Strain Fitness in Pantoea sp. MT58 around IAI47_17440

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,692,728	-		IAI47_17430	0.71	-1.4
3,692,728	-		IAI47_17430	0.71	-0.8
3,692,803	+		IAI47_17430	0.83	+0.5
3,692,804	-		IAI47_17430	0.83	-0.8
3,692,804	-		IAI47_17430	0.83	-0.7
3,692,813	+		IAI47_17430	0.84	-0.4
3,692,813	+		IAI47_17430	0.84	-0.6
3,692,813	+		IAI47_17430	0.84	-0.8
3,692,813	+		IAI47_17430	0.84	+1.4
3,692,813	+		IAI47_17430	0.84	+1.2
3,692,814	-		IAI47_17430	0.85	-2.0
3,692,814	-		IAI47_17430	0.85	+2.2
3,692,814	-		IAI47_17430	0.85	-1.3
3,692,814	-		IAI47_17430	0.85	-0.6
3,692,821	+		IAI47_17430	0.86	-0.4
3,692,822	-		IAI47_17430	0.86	+0.4
3,692,842	+		IAI47_17430	0.89	+2.7
3,692,901	+				-0.5
3,692,901	+				+0.2
3,692,901	+				-1.0
3,692,901	+				+2.2
3,692,902	-				+0.2
3,692,902	-				+1.8
3,692,902	-				-0.5
3,692,902	-				+0.5
3,692,929	+				+0.2
3,692,929	+				-0.3
3,692,929	+				+0.9
3,692,929	+				+3.2
3,692,929	+				-1.0
3,692,929	+				-0.2
3,692,929	+				+0.8
3,692,929	+				+1.1
3,692,930	-				+0.9
3,692,930	-				-0.5
3,692,930	-				+0.5
3,693,007	-				-1.5
3,693,031	-		IAI47_17435	0.12	-2.1
3,693,035	+		IAI47_17435	0.12	-0.5
3,693,035	+		IAI47_17435	0.12	+3.2
3,693,035	+		IAI47_17435	0.12	-1.8
3,693,035	+		IAI47_17435	0.12	+1.1
3,693,036	-		IAI47_17435	0.12	+0.7
3,693,036	-		IAI47_17435	0.12	-0.2
3,693,036	-		IAI47_17435	0.12	+0.7
3,693,036	-		IAI47_17435	0.12	-1.2
3,693,036	-		IAI47_17435	0.12	-0.8
3,693,036	-		IAI47_17435	0.12	-1.7
3,693,053	+		IAI47_17435	0.14	-0.7
3,693,095	+		IAI47_17435	0.20	-0.3
3,693,095	+		IAI47_17435	0.20	-1.7
3,693,095	+		IAI47_17435	0.20	+1.0
3,693,096	-		IAI47_17435	0.20	+1.6
3,693,096	-		IAI47_17435	0.20	+0.8
3,693,096	-		IAI47_17435	0.20	-1.3
3,693,096	-		IAI47_17435	0.20	-1.0
3,693,299	+		IAI47_17435	0.46	+0.1
3,693,300	-		IAI47_17435	0.46	-1.0
3,693,313	+		IAI47_17435	0.47	+2.1
3,693,314	-		IAI47_17435	0.48	-1.2
3,693,387	+		IAI47_17435	0.57	-1.1
3,693,387	+		IAI47_17435	0.57	+1.2
3,693,387	+		IAI47_17435	0.57	+0.4
3,693,388	-		IAI47_17435	0.57	-2.1
3,693,388	-		IAI47_17435	0.57	+0.1
3,693,404	+		IAI47_17435	0.59	+0.8
3,693,453	+		IAI47_17435	0.65	-0.2
3,693,454	-		IAI47_17435	0.65	+2.2
3,693,473	+		IAI47_17435	0.68	+3.7
3,693,501	+		IAI47_17435	0.71	-1.9
3,693,501	+		IAI47_17435	0.71	+0.4
3,693,502	-		IAI47_17435	0.72	+0.1
3,693,502	-		IAI47_17435	0.72	-0.8
3,693,517	-		IAI47_17435	0.73	+1.1
3,693,562	+		IAI47_17435	0.79	+0.1
3,693,562	+		IAI47_17435	0.79	+0.9
3,693,626	+		IAI47_17435	0.87	-1.2
3,693,627	-		IAI47_17435	0.87	+0.5
3,693,666	+				+0.6
3,693,667	-				+0.0
3,693,710	+				+0.8
3,693,710	+				-0.3
3,693,710	+				+1.2
3,693,710	+				-1.7
3,693,710	+				+0.0
3,693,710	+				-0.4
3,693,710	+				-0.1
3,693,711	-				-0.0
3,693,711	-				+1.1
3,693,711	-				+0.4
3,693,719	+				-0.1
3,693,719	+				+0.6
3,693,719	+				-2.5
3,693,720	-				-0.4
3,693,727	+				-0.3
3,693,727	+				-0.4
3,693,727	+				-0.6
3,693,727	+				+0.9
3,693,727	+				-0.4
3,693,727	+				-1.4
3,693,728	-				+0.6
3,693,728	-				-0.5
3,693,728	-				-0.8
3,693,728	-				+0.8
3,693,785	+				+0.5
3,693,785	+				-0.8
3,693,785	+				-1.2
3,693,785	+				+0.2
3,693,785	+				-1.5
3,693,785	+				-1.8
3,693,785	+				-1.3
3,693,785	+				+0.4
3,693,785	+				-1.1
3,693,786	-				-0.5
3,693,786	-				-4.0
3,693,786	-				-0.6
3,693,786	-				-0.5
3,693,786	-				+0.8
3,693,786	-				+0.3
3,693,786	-				-0.2
3,693,786	-				+1.8
3,693,786	-				+0.2
3,693,786	-				-1.1
3,693,789	+				+0.6
3,693,789	+				+0.4
3,693,789	+				+0.2
3,693,789	+				-2.3
3,693,790	-				+0.5
3,693,790	-				-0.0
3,693,790	-				-0.4
3,693,817	+				-0.4
3,693,818	-				+0.5
3,693,818	-				-2.0
3,693,840	+				-0.4
3,693,841	-				-0.1
3,693,845	+				+1.5
3,693,845	+				-0.9
3,693,845	+				+1.0
3,693,846	-				-1.1
3,693,846	-				+0.2
3,693,864	+				-0.0
3,693,864	+				+0.6
3,693,864	+				-1.9
3,693,916	+				-2.0
3,693,916	+				-1.9
3,693,916	+				+2.8
3,693,916	+				+1.5
3,693,916	+				-1.4
3,693,916	+				-0.1
3,693,916	+				+1.1
3,693,916	+				-0.8
3,693,916	+				-1.1
3,693,916	+				+0.5
3,693,916	+				+0.5
3,693,916	+				-0.2
3,693,916	+				-2.8
3,693,916	+				-1.1
3,693,916	+				+2.8
3,693,916	+				-1.4
3,693,916	+				+1.2
3,693,917	-				-0.9
3,693,917	-				+0.6
3,693,917	-				-0.2
3,693,917	-				+0.9
3,693,917	-				-2.3
3,693,917	-				-0.7
3,693,917	-				-0.1
3,693,917	-				-1.5
3,693,917	-				-2.1
3,693,917	-				-0.9
3,693,917	-				-0.1
3,693,917	-				-0.7
3,693,917	-				-1.6
3,693,917	-				-0.5
3,693,917	-				-1.2
3,693,917	-				+0.9
3,693,917	-				+0.3
3,694,019	+		IAI47_17440	0.12	+1.3
3,694,019	+		IAI47_17440	0.12	-0.4
3,694,019	+		IAI47_17440	0.12	-0.3
3,694,019	+		IAI47_17440	0.12	+1.1
3,694,019	+		IAI47_17440	0.12	+1.1
3,694,020	-		IAI47_17440	0.12	-1.7
3,694,020	-		IAI47_17440	0.12	-0.2
3,694,020	-		IAI47_17440	0.12	-2.4
3,694,020	-		IAI47_17440	0.12	-0.4
3,694,020	-		IAI47_17440	0.12	-1.6
3,694,020	-		IAI47_17440	0.12	+0.7
3,694,020	-		IAI47_17440	0.12	-1.5
3,694,020	-		IAI47_17440	0.12	+0.1
3,694,143	-		IAI47_17440	0.18	+0.0
3,694,143	-		IAI47_17440	0.18	-0.1
3,694,143	-		IAI47_17440	0.18	+0.8
3,694,143	-		IAI47_17440	0.18	+0.3
3,694,165	+		IAI47_17440	0.18	-0.5
3,694,165	+		IAI47_17440	0.18	+0.6
3,694,165	+		IAI47_17440	0.18	-0.5
3,694,165	+		IAI47_17440	0.18	+0.9
3,694,165	+		IAI47_17440	0.18	+0.0
3,694,166	-		IAI47_17440	0.18	+0.0
3,694,166	-		IAI47_17440	0.18	-0.9
3,694,166	-		IAI47_17440	0.18	-0.6
3,694,185	+		IAI47_17440	0.19	-0.2
3,694,186	-		IAI47_17440	0.19	+0.3
3,694,186	-		IAI47_17440	0.19	-0.5
3,694,186	-		IAI47_17440	0.19	+1.2
3,694,188	+		IAI47_17440	0.19	+0.8
3,694,188	+		IAI47_17440	0.19	+1.3
3,694,188	+		IAI47_17440	0.19	+0.3
3,694,188	+		IAI47_17440	0.19	-0.3
3,694,188	+		IAI47_17440	0.19	-0.1
3,694,189	-		IAI47_17440	0.19	-0.6
3,694,189	-		IAI47_17440	0.19	-1.0
3,694,217	+		IAI47_17440	0.21	-1.5
3,694,218	-		IAI47_17440	0.21	-0.1
3,694,374	-		IAI47_17440	0.27	+0.3
3,694,433	+		IAI47_17440	0.30	+0.1
3,694,433	+		IAI47_17440	0.30	-0.5
3,694,433	+		IAI47_17440	0.30	+0.9
3,694,433	+		IAI47_17440	0.30	-1.1
3,694,434	-		IAI47_17440	0.30	-0.3
3,694,434	-		IAI47_17440	0.30	+0.2
3,694,434	-		IAI47_17440	0.30	+0.5
3,694,434	-		IAI47_17440	0.30	-0.3
3,694,434	-		IAI47_17440	0.30	-0.5
3,694,434	-		IAI47_17440	0.30	-0.9
3,694,437	+		IAI47_17440	0.30	+1.9
3,694,437	+		IAI47_17440	0.30	+0.3
3,694,438	-		IAI47_17440	0.30	+0.2
3,694,555	+		IAI47_17440	0.35	+1.3
3,694,556	-		IAI47_17440	0.35	+0.5
3,694,632	+		IAI47_17440	0.38	+0.1
3,694,632	+		IAI47_17440	0.38	-0.5
3,694,633	-		IAI47_17440	0.38	-1.0
3,694,633	-		IAI47_17440	0.38	-0.8
3,694,633	-		IAI47_17440	0.38	+0.8
3,694,637	+		IAI47_17440	0.38	+0.1
3,694,637	+		IAI47_17440	0.38	-0.4
3,694,637	+		IAI47_17440	0.38	+0.1
3,694,637	+		IAI47_17440	0.38	+0.8
3,694,637	+		IAI47_17440	0.38	-0.5
3,694,637	+		IAI47_17440	0.38	-0.2
3,694,637	+		IAI47_17440	0.38	-0.7
3,694,638	-		IAI47_17440	0.38	-0.5
3,694,638	-		IAI47_17440	0.38	-0.1
3,694,638	-		IAI47_17440	0.38	-0.4
3,694,638	-		IAI47_17440	0.38	-0.1
3,694,646	-		IAI47_17440	0.39	+0.1
3,694,646	-		IAI47_17440	0.39	-0.3
3,694,646	-		IAI47_17440	0.39	+0.5
3,694,700	+		IAI47_17440	0.41	-0.3
3,694,702	+		IAI47_17440	0.41	-0.5
3,694,702	+		IAI47_17440	0.41	-2.5
3,694,702	+		IAI47_17440	0.41	+0.8
3,694,702	+		IAI47_17440	0.41	+1.0
3,694,703	-		IAI47_17440	0.41	-0.1
3,694,703	-		IAI47_17440	0.41	-0.7
3,694,703	-		IAI47_17440	0.41	+0.9
3,694,703	-		IAI47_17440	0.41	-0.6
3,694,777	+		IAI47_17440	0.44	+0.3
3,694,777	+		IAI47_17440	0.44	-0.4
3,694,777	+		IAI47_17440	0.44	-1.5
3,694,777	+		IAI47_17440	0.44	-0.7
3,694,778	-		IAI47_17440	0.44	+1.8
3,694,778	-		IAI47_17440	0.44	-0.4
3,694,778	-		IAI47_17440	0.44	-0.6
3,694,778	-		IAI47_17440	0.44	-1.3
3,694,792	+		IAI47_17440	0.45	+0.5
3,694,884	-		IAI47_17440	0.49	-1.0
3,694,884	-		IAI47_17440	0.49	+0.7
3,694,897	+		IAI47_17440	0.49	-0.4
3,694,897	+		IAI47_17440	0.49	-1.2
3,694,897	+		IAI47_17440	0.49	-1.1
3,694,897	+		IAI47_17440	0.49	-0.7
3,694,897	+		IAI47_17440	0.49	+1.8
3,694,898	-		IAI47_17440	0.49	+0.6
3,694,898	-		IAI47_17440	0.49	-1.6
3,694,898	-		IAI47_17440	0.49	+0.4
3,694,898	-		IAI47_17440	0.49	-1.3
3,694,936	-		IAI47_17440	0.51	-0.3
3,695,052	+		IAI47_17440	0.56	-2.0
3,695,052	+		IAI47_17440	0.56	+1.0
3,695,053	-		IAI47_17440	0.56	+1.2
3,695,053	-		IAI47_17440	0.56	+1.1
3,695,099	-		IAI47_17440	0.58	+0.1
3,695,183	-		IAI47_17440	0.61	-1.2
3,695,183	-		IAI47_17440	0.61	-0.9
3,695,183	-		IAI47_17440	0.61	+1.9
3,695,206	+		IAI47_17440	0.62	-1.8
3,695,242	+		IAI47_17440	0.64	-0.5
3,695,242	+		IAI47_17440	0.64	-2.4
3,695,242	+		IAI47_17440	0.64	+1.0
3,695,243	-		IAI47_17440	0.64	-1.5
3,695,267	+		IAI47_17440	0.65	-0.6
3,695,268	-		IAI47_17440	0.65	+0.5
3,695,281	+		IAI47_17440	0.65	+0.5
3,695,281	+		IAI47_17440	0.65	+0.2
3,695,282	-		IAI47_17440	0.65	-0.9
3,695,282	-		IAI47_17440	0.65	-0.5
3,695,282	-		IAI47_17440	0.65	-1.5
3,695,356	+		IAI47_17440	0.69	-2.8
3,695,356	+		IAI47_17440	0.69	-0.6
3,695,357	-		IAI47_17440	0.69	+0.2
3,695,357	-		IAI47_17440	0.69	-0.8
3,695,362	+		IAI47_17440	0.69	+0.1
3,695,362	+		IAI47_17440	0.69	+0.6
3,695,362	+		IAI47_17440	0.69	+1.2
3,695,362	+		IAI47_17440	0.69	+0.7
3,695,363	-		IAI47_17440	0.69	-0.0
3,695,363	-		IAI47_17440	0.69	+0.3
3,695,363	-		IAI47_17440	0.69	-1.0
3,695,363	-		IAI47_17440	0.69	-0.3
3,695,396	+		IAI47_17440	0.70	+0.6
3,695,396	+		IAI47_17440	0.70	+0.1
3,695,396	+		IAI47_17440	0.70	-1.0
3,695,396	+		IAI47_17440	0.70	+1.1
3,695,396	+		IAI47_17440	0.70	+1.9
3,695,397	-		IAI47_17440	0.70	-0.4
3,695,485	+		IAI47_17440	0.74	+0.7
3,695,485	+		IAI47_17440	0.74	+0.6
3,695,485	+		IAI47_17440	0.74	+0.4
3,695,486	-		IAI47_17440	0.74	+0.6
3,695,558	+		IAI47_17440	0.77	-0.3
3,695,582	+		IAI47_17440	0.78	+1.3
3,695,583	-		IAI47_17440	0.78	-1.7
3,695,585	+		IAI47_17440	0.78	+0.5
3,695,585	+		IAI47_17440	0.78	-0.5
3,695,585	+		IAI47_17440	0.78	+0.1
3,695,608	+		IAI47_17440	0.79	-0.1
3,695,636	-		IAI47_17440	0.80	+1.2
3,695,732	-		IAI47_17440	0.84	+0.1
3,695,732	-		IAI47_17440	0.84	-0.7
3,695,784	+		IAI47_17440	0.87	-1.9
3,695,791	+		IAI47_17440	0.87	+0.5
3,695,791	+		IAI47_17440	0.87	+2.5
3,695,868	+				+0.7
3,695,869	-				-0.7
3,695,869	-				-0.3
3,695,869	-				-1.5
3,695,948	+				+1.5
3,695,948	+				-1.0
3,695,948	+				-0.1
3,695,948	+				-0.4
3,695,968	-				-0.3
3,695,980	+				+0.7
3,696,052	-				-1.9
3,696,163	+				+2.0
3,696,164	-				+0.3
3,696,164	-				+0.8
3,696,164	-				-1.5
3,696,171	-				-1.3
3,696,201	+				-0.1
3,696,201	+				-2.4
3,696,201	+				-1.5
3,696,201	+				-1.0
3,696,201	+				-0.2
3,696,201	+				+0.8
3,696,201	+				+0.2
3,696,201	+				+1.8
3,696,201	+				-0.7
3,696,201	+				-1.1
3,696,201	+				-0.7
3,696,201	+				-1.3
3,696,202	-				-1.9
3,696,202	-				-0.1
3,696,202	-				-2.7
3,696,202	-				-0.1
3,696,202	-				+0.6
3,696,202	-				-0.1
3,696,202	-				-1.2
3,696,202	-				+0.0
3,696,202	-				+1.1
3,696,202	-				+0.5
3,696,202	-				+1.4
3,696,202	-				-0.5
3,696,202	-				-0.4
3,696,202	-				-0.7
3,696,202	-				+0.5
3,696,202	-				+1.9
3,696,202	-				-2.5
3,696,244	+				+1.4
3,696,262	+				+0.8
3,696,309	+				+0.6
3,696,309	+				-2.0
3,696,310	-				+0.7
3,696,310	-				+0.8
3,696,343	-				-0.0
3,696,394	+		IAI47_17445	0.11	+0.4
3,696,395	-		IAI47_17445	0.11	+0.2
3,696,395	-		IAI47_17445	0.11	+0.4
3,696,577	+		IAI47_17445	0.18	-1.7
3,696,584	-		IAI47_17445	0.18	+0.3
3,696,622	+		IAI47_17445	0.20	+0.1
3,696,622	+		IAI47_17445	0.20	+0.3
3,696,622	+		IAI47_17445	0.20	+1.2
3,696,645	+		IAI47_17445	0.20	-1.2
3,696,645	+		IAI47_17445	0.20	+1.8
3,696,645	+		IAI47_17445	0.20	+0.2
3,696,645	+		IAI47_17445	0.20	+1.1
3,696,645	+		IAI47_17445	0.20	-1.2
3,696,645	+		IAI47_17445	0.20	+1.0
3,696,645	+		IAI47_17445	0.20	+0.7
3,696,645	+		IAI47_17445	0.20	-1.2
3,696,645	+		IAI47_17445	0.20	-1.4
3,696,645	+		IAI47_17445	0.20	-0.4
3,696,646	-		IAI47_17445	0.21	-2.1
3,696,646	-		IAI47_17445	0.21	-0.1
3,696,705	+		IAI47_17445	0.23	-0.2
3,696,705	+		IAI47_17445	0.23	+1.0
3,696,705	+		IAI47_17445	0.23	+0.5
3,696,706	-		IAI47_17445	0.23	-0.8
3,696,715	+		IAI47_17445	0.23	-0.6
3,696,715	+		IAI47_17445	0.23	+0.0
3,696,715	+		IAI47_17445	0.23	+2.0
3,696,716	-		IAI47_17445	0.23	+0.2
3,696,719	+		IAI47_17445	0.23	+0.7
3,696,719	+		IAI47_17445	0.23	-0.8
3,696,720	-		IAI47_17445	0.23	+1.0
3,696,760	-		IAI47_17445	0.25	-1.0
3,696,760	-		IAI47_17445	0.25	+0.4
3,696,760	-		IAI47_17445	0.25	-0.6
3,696,788	+		IAI47_17445	0.26	-0.9
3,696,807	+		IAI47_17445	0.27	+3.9
3,696,826	+		IAI47_17445	0.27	+1.7
3,696,827	-		IAI47_17445	0.27	+0.4
3,696,827	-		IAI47_17445	0.27	-0.1
3,696,849	+		IAI47_17445	0.28	-0.2
3,696,850	-		IAI47_17445	0.28	+1.9
3,697,100	-		IAI47_17445	0.38	-0.8
3,697,100	-		IAI47_17445	0.38	-1.9