+		IAI47_06905	0.23	-0.9
1,451,243	+		IAI47_06905	0.23	+1.8
1,451,244	-		IAI47_06905	0.23	-1.6
1,451,244	-		IAI47_06905	0.23	+0.6
1,451,244	-		IAI47_06905	0.23	+0.7
1,451,244	-		IAI47_06905	0.23	-2.2
1,451,281	+		IAI47_06905	0.29	-1.5
1,451,281	+		IAI47_06905	0.29	-1.0
1,451,282	-		IAI47_06905	0.29	-1.2
1,451,291	+		IAI47_06905	0.30	-1.6
1,451,291	+		IAI47_06905	0.30	-0.3
1,451,291	+		IAI47_06905	0.30	-0.3
1,451,292	-		IAI47_06905	0.31	-1.5
1,451,378	+		IAI47_06905	0.44	-1.8
1,451,378	+		IAI47_06905	0.44	+0.8
1,451,379	-		IAI47_06905	0.44	+0.0
1,451,384	+		IAI47_06905	0.45	-0.1
1,451,384	+		IAI47_06905	0.45	-1.2
1,451,384	+		IAI47_06905	0.45	+1.5
1,451,384	+		IAI47_06905	0.45	+0.8
1,451,385	-		IAI47_06905	0.45	+2.0
1,451,385	-		IAI47_06905	0.45	-0.8
1,451,440	+		IAI47_06905	0.54	-1.3
1,451,491	+		IAI47_06905	0.62	+0.2
1,451,524	+		IAI47_06905	0.67	+1.9
1,451,524	+		IAI47_06905	0.67	-0.3
1,451,524	+		IAI47_06905	0.67	+0.2
1,451,524	+		IAI47_06905	0.67	-0.1
1,451,525	-		IAI47_06905	0.67	-2.1
1,451,542	+		IAI47_06905	0.69	-0.6
1,451,542	+		IAI47_06905	0.69	-0.1
1,451,597	+		IAI47_06905	0.78	-2.2
1,451,598	-		IAI47_06905	0.78	-1.9
1,451,632	+		IAI47_06905	0.83	-1.1
1,451,632	+		IAI47_06905	0.83	-0.6
1,451,651	+		IAI47_06905	0.86	+0.7
1,451,702	-				-1.3
1,451,796	-				+0.3
1,451,801	+				-0.7
1,451,801	+				-0.7
1,451,801	+				+0.7
1,451,801	+				-1.1
1,451,801	+				+0.2
1,451,802	-				+0.4
1,451,802	-				-2.2
1,451,802	-				+0.7
1,451,802	-				+0.2
1,451,802	-				-1.3
1,451,904	+		IAI47_06910	0.14	-1.4
1,451,905	-		IAI47_06910	0.14	+0.4
1,451,935	-		IAI47_06910	0.20	-1.9
1,452,186	+		IAI47_06910	0.63	-0.2
1,452,222	+		IAI47_06910	0.69	-1.1
1,452,222	+		IAI47_06910	0.69	-0.6
1,452,222	+		IAI47_06910	0.69	-1.9
1,452,239	-		IAI47_06910	0.72	-1.1
1,452,239	-		IAI47_06910	0.72	+1.1
1,452,239	-		IAI47_06910	0.72	-0.4
1,452,276	+		IAI47_06910	0.78	-0.2
1,452,277	-		IAI47_06910	0.78	+1.7
1,452,277	-		IAI47_06910	0.78	-1.6
1,452,331	+		IAI47_06910	0.88	-1.4
1,452,331	+		IAI47_06910	0.88	+0.6
1,452,331	+		IAI47_06910	0.88	-0.3
1,452,331	+		IAI47_06910	0.88	-2.5
1,452,331	+		IAI47_06910	0.88	-1.1
1,452,331	+		IAI47_06910	0.88	-0.8
1,452,331	+		IAI47_06910	0.88	-1.5
1,452,331	+		IAI47_06910	0.88	+0.5
1,452,332	-		IAI47_06910	0.88	-2.0
1,452,332	-		IAI47_06910	0.88	+0.2
1,452,333	+		IAI47_06910	0.88	-1.6
1,452,334	-		IAI47_06910	0.88	+0.6
1,452,356	-				-1.8
1,452,413	+				+0.7
1,452,413	+				+0.5
1,452,413	+				-2.1
1,452,413	+				-0.8
1,452,413	+				+1.6
1,452,414	-				-0.7
1,452,414	-				-1.5
1,452,414	-				-2.1
1,452,414	-				-1.5
1,452,428	+				-0.6
1,452,428	+				-1.3
1,452,461	+				+1.5
1,452,514	+				-3.1
1,452,514	+				-1.4
1,452,514	+				-1.4
1,452,514	+				-0.5
1,452,514	+				-0.2
1,452,514	+				-0.7
1,452,514	+				-3.3
1,452,514	+				-0.4
1,452,514	+				-1.8
1,452,514	+				-0.1
1,452,514	+				+0.7
1,452,515	-				-3.3
1,452,515	-				+0.6
1,452,515	-				-0.5
1,452,515	-				-2.3
1,452,515	-				-2.1
1,452,515	-				+1.8
1,452,515	-				-2.5
1,452,515	-				-1.1
1,452,515	-				-0.3
1,452,515	-				-2.3
1,452,515	-				+1.1
1,452,515	-				-0.7
1,452,516	+				-0.9
1,452,516	+				+0.9
1,452,516	+				-0.9
1,452,516	+				+0.9
1,452,516	+				-1.0
1,452,516	+				-1.4
1,452,516	+				+0.5
1,452,516	+				-1.2
1,452,516	+				-0.9
1,452,517	-				+0.0
1,452,517	-				-1.1
1,452,517	-				-1.3
1,452,517	-				-1.6
1,452,517	-				-1.4
1,452,517	-				-1.1
1,452,517	-				-0.6
1,452,517	-				-2.1
1,452,517	-				-1.4
1,452,695	+		IAI47_06915	0.15	-1.1
1,452,695	+		IAI47_06915	0.15	-0.6
1,452,695	+		IAI47_06915	0.15	+0.8
1,452,695	+		IAI47_06915	0.15	-2.1
1,452,696	-		IAI47_06915	0.15	-2.9
1,452,696	-		IAI47_06915	0.15	-2.8
1,452,696	-		IAI47_06915	0.15	-1.6
1,452,696	-		IAI47_06915	0.15	-2.1
1,452,698	+		IAI47_06915	0.16	+2.1
1,452,699	-		IAI47_06915	0.16	-1.3
1,452,699	-		IAI47_06915	0.16	-0.7
1,452,743	+		IAI47_06915	0.18	-1.3
1,452,765	+		IAI47_06915	0.19	+1.6
1,452,853	-		IAI47_06915	0.24	-1.1
1,452,907	+		IAI47_06915	0.27	-0.4
1,452,907	+		IAI47_06915	0.27	-1.5
1,452,907	+		IAI47_06915	0.27	-2.2
1,452,908	-		IAI47_06915	0.27	-2.2
1,452,908	-		IAI47_06915	0.27	-2.2
1,452,908	-		IAI47_06915	0.27	-0.1
1,452,908	-		IAI47_06915	0.27	+0.9
1,452,930	+		IAI47_06915	0.28	-1.0
1,452,930	+		IAI47_06915	0.28	-0.8
1,452,930	+		IAI47_06915	0.28	-0.1
1,452,931	-		IAI47_06915	0.28	-3.6
1,452,931	-		IAI47_06915	0.28	-1.1
1,452,931	-		IAI47_06915	0.28	+0.6
1,453,088	+		IAI47_06915	0.37	+0.9
1,453,119	+		IAI47_06915	0.39	-0.1
1,453,176	+		IAI47_06915	0.42	-2.2
1,453,177	-		IAI47_06915	0.42	-0.7
1,453,177	-		IAI47_06915	0.42	-2.1
1,453,206	+		IAI47_06915	0.43	-2.6
1,453,206	+		IAI47_06915	0.43	-1.2
1,453,206	+		IAI47_06915	0.43	-2.2
1,453,207	-		IAI47_06915	0.43	-1.4
1,453,207	-		IAI47_06915	0.43	+0.1
1,453,207	-		IAI47_06915	0.43	-0.2
1,453,383	+		IAI47_06915	0.53	-0.6
1,453,383	+		IAI47_06915	0.53	+1.5
1,453,384	-		IAI47_06915	0.53	-0.3