Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_18835 and IAI47_18840 are separated by 2 nucleotides IAI47_18840 and IAI47_18845 overlap by 37 nucleotides IAI47_18845 and IAI47_18850 are separated by 14 nucleotides
IAI47_18835: IAI47_18835 - membrane protein insertase YidC, at 4,014,988 to 4,016,634
_18835
IAI47_18840: IAI47_18840 - membrane protein insertion efficiency factor YidD, at 4,016,637 to 4,016,894
_18840
IAI47_18845: IAI47_18845 - ribonuclease P protein component, at 4,016,858 to 4,017,217
_18845
IAI47_18850: IAI47_18850 - 50S ribosomal protein L34, at 4,017,232 to 4,017,372
_18850
Position (kb)
4016
4017 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4016.742 kb on + strand, within IAI47_18840 at 4016.743 kb on - strand, within IAI47_18840 at 4016.743 kb on - strand, within IAI47_18840 at 4016.761 kb on - strand, within IAI47_18840 at 4016.839 kb on + strand, within IAI47_18840 at 4016.839 kb on + strand, within IAI47_18840 at 4016.839 kb on + strand, within IAI47_18840 at 4016.840 kb on - strand, within IAI47_18840 at 4016.840 kb on - strand, within IAI47_18840 at 4017.515 kb on + strand at 4017.515 kb on + strand at 4017.515 kb on + strand at 4017.515 kb on + strand at 4017.516 kb on - strand at 4017.516 kb on - strand at 4017.534 kb on + strand at 4017.534 kb on + strand at 4017.534 kb on + strand at 4017.534 kb on + strand at 4017.534 kb on + strand at 4017.534 kb on + strand at 4017.534 kb on + strand at 4017.589 kb on + strand at 4017.589 kb on + strand at 4017.589 kb on + strand at 4017.589 kb on + strand at 4017.590 kb on - strand at 4017.590 kb on - strand at 4017.590 kb on - strand at 4017.590 kb on - strand at 4017.591 kb on + strand at 4017.591 kb on + strand at 4017.592 kb on - strand at 4017.605 kb on + strand at 4017.606 kb on - strand at 4017.631 kb on + strand at 4017.632 kb on - strand at 4017.632 kb on - strand at 4017.632 kb on - strand at 4017.671 kb on + strand at 4017.671 kb on + strand at 4017.691 kb on + strand at 4017.691 kb on + strand at 4017.691 kb on + strand at 4017.691 kb on + strand at 4017.691 kb on + strand at 4017.691 kb on + strand at 4017.692 kb on - strand at 4017.692 kb on - strand at 4017.692 kb on - strand at 4017.692 kb on - strand at 4017.692 kb on - strand at 4017.735 kb on + strand at 4017.782 kb on + strand at 4017.783 kb on - strand at 4017.783 kb on - strand at 4017.783 kb on - strand at 4017.783 kb on - strand at 4017.814 kb on + strand at 4017.814 kb on + strand at 4017.871 kb on + strand at 4017.892 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 remove 4,016,742 + IAI47_18840 0.41 -0.4 4,016,743 - IAI47_18840 0.41 -1.0 4,016,743 - IAI47_18840 0.41 -0.3 4,016,761 - IAI47_18840 0.48 -0.8 4,016,839 + IAI47_18840 0.78 -1.1 4,016,839 + IAI47_18840 0.78 +0.5 4,016,839 + IAI47_18840 0.78 -0.4 4,016,840 - IAI47_18840 0.79 -0.7 4,016,840 - IAI47_18840 0.79 +2.8 4,017,515 + +0.2 4,017,515 + +0.6 4,017,515 + +0.2 4,017,515 + +1.0 4,017,516 - -0.8 4,017,516 - +0.8 4,017,534 + -0.7 4,017,534 + +1.2 4,017,534 + +0.6 4,017,534 + +0.7 4,017,534 + +2.2 4,017,534 + -1.0 4,017,534 + -0.2 4,017,589 + -1.4 4,017,589 + -0.8 4,017,589 + +0.8 4,017,589 + +0.2 4,017,590 - -2.5 4,017,590 - +0.3 4,017,590 - -0.4 4,017,590 - -0.4 4,017,591 + +0.6 4,017,591 + +0.3 4,017,592 - -1.5 4,017,605 + +1.8 4,017,606 - +0.5 4,017,631 + +0.2 4,017,632 - +0.3 4,017,632 - -0.9 4,017,632 - +1.2 4,017,671 + +0.8 4,017,671 + -0.1 4,017,691 + -1.1 4,017,691 + -1.3 4,017,691 + +0.9 4,017,691 + +1.6 4,017,691 + -0.1 4,017,691 + +0.3 4,017,692 - -1.5 4,017,692 - +0.4 4,017,692 - +0.9 4,017,692 - +1.7 4,017,692 - -0.6 4,017,735 + -0.1 4,017,782 + +2.5 4,017,783 - +0.2 4,017,783 - +1.3 4,017,783 - -0.2 4,017,783 - +0.2 4,017,814 + -0.2 4,017,814 + +0.1 4,017,871 + -1.4 4,017,892 + +0.6
Or see this region's nucleotide sequence