Strain Fitness in Pantoea sp. MT58 around IAI47_11710

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,482,876	+		IAI47_11705	0.54	+0.3
2,482,876	+		IAI47_11705	0.54	+1.5
2,482,876	+		IAI47_11705	0.54	-1.0
2,482,876	+		IAI47_11705	0.54	+0.7
2,482,876	+		IAI47_11705	0.54	+0.2
2,482,876	+		IAI47_11705	0.54	+0.4
2,482,877	-		IAI47_11705	0.54	-1.7
2,482,877	-		IAI47_11705	0.54	+0.9
2,483,018	-		IAI47_11705	0.63	+1.3
2,483,021	+		IAI47_11705	0.63	+0.4
2,483,021	+		IAI47_11705	0.63	-0.1
2,483,022	-		IAI47_11705	0.63	-0.5
2,483,032	+		IAI47_11705	0.64	-1.7
2,483,033	-		IAI47_11705	0.64	-0.6
2,483,072	+		IAI47_11705	0.67	+0.6
2,483,076	-		IAI47_11705	0.67	-0.7
2,483,076	-		IAI47_11705	0.67	+0.6
2,483,076	-		IAI47_11705	0.67	+1.9
2,483,095	+		IAI47_11705	0.68	-0.5
2,483,096	-		IAI47_11705	0.68	+0.4
2,483,133	+		IAI47_11705	0.71	+0.1
2,483,200	-		IAI47_11705	0.75	-1.1
2,483,277	+		IAI47_11705	0.80	-1.0
2,483,277	+		IAI47_11705	0.80	-2.6
2,483,277	+		IAI47_11705	0.80	-0.1
2,483,277	+		IAI47_11705	0.80	+0.9
2,483,401	+		IAI47_11705	0.88	-0.1
2,483,464	+				-1.4
2,483,464	+				-0.9
2,483,465	-				-2.0
2,483,465	-				+0.5
2,483,465	-				-0.7
2,483,475	+				-1.1
2,483,475	+				-2.0
2,483,475	+				-0.5
2,483,476	-				+0.4
2,483,476	-				-0.1
2,483,476	-				+0.0
2,483,476	-				+0.7
2,483,510	-				+0.6
2,483,523	+				-0.2
2,483,524	-				+0.9
2,483,534	+				-0.8
2,483,534	+				-1.4
2,483,535	-				+1.1
2,483,535	-				-0.0
2,483,571	+				+0.0
2,483,572	-				+0.2
2,483,606	+				+3.2
2,483,607	-				-1.3
2,483,607	-				-0.4
2,483,622	+				-0.0
2,483,625	+				-1.6
2,483,664	+				-0.0
2,483,695	-				+1.3
2,483,695	-				+1.0
2,483,715	+				-1.4
2,483,715	+				+1.4
2,483,715	+				-1.3
2,483,715	+				-0.9
2,483,715	+				+0.4
2,483,715	+				-0.8
2,483,716	-				+0.5
2,483,716	-				+1.3
2,483,720	-				+0.1
2,483,790	+				+1.4
2,483,791	-				+0.6
2,483,791	-				-0.2
2,483,826	+				+0.7
2,483,826	+				+0.1
2,483,826	+				+1.0
2,483,826	+				-0.3
2,483,826	+				+0.1
2,483,826	+				+0.4
2,483,827	-				+0.0
2,483,827	-				-1.5
2,483,827	-				-0.0
2,483,830	-				+0.6
2,483,869	-		IAI47_11710	0.10	-0.1
2,483,898	+		IAI47_11710	0.15	+0.8
2,483,898	+		IAI47_11710	0.15	-0.7
2,483,899	-		IAI47_11710	0.15	-2.1
2,483,899	-		IAI47_11710	0.15	+0.9
2,483,899	-		IAI47_11710	0.15	+0.1
2,483,960	+		IAI47_11710	0.26	-0.3
2,483,960	+		IAI47_11710	0.26	+0.1
2,483,960	+		IAI47_11710	0.26	-0.1
2,483,960	+		IAI47_11710	0.26	-0.4
2,483,961	-		IAI47_11710	0.26	+0.3
2,483,961	-		IAI47_11710	0.26	-0.1
2,483,961	-		IAI47_11710	0.26	-1.4
2,483,961	-		IAI47_11710	0.26	-0.7
2,483,961	-		IAI47_11710	0.26	-0.5
2,484,057	+		IAI47_11710	0.43	-1.2
2,484,107	+		IAI47_11710	0.52	+2.4
2,484,128	-		IAI47_11710	0.56	+1.6
2,484,142	+		IAI47_11710	0.59	-0.7
2,484,143	-		IAI47_11710	0.59	-0.4
2,484,217	+		IAI47_11710	0.72	-2.3
2,484,217	+		IAI47_11710	0.72	-0.1
2,484,218	-		IAI47_11710	0.72	+0.7
2,484,218	-		IAI47_11710	0.72	-0.7
2,484,218	-		IAI47_11710	0.72	+0.8
2,484,218	-		IAI47_11710	0.72	-0.7
2,484,219	+		IAI47_11710	0.72	-0.5
2,484,219	+		IAI47_11710	0.72	-0.1
2,484,219	+		IAI47_11710	0.72	-2.9
2,484,259	+		IAI47_11710	0.79	+0.1
2,484,259	+		IAI47_11710	0.79	-0.0
2,484,260	-		IAI47_11710	0.79	+1.4
2,484,260	-		IAI47_11710	0.79	-0.7
2,484,292	+		IAI47_11710	0.85	+0.0
2,484,292	+		IAI47_11710	0.85	-0.2
2,484,292	+		IAI47_11710	0.85	-0.9
2,484,292	+		IAI47_11710	0.85	+0.4
2,484,293	-		IAI47_11710	0.85	-1.0
2,484,293	-		IAI47_11710	0.85	-0.9
2,484,293	-		IAI47_11710	0.85	+0.1
2,484,347	-				+2.2
2,484,364	+				+0.7
2,484,470	+		IAI47_11715	0.15	-0.2
2,484,471	-		IAI47_11715	0.15	-0.7
2,484,471	-		IAI47_11715	0.15	-0.5
2,484,510	-		IAI47_11715	0.20	-1.6
2,484,548	+		IAI47_11715	0.25	+1.3
2,484,548	+		IAI47_11715	0.25	-1.2
2,484,549	-		IAI47_11715	0.26	+1.6
2,484,549	-		IAI47_11715	0.26	-0.4
2,484,551	-		IAI47_11715	0.26	+0.4
2,484,636	+		IAI47_11715	0.38	-0.5
2,484,712	-		IAI47_11715	0.48	-0.8
2,484,766	+		IAI47_11715	0.56	+2.4
2,484,766	+		IAI47_11715	0.56	-0.9
2,484,766	+		IAI47_11715	0.56	+0.6
2,484,787	+		IAI47_11715	0.58	+0.2
2,484,787	+		IAI47_11715	0.58	-0.2
2,484,787	+		IAI47_11715	0.58	-0.9
2,484,787	+		IAI47_11715	0.58	+1.7
2,484,787	+		IAI47_11715	0.58	-1.8
2,484,787	+		IAI47_11715	0.58	+1.7
2,484,788	-		IAI47_11715	0.59	+2.4
2,484,788	-		IAI47_11715	0.59	+0.8
2,484,788	-		IAI47_11715	0.59	+1.4
2,484,788	-		IAI47_11715	0.59	-0.2
2,484,909	+		IAI47_11715	0.75	-0.0
2,484,909	+		IAI47_11715	0.75	-0.5
2,484,962	-		IAI47_11715	0.83	+0.1
2,484,962	-		IAI47_11715	0.83	+1.4
2,484,992	+		IAI47_11715	0.87	+1.0
2,484,992	+		IAI47_11715	0.87	-0.3
2,484,993	-		IAI47_11715	0.87	-0.9
2,484,993	-		IAI47_11715	0.87	+0.7
2,484,993	-		IAI47_11715	0.87	-1.1
2,485,056	+				-1.5
2,485,057	-				-1.7
2,485,089	-				-2.6
2,485,104	+				-1.7
2,485,105	-				-0.1
2,485,252	+				-0.4
2,485,252	+				-0.5
2,485,255	+				+0.1
2,485,255	+				+0.9
2,485,255	+				+0.1
2,485,255	+				-0.1
2,485,256	-				+0.7
2,485,256	-				-0.1
2,485,256	-				-0.8
2,485,369	+		IAI47_11720	0.12	+0.6