Strain Fitness in Pantoea sp. MT58 around IAI47_21800

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
105,349	-		IAI47_21795	0.52	+2.4
105,349	-		IAI47_21795	0.52	-1.7
105,381	+		IAI47_21795	0.54	-0.4
105,381	+		IAI47_21795	0.54	-0.4
105,381	+		IAI47_21795	0.54	+1.1
105,381	+		IAI47_21795	0.54	+1.2
105,381	+		IAI47_21795	0.54	+0.8
105,382	-		IAI47_21795	0.54	+0.3
105,382	-		IAI47_21795	0.54	-0.3
105,382	-		IAI47_21795	0.54	-0.1
105,382	-		IAI47_21795	0.54	+1.1
105,392	+		IAI47_21795	0.55	+1.2
105,392	+		IAI47_21795	0.55	-0.7
105,392	+		IAI47_21795	0.55	+1.6
105,393	-		IAI47_21795	0.55	-0.1
105,393	-		IAI47_21795	0.55	+1.8
105,393	-		IAI47_21795	0.55	-0.3
105,410	-		IAI47_21795	0.56	+0.4
105,410	-		IAI47_21795	0.56	-0.2
105,427	-		IAI47_21795	0.58	+0.7
105,437	+		IAI47_21795	0.58	+0.5
105,438	-		IAI47_21795	0.58	-0.7
105,492	-		IAI47_21795	0.62	+0.3
105,545	+		IAI47_21795	0.66	-0.7
105,545	+		IAI47_21795	0.66	+0.2
105,545	+		IAI47_21795	0.66	-0.4
105,545	+		IAI47_21795	0.66	+0.1
105,546	-		IAI47_21795	0.66	-0.6
105,548	+		IAI47_21795	0.66	-0.9
105,548	+		IAI47_21795	0.66	+0.4
105,548	+		IAI47_21795	0.66	-0.8
105,548	+		IAI47_21795	0.66	-0.9
105,548	+		IAI47_21795	0.66	+0.8
105,549	-		IAI47_21795	0.66	-0.3
105,549	-		IAI47_21795	0.66	+0.6
105,549	-		IAI47_21795	0.66	-1.8
105,549	-		IAI47_21795	0.66	-0.5
105,549	-		IAI47_21795	0.66	-1.1
105,554	+		IAI47_21795	0.66	+0.8
105,555	-		IAI47_21795	0.66	+0.6
105,674	-		IAI47_21795	0.74	+0.1
105,674	-		IAI47_21795	0.74	-2.8
105,686	+		IAI47_21795	0.75	-0.1
105,686	+		IAI47_21795	0.75	-1.1
105,686	+		IAI47_21795	0.75	+0.8
105,687	-		IAI47_21795	0.75	-0.8
105,737	+		IAI47_21795	0.79	-0.5
105,737	+		IAI47_21795	0.79	+0.3
105,737	+		IAI47_21795	0.79	-1.7
105,738	-		IAI47_21795	0.79	-0.7
105,738	-		IAI47_21795	0.79	+0.1
105,738	-		IAI47_21795	0.79	+1.8
105,738	-		IAI47_21795	0.79	+0.2
105,857	+		IAI47_21795	0.87	+0.8
105,857	+		IAI47_21795	0.87	-1.1
105,857	+		IAI47_21795	0.87	+0.9
105,857	+		IAI47_21795	0.87	-0.6
105,857	+		IAI47_21795	0.87	+0.4
105,858	-		IAI47_21795	0.87	-0.9
105,858	-		IAI47_21795	0.87	-2.1
105,858	-		IAI47_21795	0.87	+0.5
105,858	-		IAI47_21795	0.87	-0.3
105,860	+		IAI47_21795	0.87	+1.0
105,860	+		IAI47_21795	0.87	-1.5
105,860	+		IAI47_21795	0.87	-1.5
105,860	+		IAI47_21795	0.87	+0.0
105,860	+		IAI47_21795	0.87	-1.2
105,860	+		IAI47_21795	0.87	-1.5
105,860	+		IAI47_21795	0.87	+0.3
105,861	-		IAI47_21795	0.87	-1.5
105,861	-		IAI47_21795	0.87	-0.9
105,861	-		IAI47_21795	0.87	-2.0
105,861	-		IAI47_21795	0.87	+0.4
105,861	-		IAI47_21795	0.87	+2.2
105,935	+				+1.5
105,935	+				+2.2
105,936	-				+2.5
105,936	-				-1.3
105,999	+				-2.8
105,999	+				-0.8
105,999	+				+0.0
106,000	-				+1.3
106,000	-				+0.1
106,000	-				+1.0
106,000	-				+0.7
106,000	-				+0.8
106,000	-				+0.8
106,002	+				+0.2
106,002	+				+0.7
106,003	-				+1.3
106,003	-				+2.0
106,003	-				+0.0
106,003	-				+0.2
106,003	-				-2.2
106,057	-				-0.4
106,067	+				-0.1
106,067	+				+0.9
106,071	-				+0.7
106,108	+				+1.5
106,108	+				-1.1
106,108	+				+0.8
106,108	+				-1.0
106,109	-				-0.7
106,109	-				-0.1
106,109	-				+0.6
106,109	-				+0.2
106,109	-				+0.4
106,131	+				-1.0
106,193	+				-0.3
106,206	-				-0.3
106,290	+				-1.4
106,298	+				-0.3
106,298	+				-0.5
106,298	+				+0.0
106,299	-				+2.0
106,299	-				+0.4
106,320	-				+0.0
106,326	+				-1.7
106,326	+				-1.3
106,326	+				+0.0
106,326	+				+0.5
106,326	+				+0.3
106,327	-				+0.8
106,335	+				-0.1
106,335	+				-2.3
106,336	-				+1.1
106,390	+				-0.7
106,391	-				+1.5
106,391	-				+1.8
106,432	+		IAI47_21800	0.15	-1.3
106,433	-		IAI47_21800	0.16	-0.8
106,530	+		IAI47_21800	0.33	+1.7
106,531	-		IAI47_21800	0.33	+1.8
106,531	-		IAI47_21800	0.33	-0.2
106,531	-		IAI47_21800	0.33	-0.6
106,555	+		IAI47_21800	0.37	+0.3
106,556	-		IAI47_21800	0.37	+0.5
106,556	-		IAI47_21800	0.37	-1.0
106,556	-		IAI47_21800	0.37	-1.9
106,556	-		IAI47_21800	0.37	+0.7
106,556	-		IAI47_21800	0.37	+1.3
106,568	+		IAI47_21800	0.39	-3.3
106,568	+		IAI47_21800	0.39	-1.1
106,568	+		IAI47_21800	0.39	+0.4
106,569	-		IAI47_21800	0.39	+0.9
106,569	-		IAI47_21800	0.39	-1.0
106,569	-		IAI47_21800	0.39	+0.9
106,569	-		IAI47_21800	0.39	+1.6
106,569	-		IAI47_21800	0.39	+1.3
106,569	-		IAI47_21800	0.39	-0.6
106,579	-		IAI47_21800	0.41	-0.1
106,621	+		IAI47_21800	0.49	+1.6
106,621	+		IAI47_21800	0.49	+1.0
106,621	+		IAI47_21800	0.49	+2.3
106,621	+		IAI47_21800	0.49	+0.6
106,621	+		IAI47_21800	0.49	-0.1
106,621	+		IAI47_21800	0.49	-0.3
106,622	-		IAI47_21800	0.49	-0.5
106,672	+		IAI47_21800	0.58	+3.9
106,672	+		IAI47_21800	0.58	-0.3
106,673	-		IAI47_21800	0.58	+0.7
106,673	-		IAI47_21800	0.58	+0.3
106,686	-		IAI47_21800	0.60	-1.1
106,736	+		IAI47_21800	0.69	+0.0
106,737	-		IAI47_21800	0.69	+2.2
106,811	+		IAI47_21800	0.82	+0.0
106,811	+		IAI47_21800	0.82	+0.2
106,811	+		IAI47_21800	0.82	-0.5
106,811	+		IAI47_21800	0.82	+0.4
106,812	-		IAI47_21800	0.82	+1.3
106,812	-		IAI47_21800	0.82	-0.4
106,815	+		IAI47_21800	0.83	+2.1
106,815	+		IAI47_21800	0.83	+0.4
106,815	+		IAI47_21800	0.83	+2.2
106,815	+		IAI47_21800	0.83	+2.5
106,815	+		IAI47_21800	0.83	+2.3
106,815	+		IAI47_21800	0.83	-1.6
106,816	-		IAI47_21800	0.83	+0.5
106,816	-		IAI47_21800	0.83	-0.3
106,816	-		IAI47_21800	0.83	+0.0
106,816	-		IAI47_21800	0.83	+0.6
106,820	+		IAI47_21800	0.84	+0.4
106,820	+		IAI47_21800	0.84	+0.9
106,918	+				-1.1
106,918	+				+0.5
106,919	-				+0.0
106,921	+				+1.0
106,921	+				+0.5
106,922	-				+1.1
106,922	-				+0.3
106,922	-				-0.6
106,922	-				-0.7
106,956	-				+0.2
106,963	+				-1.8
106,964	-				+1.2
106,964	-				-0.4
107,064	-				-1.3
107,132	+				-0.7
107,133	-				-0.5
107,133	-				-0.6
107,133	-				+0.6
107,133	-				-1.6
107,133	-				+1.0
107,174	+				+2.5
107,174	+				-0.3
107,174	+				+0.8
107,175	-				-0.0
107,175	-				-0.2
107,175	-				-2.2
107,175	-				-1.0
107,175	-				+0.3
107,175	-				-0.9
107,175	-				+1.5
107,175	-				-2.6
107,175	-				+1.9
107,236	-		IAI47_21805	0.10	-1.3
107,268	+		IAI47_21805	0.16	+0.6
107,268	+		IAI47_21805	0.16	+1.4
107,269	-		IAI47_21805	0.16	+0.0
107,269	-		IAI47_21805	0.16	+1.8
107,269	-		IAI47_21805	0.16	-0.5
107,304	+		IAI47_21805	0.22	-2.1
107,304	+		IAI47_21805	0.22	+0.5
107,304	+		IAI47_21805	0.22	-0.3
107,304	+		IAI47_21805	0.22	-0.1
107,304	+				-1.0
107,304	+		IAI47_21805	0.22	-1.2
107,304	+		IAI47_21805	0.22	+1.8
107,304	+		IAI47_21805	0.22	+0.6
107,305	-		IAI47_21805	0.22	-0.3
107,305	-		IAI47_21805	0.22	+1.3
107,305	-		IAI47_21805	0.22	-1.6
107,305	-		IAI47_21805	0.22	-0.3
107,309	+		IAI47_21805	0.23	+0.7
107,309	+		IAI47_21805	0.23	-1.7
107,385	-		IAI47_21805	0.37	+1.1
107,385	-		IAI47_21805	0.37	-1.3
107,385	-		IAI47_21805	0.37	+0.0
107,385	-		IAI47_21805	0.37	-1.3
107,486	+		IAI47_21805	0.54	+1.4
107,487	-		IAI47_21805	0.54	+0.2
107,487	-		IAI47_21805	0.54	-0.4
107,487	-		IAI47_21805	0.54	-1.5
107,517	+		IAI47_21805	0.60	-0.7
107,517	+		IAI47_21805	0.60	-0.7
107,518	-		IAI47_21805	0.60	+0.0
107,518	-		IAI47_21805	0.60	-2.7
107,572	-		IAI47_21805	0.69	-0.3
107,659	+		IAI47_21805	0.85	+0.5
107,660	-		IAI47_21805	0.85	-1.2
107,660	-		IAI47_21805	0.85	-0.5
107,704	+				+0.5
107,704	+				-0.6
107,705	-				-0.7
107,705	-				+0.4
107,705	-				+0.1
107,727	+				+1.0
107,807	+				+0.4
107,807	+				+1.8
107,807	+				+0.9
107,807	+				-0.8
107,849	+				+0.7
107,850	-				+1.2
107,850	-				-0.1