Strain Fitness in Pantoea sp. MT58 around IAI47_07970

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,685,618	+		IAI47_07965	0.41	-0.3
1,685,636	-		IAI47_07965	0.44	-0.2
1,685,687	+		IAI47_07965	0.52	+1.1
1,685,687	+		IAI47_07965	0.52	+0.3
1,685,699	+		IAI47_07965	0.54	-0.6
1,685,707	+		IAI47_07965	0.55	+0.2
1,685,750	+		IAI47_07965	0.62	-0.2
1,685,936	+				-0.1
1,685,937	-				+0.6
1,685,937	-				+0.3
1,685,939	-				-0.6
1,685,962	+				-1.2
1,685,978	+				+1.0
1,685,982	-				+0.5
1,685,984	+				+1.3
1,685,984	+				-0.8
1,685,994	-				-0.7
1,685,996	+				+1.0
1,686,040	+				+1.8
1,686,041	-				-0.9
1,686,068	+				+0.4
1,686,069	-				-1.9
1,686,069	-				+0.6
1,686,069	-				-1.3
1,686,073	-				-0.1
1,686,079	+				-2.1
1,686,080	-				+0.1
1,686,117	+				-1.3
1,686,222	-				-0.3
1,686,222	-				+0.7
1,686,243	+				-0.7
1,686,244	-				-0.9
1,686,244	-				+0.1
1,686,244	-				+0.5
1,686,277	-				-1.8
1,686,391	-				-0.5
1,686,395	-				+0.3
1,686,395	-				-0.4
1,686,479	-				-0.4
1,686,512	-				-0.2
1,686,512	-				+0.1
1,686,580	+				+0.9
1,686,580	+				-1.8
1,686,580	+				+2.2
1,686,580	+				-1.6
1,686,580	+				-0.7
1,686,580	+				+1.5
1,686,580	+				-0.5
1,686,580	+				-3.3
1,686,580	+				-0.6
1,686,581	-				+1.0
1,686,581	-				-0.7
1,686,581	-				-0.5
1,686,581	-				-1.7
1,686,581	-				-0.5
1,686,581	-				-0.6
1,686,581	-				+1.8
1,686,581	-				-0.6
1,686,581	-				-0.6
1,686,581	-				+0.4
1,686,600	+				-2.2
1,686,600	+				-0.5
1,686,600	+				+0.0
1,686,601	-				-1.1
1,686,604	+				-2.3
1,686,605	-				+0.3
1,686,612	+				+0.9
1,686,613	-				+0.1
1,686,630	+				-1.1
1,686,654	+				-1.1
1,686,723	+		IAI47_07970	0.13	-3.7
1,686,738	+		IAI47_07970	0.15	-1.0
1,686,738	+		IAI47_07970	0.15	-3.3
1,686,739	-		IAI47_07970	0.15	+1.2
1,686,739	-		IAI47_07970	0.15	-2.4
1,686,739	-		IAI47_07970	0.15	-0.3
1,686,743	+		IAI47_07970	0.16	-1.3
1,686,743	+		IAI47_07970	0.16	-3.0
1,686,743	+		IAI47_07970	0.16	-0.9
1,686,743	+		IAI47_07970	0.16	-2.3
1,686,743	+		IAI47_07970	0.16	-0.9
1,686,743	+		IAI47_07970	0.16	-3.0
1,686,744	-		IAI47_07970	0.16	-0.2
1,686,744	-		IAI47_07970	0.16	+1.1
1,686,744	-		IAI47_07970	0.16	+0.2
1,686,744	-		IAI47_07970	0.16	-1.7
1,686,744	-		IAI47_07970	0.16	-0.5
1,686,744	-		IAI47_07970	0.16	-0.4
1,686,746	+		IAI47_07970	0.16	-0.7
1,686,746	+		IAI47_07970	0.16	-1.3
1,686,747	-		IAI47_07970	0.16	+0.2
1,686,747	-		IAI47_07970	0.16	+0.1
1,686,771	+		IAI47_07970	0.19	-1.5
1,686,771	+		IAI47_07970	0.19	-0.7
1,686,771	+		IAI47_07970	0.19	-3.1
1,686,772	-		IAI47_07970	0.20	-0.9
1,686,772	-		IAI47_07970	0.20	-1.1
1,686,772	-		IAI47_07970	0.20	+0.0
1,686,772	-		IAI47_07970	0.20	+0.1
1,686,792	+		IAI47_07970	0.22	-1.0
1,686,805	-		IAI47_07970	0.24	+0.4
1,686,813	+		IAI47_07970	0.25	-1.8
1,686,814	-		IAI47_07970	0.25	-1.5
1,686,814	-		IAI47_07970	0.25	+0.1
1,686,823	-		IAI47_07970	0.26	-0.3
1,686,846	+		IAI47_07970	0.29	-2.0
1,686,870	+		IAI47_07970	0.32	-2.2
1,686,912	+		IAI47_07970	0.37	-1.9
1,686,913	-		IAI47_07970	0.38	-0.8
1,686,913	-		IAI47_07970	0.38	+0.3
1,686,951	+		IAI47_07970	0.42	-1.7
1,686,952	-		IAI47_07970	0.42	-1.2
1,687,160	+		IAI47_07970	0.69	-1.9
1,687,161	-		IAI47_07970	0.69	+0.5
1,687,161	-		IAI47_07970	0.69	-1.0
1,687,161	-		IAI47_07970	0.69	-0.2
1,687,220	+		IAI47_07970	0.77	-0.7
1,687,220	+		IAI47_07970	0.77	-0.7
1,687,292	+		IAI47_07970	0.86	-0.5
1,687,292	+		IAI47_07970	0.86	-0.0
1,687,326	+				-1.4
1,687,326	+				+0.3
1,687,327	-				-0.3
1,687,397	+				-4.5
1,687,397	+				-0.9
1,687,397	+				-1.8
1,687,397	+				-2.0
1,687,397	+				-2.0
1,687,397	+				-0.6
1,687,397	+				-0.9
1,687,397	+				-0.6
1,687,398	-				-0.3
1,687,398	-				+0.7
1,687,398	-				-0.1
1,687,398	-				-1.4
1,687,416	+				-3.0
1,687,416	+				-1.6
1,687,416	+				-0.7
1,687,416	+				-2.3
1,687,416	+				-2.4
1,687,416	+				-0.9
1,687,416	+				-3.3
1,687,416	+				-0.7
1,687,416	+				-0.5
1,687,416	+				-0.4
1,687,416	+				-2.0
1,687,416	+				-1.9
1,687,417	-				+3.0
1,687,417	-				-0.6
1,687,417	-				-0.2
1,687,417	-				-0.2
1,687,417	-				-0.4
1,687,417	-				+0.2
1,687,417	-				-0.6
1,687,426	+				-0.4
1,687,427	-				-0.4
1,687,429	+				-0.5
1,687,430	-		IAI47_07975	0.10	+0.9
1,687,430	-		IAI47_07975	0.10	-1.0
1,687,430	-		IAI47_07975	0.10	-1.8
1,687,430	-		IAI47_07975	0.10	-0.3
1,687,444	+		IAI47_07975	0.15	-3.0
1,687,444	+		IAI47_07975	0.15	-2.4
1,687,445	-		IAI47_07975	0.16	-2.1
1,687,445	-		IAI47_07975	0.16	-0.6
1,687,446	+		IAI47_07975	0.16	-1.9
1,687,447	-		IAI47_07975	0.16	-1.2
1,687,447	-		IAI47_07975	0.16	+0.2
1,687,447	-		IAI47_07975	0.16	-0.8
1,687,447	-		IAI47_07975	0.16	-2.4
1,687,487	-		IAI47_07975	0.31	+0.7
1,687,514	-		IAI47_07975	0.41	-0.8
1,687,519	+		IAI47_07975	0.43	-1.3
1,687,519	+		IAI47_07975	0.43	-0.5
1,687,520	-		IAI47_07975	0.43	-1.7
1,687,520	-		IAI47_07975	0.43	-0.2
1,687,527	-		IAI47_07975	0.46	-0.9
1,687,527	-		IAI47_07975	0.46	+1.1
1,687,649	+				-2.3
1,687,649	+				-1.7
1,687,649	+				-1.2
1,687,650	-				-0.2
1,687,650	-				-1.8
1,687,650	-				-1.8
1,687,655	+				-0.9
1,687,672	+				-0.9
1,687,672	+				+0.3
1,687,672	+				-2.7
1,687,672	+				-1.7
1,687,672	+				-1.8
1,687,672	+				-2.3
1,687,672	+				-1.0
1,687,672	+				-0.1
1,687,672	+				-2.1
1,687,672	+				-2.8
1,687,672	+				-1.1
1,687,672	+				-1.5
1,687,672	+				+1.4
1,687,673	-				-0.5
1,687,673	-				-0.2
1,687,673	-				-0.4
1,687,673	-				-1.1
1,687,673	-				-0.7
1,687,673	-				-0.4
1,687,673	-				-0.0
1,687,673	-				+2.4
1,687,673	-				-0.7
1,687,673	-				-0.9
1,687,673	-				+0.1
1,687,673	-				+0.5
1,687,673	-				-1.4
1,687,673	-				-0.1
1,687,673	-				-0.9
1,687,673	-				-0.7
1,687,673	-				-1.7
1,687,706	+				-1.3
1,687,706	+				-0.8
1,687,706	+				-0.2
1,687,707	-				+0.4
1,687,707	-				+0.2
1,687,707	-				+0.9
1,687,707	-				-0.4
1,687,707	-				-1.5
1,687,866	+		IAI47_07980	0.23	-1.8
1,687,876	-		IAI47_07980	0.24	-1.2
1,687,876	-		IAI47_07980	0.24	-0.6
1,687,916	+		IAI47_07980	0.30	-1.1
1,687,916	+		IAI47_07980	0.30	-1.9
1,687,916	+		IAI47_07980	0.30	+0.2
1,687,916	+		IAI47_07980	0.30	-1.9
1,687,917	-		IAI47_07980	0.30	+0.5
1,687,917	-		IAI47_07980	0.30	-1.3
1,687,917	-		IAI47_07980	0.30	-1.7
1,687,996	+		IAI47_07980	0.41	-0.7
1,688,025	+		IAI47_07980	0.45	-1.4
1,688,026	-		IAI47_07980	0.45	-1.3
1,688,026	-		IAI47_07980	0.45	-0.7
1,688,026	-		IAI47_07980	0.45	-0.2
1,688,052	+		IAI47_07980	0.48	-0.2
1,688,052	+		IAI47_07980	0.48	-0.6
1,688,053	-		IAI47_07980	0.48	-1.8
1,688,099	+		IAI47_07980	0.55	-1.0
1,688,099	+		IAI47_07980	0.55	-2.5
1,688,100	-		IAI47_07980	0.55	-0.4
1,688,100	-		IAI47_07980	0.55	-0.5
1,688,100	-		IAI47_07980	0.55	-0.1
1,688,137	-		IAI47_07980	0.60	-2.0
1,688,139	+		IAI47_07980	0.60	-1.3
1,688,139	+		IAI47_07980	0.60	-1.0
1,688,139	+		IAI47_07980	0.60	-1.3
1,688,139	+		IAI47_07980	0.60	-1.8
1,688,139	+		IAI47_07980	0.60	-0.6
1,688,140	-		IAI47_07980	0.60	-0.1
1,688,140	-		IAI47_07980	0.60	-1.0
1,688,173	+		IAI47_07980	0.65	-0.8
1,688,173	+		IAI47_07980	0.65	-1.1
1,688,173	+		IAI47_07980	0.65	+1.0
1,688,174	-		IAI47_07980	0.65	-2.0
1,688,174	-		IAI47_07980	0.65	-0.5
1,688,174	-		IAI47_07980	0.65	-1.4
1,688,278	-		IAI47_07980	0.79	-0.1
1,688,395	+				-3.0
1,688,396	-				-1.3
1,688,396	-				-0.1