Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_03915 and IAI47_03920 are separated by 12 nucleotides IAI47_03920 and IAI47_03925 are separated by 142 nucleotides
IAI47_03915: IAI47_03915 - RNA pyrophosphohydrolase, at 815,711 to 816,238
_03915
IAI47_03920: IAI47_03920 - phosphoenolpyruvate--protein phosphotransferase, at 816,251 to 818,497
_03920
IAI47_03925: IAI47_03925 - prolipoprotein diacylglyceryl transferase, at 818,640 to 819,521
_03925
Position (kb) 816
817
818
819 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 815.271 kb on + strand at 815.271 kb on + strand at 815.271 kb on + strand at 815.271 kb on + strand at 815.272 kb on - strand at 815.272 kb on - strand at 815.272 kb on - strand at 815.272 kb on - strand at 815.272 kb on - strand at 815.272 kb on - strand at 815.300 kb on + strand at 815.320 kb on - strand at 815.334 kb on - strand at 815.366 kb on + strand at 815.392 kb on + strand at 815.443 kb on + strand at 815.447 kb on + strand at 815.453 kb on - strand at 815.554 kb on + strand at 815.584 kb on - strand at 815.660 kb on + strand at 815.660 kb on + strand at 815.660 kb on + strand at 815.660 kb on + strand at 816.181 kb on + strand, within IAI47_03915 at 816.181 kb on + strand, within IAI47_03915 at 816.181 kb on + strand, within IAI47_03915 at 816.181 kb on + strand, within IAI47_03915 at 816.181 kb on + strand, within IAI47_03915 at 816.181 kb on + strand, within IAI47_03915 at 816.181 kb on + strand, within IAI47_03915 at 816.181 kb on + strand, within IAI47_03915 at 816.181 kb on + strand, within IAI47_03915 at 816.182 kb on + strand, within IAI47_03915 at 816.182 kb on - strand, within IAI47_03915 at 816.182 kb on - strand, within IAI47_03915 at 816.182 kb on - strand, within IAI47_03915 at 816.182 kb on - strand, within IAI47_03915 at 816.182 kb on - strand, within IAI47_03915 at 816.209 kb on - strand at 816.226 kb on + strand at 816.227 kb on - strand at 816.227 kb on - strand at 816.227 kb on - strand at 816.250 kb on + strand at 816.250 kb on + strand at 816.250 kb on + strand at 816.250 kb on + strand at 816.250 kb on + strand at 816.250 kb on + strand at 816.250 kb on + strand at 816.250 kb on + strand at 816.251 kb on - strand at 816.251 kb on - strand at 816.251 kb on - strand at 816.251 kb on - strand at 816.371 kb on + strand at 816.371 kb on + strand at 816.372 kb on - strand at 816.398 kb on + strand at 816.398 kb on + strand at 816.399 kb on - strand at 816.399 kb on - strand at 816.401 kb on + strand at 816.401 kb on + strand at 816.401 kb on + strand at 816.402 kb on - strand at 816.402 kb on - strand at 816.447 kb on + strand at 816.448 kb on - strand at 816.448 kb on - strand at 816.469 kb on + strand at 816.480 kb on + strand, within IAI47_03920 at 816.503 kb on - strand, within IAI47_03920 at 816.506 kb on - strand, within IAI47_03920 at 816.542 kb on + strand, within IAI47_03920 at 816.542 kb on + strand, within IAI47_03920 at 816.542 kb on + strand, within IAI47_03920 at 816.542 kb on + strand, within IAI47_03920 at 816.542 kb on + strand, within IAI47_03920 at 816.542 kb on + strand, within IAI47_03920 at 816.542 kb on + strand, within IAI47_03920 at 816.542 kb on + strand, within IAI47_03920 at 816.542 kb on + strand, within IAI47_03920 at 816.543 kb on - strand, within IAI47_03920 at 816.543 kb on - strand, within IAI47_03920 at 816.543 kb on - strand, within IAI47_03920 at 816.543 kb on - strand, within IAI47_03920 at 816.543 kb on - strand, within IAI47_03920 at 816.543 kb on - strand, within IAI47_03920 at 816.543 kb on - strand, within IAI47_03920 at 816.543 kb on - strand, within IAI47_03920 at 816.543 kb on - strand, within IAI47_03920 at 816.543 kb on - strand, within IAI47_03920 at 816.543 kb on - strand, within IAI47_03920 at 816.543 kb on - strand, within IAI47_03920 at 816.543 kb on - strand, within IAI47_03920 at 816.545 kb on - strand, within IAI47_03920 at 816.545 kb on - strand, within IAI47_03920 at 816.595 kb on + strand, within IAI47_03920 at 816.595 kb on + strand, within IAI47_03920 at 816.595 kb on + strand, within IAI47_03920 at 816.595 kb on + strand, within IAI47_03920 at 816.596 kb on - strand, within IAI47_03920 at 816.691 kb on + strand, within IAI47_03920 at 816.983 kb on + strand, within IAI47_03920 at 816.983 kb on + strand, within IAI47_03920 at 816.983 kb on + strand, within IAI47_03920 at 816.983 kb on + strand, within IAI47_03920 at 816.983 kb on + strand, within IAI47_03920 at 816.984 kb on - strand, within IAI47_03920 at 816.984 kb on - strand, within IAI47_03920 at 816.984 kb on - strand, within IAI47_03920 at 817.118 kb on + strand, within IAI47_03920 at 817.118 kb on + strand, within IAI47_03920 at 817.118 kb on + strand, within IAI47_03920 at 817.118 kb on + strand, within IAI47_03920 at 817.118 kb on + strand, within IAI47_03920 at 817.118 kb on + strand, within IAI47_03920 at 817.118 kb on + strand, within IAI47_03920 at 817.119 kb on - strand, within IAI47_03920 at 817.119 kb on - strand, within IAI47_03920 at 817.119 kb on - strand, within IAI47_03920 at 817.119 kb on - strand, within IAI47_03920 at 817.119 kb on - strand, within IAI47_03920 at 817.119 kb on - strand, within IAI47_03920 at 817.119 kb on - strand, within IAI47_03920 at 817.119 kb on - strand, within IAI47_03920 at 817.150 kb on - strand, within IAI47_03920 at 817.254 kb on + strand, within IAI47_03920 at 817.254 kb on + strand, within IAI47_03920 at 817.255 kb on - strand, within IAI47_03920 at 817.255 kb on - strand, within IAI47_03920 at 817.255 kb on - strand, within IAI47_03920 at 817.255 kb on - strand, within IAI47_03920 at 817.255 kb on - strand, within IAI47_03920 at 817.287 kb on + strand, within IAI47_03920 at 817.463 kb on + strand, within IAI47_03920 at 817.464 kb on - strand, within IAI47_03920 at 817.578 kb on + strand, within IAI47_03920 at 817.579 kb on - strand, within IAI47_03920 at 817.651 kb on + strand, within IAI47_03920 at 817.651 kb on + strand, within IAI47_03920 at 817.651 kb on + strand, within IAI47_03920 at 817.651 kb on + strand, within IAI47_03920 at 817.652 kb on - strand, within IAI47_03920 at 817.652 kb on - strand, within IAI47_03920 at 817.697 kb on + strand, within IAI47_03920 at 817.705 kb on + strand, within IAI47_03920 at 817.705 kb on + strand, within IAI47_03920 at 817.705 kb on + strand, within IAI47_03920 at 817.706 kb on - strand, within IAI47_03920 at 817.706 kb on - strand, within IAI47_03920 at 817.706 kb on - strand, within IAI47_03920 at 817.706 kb on - strand, within IAI47_03920 at 817.706 kb on - strand, within IAI47_03920 at 817.706 kb on - strand, within IAI47_03920 at 817.778 kb on + strand, within IAI47_03920 at 817.778 kb on + strand, within IAI47_03920 at 817.778 kb on + strand, within IAI47_03920 at 817.778 kb on + strand, within IAI47_03920 at 817.778 kb on + strand, within IAI47_03920 at 817.778 kb on + strand, within IAI47_03920 at 817.778 kb on + strand, within IAI47_03920 at 817.778 kb on + strand, within IAI47_03920 at 817.778 kb on + strand, within IAI47_03920 at 817.778 kb on + strand, within IAI47_03920 at 817.778 kb on + strand, within IAI47_03920 at 817.778 kb on + strand, within IAI47_03920 at 817.778 kb on + strand, within IAI47_03920 at 817.778 kb on + strand, within IAI47_03920 at 817.779 kb on - strand, within IAI47_03920 at 817.779 kb on - strand, within IAI47_03920 at 817.779 kb on - strand, within IAI47_03920 at 817.779 kb on - strand, within IAI47_03920 at 817.779 kb on - strand, within IAI47_03920 at 817.779 kb on - strand, within IAI47_03920 at 817.779 kb on - strand, within IAI47_03920 at 817.866 kb on + strand, within IAI47_03920 at 817.867 kb on - strand, within IAI47_03920 at 817.867 kb on - strand, within IAI47_03920 at 817.933 kb on + strand, within IAI47_03920 at 817.934 kb on - strand, within IAI47_03920 at 818.059 kb on + strand, within IAI47_03920 at 818.059 kb on + strand, within IAI47_03920 at 818.059 kb on + strand, within IAI47_03920 at 818.059 kb on + strand, within IAI47_03920 at 818.059 kb on + strand, within IAI47_03920 at 818.059 kb on + strand, within IAI47_03920 at 818.059 kb on + strand, within IAI47_03920 at 818.059 kb on + strand, within IAI47_03920 at 818.060 kb on - strand, within IAI47_03920 at 818.060 kb on - strand, within IAI47_03920 at 818.060 kb on - strand, within IAI47_03920 at 818.123 kb on + strand, within IAI47_03920 at 818.123 kb on + strand, within IAI47_03920 at 818.123 kb on + strand, within IAI47_03920 at 818.123 kb on + strand, within IAI47_03920 at 818.123 kb on + strand, within IAI47_03920 at 818.123 kb on + strand, within IAI47_03920 at 818.123 kb on + strand, within IAI47_03920 at 818.124 kb on - strand, within IAI47_03920 at 818.124 kb on - strand, within IAI47_03920 at 818.124 kb on - strand, within IAI47_03920 at 818.146 kb on + strand, within IAI47_03920 at 818.146 kb on + strand, within IAI47_03920 at 818.147 kb on - strand, within IAI47_03920 at 818.147 kb on - strand, within IAI47_03920 at 818.147 kb on - strand, within IAI47_03920 at 818.168 kb on + strand, within IAI47_03920 at 818.168 kb on + strand, within IAI47_03920 at 818.168 kb on + strand, within IAI47_03920 at 818.169 kb on - strand, within IAI47_03920 at 818.169 kb on - strand, within IAI47_03920 at 818.329 kb on + strand at 818.330 kb on - strand at 818.338 kb on - strand at 818.338 kb on - strand at 818.347 kb on + strand at 818.347 kb on + strand at 818.347 kb on + strand at 818.347 kb on + strand at 818.348 kb on - strand at 818.348 kb on - strand at 818.348 kb on - strand at 818.352 kb on - strand at 818.352 kb on - strand at 818.352 kb on - strand at 818.453 kb on - strand at 818.496 kb on - strand at 818.496 kb on - strand at 818.496 kb on - strand at 818.496 kb on - strand at 818.496 kb on - strand at 818.498 kb on + strand at 818.498 kb on + strand at 818.498 kb on + strand at 818.499 kb on - strand at 818.499 kb on - strand at 818.499 kb on - strand at 818.570 kb on + strand at 818.570 kb on + strand at 818.570 kb on + strand at 818.590 kb on + strand at 818.590 kb on + strand at 818.590 kb on + strand at 818.590 kb on + strand at 818.590 kb on + strand at 818.590 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 remove 815,271 + +0.3 815,271 + +0.4 815,271 + +0.8 815,271 + +1.6 815,272 - +2.5 815,272 - -0.1 815,272 - -0.9 815,272 - +0.6 815,272 - +0.1 815,272 - +1.6 815,300 + +0.4 815,320 - +0.1 815,334 - +0.2 815,366 + -0.4 815,392 + +0.7 815,443 + -3.2 815,447 + -0.3 815,453 - -0.5 815,554 + +1.3 815,584 - +0.5 815,660 + +1.5 815,660 + +1.1 815,660 + -1.5 815,660 + +2.2 816,181 + IAI47_03915 0.89 +0.8 816,181 + IAI47_03915 0.89 +0.4 816,181 + IAI47_03915 0.89 +1.0 816,181 + IAI47_03915 0.89 -0.0 816,181 + IAI47_03915 0.89 -1.2 816,181 + IAI47_03915 0.89 +0.5 816,181 + IAI47_03915 0.89 -2.3 816,181 + IAI47_03915 0.89 -0.1 816,181 + IAI47_03915 0.89 +1.0 816,182 + IAI47_03915 0.89 +0.8 816,182 - IAI47_03915 0.89 +0.5 816,182 - IAI47_03915 0.89 -1.0 816,182 - IAI47_03915 0.89 +0.9 816,182 - IAI47_03915 0.89 -1.6 816,182 - IAI47_03915 0.89 -0.1 816,209 - -0.4 816,226 + -0.2 816,227 - -0.6 816,227 - -0.2 816,227 - +0.4 816,250 + +1.0 816,250 + -0.9 816,250 + +0.5 816,250 + -1.7 816,250 + -0.0 816,250 + +0.2 816,250 + +1.2 816,250 + -0.4 816,251 - +1.1 816,251 - +1.2 816,251 - +0.1 816,251 - -0.1 816,371 + -0.2 816,371 + -0.5 816,372 - -1.2 816,398 + +0.6 816,398 + -0.7 816,399 - +2.1 816,399 - +1.5 816,401 + -0.5 816,401 + +0.9 816,401 + +1.1 816,402 - -1.1 816,402 - -0.8 816,447 + -0.0 816,448 - -0.0 816,448 - +0.3 816,469 + -1.2 816,480 + IAI47_03920 0.10 -0.2 816,503 - IAI47_03920 0.11 -0.5 816,506 - IAI47_03920 0.11 -0.6 816,542 + IAI47_03920 0.13 -1.4 816,542 + IAI47_03920 0.13 -2.2 816,542 + IAI47_03920 0.13 -0.3 816,542 + IAI47_03920 0.13 -1.6 816,542 + IAI47_03920 0.13 -2.0 816,542 + IAI47_03920 0.13 -1.8 816,542 + IAI47_03920 0.13 -1.1 816,542 + IAI47_03920 0.13 -1.1 816,542 + IAI47_03920 0.13 -0.7 816,543 - IAI47_03920 0.13 +2.2 816,543 - IAI47_03920 0.13 +0.2 816,543 - IAI47_03920 0.13 -0.6 816,543 - IAI47_03920 0.13 -0.3 816,543 - IAI47_03920 0.13 +2.1 816,543 - IAI47_03920 0.13 -0.4 816,543 - IAI47_03920 0.13 -0.7 816,543 - IAI47_03920 0.13 -0.4 816,543 - IAI47_03920 0.13 -0.6 816,543 - IAI47_03920 0.13 -1.6 816,543 - IAI47_03920 0.13 -2.4 816,543 - IAI47_03920 0.13 -0.8 816,543 - IAI47_03920 0.13 +0.0 816,545 - IAI47_03920 0.13 -1.9 816,545 - IAI47_03920 0.13 -3.8 816,595 + IAI47_03920 0.15 -0.8 816,595 + IAI47_03920 0.15 -1.8 816,595 + IAI47_03920 0.15 -1.6 816,595 + IAI47_03920 0.15 -1.6 816,596 - IAI47_03920 0.15 +0.6 816,691 + IAI47_03920 0.20 -1.3 816,983 + IAI47_03920 0.33 +0.2 816,983 + IAI47_03920 0.33 +1.2 816,983 + IAI47_03920 0.33 -0.1 816,983 + IAI47_03920 0.33 +0.0 816,983 + IAI47_03920 0.33 -0.8 816,984 - IAI47_03920 0.33 +0.2 816,984 - IAI47_03920 0.33 +0.1 816,984 - IAI47_03920 0.33 +0.2 817,118 + IAI47_03920 0.39 -0.9 817,118 + IAI47_03920 0.39 -1.1 817,118 + IAI47_03920 0.39 -1.1 817,118 + IAI47_03920 0.39 +0.7 817,118 + IAI47_03920 0.39 -2.4 817,118 + IAI47_03920 0.39 -1.5 817,118 + IAI47_03920 0.39 -0.4 817,119 - IAI47_03920 0.39 -3.0 817,119 - IAI47_03920 0.39 -1.4 817,119 - IAI47_03920 0.39 -1.8 817,119 - IAI47_03920 0.39 -0.2 817,119 - IAI47_03920 0.39 -1.6 817,119 - IAI47_03920 0.39 -0.1 817,119 - IAI47_03920 0.39 -2.8 817,119 - IAI47_03920 0.39 +0.1 817,150 - IAI47_03920 0.40 +0.5 817,254 + IAI47_03920 0.45 -1.5 817,254 + IAI47_03920 0.45 +0.8 817,255 - IAI47_03920 0.45 -0.3 817,255 - IAI47_03920 0.45 -0.5 817,255 - IAI47_03920 0.45 +0.2 817,255 - IAI47_03920 0.45 +1.5 817,255 - IAI47_03920 0.45 -0.0 817,287 + IAI47_03920 0.46 +0.2 817,463 + IAI47_03920 0.54 -1.7 817,464 - IAI47_03920 0.54 +0.9 817,578 + IAI47_03920 0.59 +0.4 817,579 - IAI47_03920 0.59 -0.2 817,651 + IAI47_03920 0.62 -1.3 817,651 + IAI47_03920 0.62 -1.2 817,651 + IAI47_03920 0.62 -0.1 817,651 + IAI47_03920 0.62 -1.2 817,652 - IAI47_03920 0.62 -1.1 817,652 - IAI47_03920 0.62 -2.4 817,697 + IAI47_03920 0.64 +1.5 817,705 + IAI47_03920 0.65 +0.6 817,705 + IAI47_03920 0.65 -2.8 817,705 + IAI47_03920 0.65 -0.6 817,706 - IAI47_03920 0.65 -2.1 817,706 - IAI47_03920 0.65 -0.3 817,706 - IAI47_03920 0.65 +0.2 817,706 - IAI47_03920 0.65 +0.2 817,706 - IAI47_03920 0.65 -1.7 817,706 - IAI47_03920 0.65 +0.5 817,778 + IAI47_03920 0.68 +1.4 817,778 + IAI47_03920 0.68 -1.4 817,778 + IAI47_03920 0.68 -1.1 817,778 + IAI47_03920 0.68 -0.6 817,778 + IAI47_03920 0.68 -1.4 817,778 + IAI47_03920 0.68 -0.4 817,778 + IAI47_03920 0.68 +1.2 817,778 + IAI47_03920 0.68 +0.5 817,778 + IAI47_03920 0.68 -2.0 817,778 + IAI47_03920 0.68 +0.7 817,778 + IAI47_03920 0.68 -0.1 817,778 + IAI47_03920 0.68 -0.4 817,778 + IAI47_03920 0.68 -1.8 817,778 + IAI47_03920 0.68 -0.1 817,779 - IAI47_03920 0.68 -0.5 817,779 - IAI47_03920 0.68 -1.2 817,779 - IAI47_03920 0.68 -0.8 817,779 - IAI47_03920 0.68 -0.5 817,779 - IAI47_03920 0.68 -0.5 817,779 - IAI47_03920 0.68 -1.4 817,779 - IAI47_03920 0.68 +1.5 817,866 + IAI47_03920 0.72 -0.3 817,867 - IAI47_03920 0.72 -0.4 817,867 - IAI47_03920 0.72 -0.9 817,933 + IAI47_03920 0.75 +1.3 817,934 - IAI47_03920 0.75 +0.9 818,059 + IAI47_03920 0.80 -1.4 818,059 + IAI47_03920 0.80 -1.0 818,059 + IAI47_03920 0.80 +0.3 818,059 + IAI47_03920 0.80 -0.6 818,059 + IAI47_03920 0.80 -2.4 818,059 + IAI47_03920 0.80 -0.1 818,059 + IAI47_03920 0.80 -0.8 818,059 + IAI47_03920 0.80 -0.5 818,060 - IAI47_03920 0.81 -0.6 818,060 - IAI47_03920 0.81 +0.2 818,060 - IAI47_03920 0.81 -0.2 818,123 + IAI47_03920 0.83 +2.9 818,123 + IAI47_03920 0.83 -0.4 818,123 + IAI47_03920 0.83 +1.4 818,123 + IAI47_03920 0.83 -3.1 818,123 + IAI47_03920 0.83 +0.2 818,123 + IAI47_03920 0.83 -0.4 818,123 + IAI47_03920 0.83 -2.2 818,124 - IAI47_03920 0.83 -0.4 818,124 - IAI47_03920 0.83 -0.3 818,124 - IAI47_03920 0.83 -1.1 818,146 + IAI47_03920 0.84 -2.0 818,146 + IAI47_03920 0.84 -0.4 818,147 - IAI47_03920 0.84 -2.4 818,147 - IAI47_03920 0.84 -2.0 818,147 - IAI47_03920 0.84 -1.6 818,168 + IAI47_03920 0.85 -1.6 818,168 + IAI47_03920 0.85 -0.4 818,168 + IAI47_03920 0.85 -0.1 818,169 - IAI47_03920 0.85 -2.6 818,169 - IAI47_03920 0.85 -0.4 818,329 + +0.4 818,330 - +0.5 818,338 - -1.4 818,338 - -1.7 818,347 + -2.2 818,347 + -2.0 818,347 + -0.8 818,347 + +0.2 818,348 - -1.9 818,348 - +1.2 818,348 - -0.7 818,352 - -0.8 818,352 - -0.4 818,352 - +0.4 818,453 - -0.3 818,496 - +0.5 818,496 - -2.2 818,496 - +1.2 818,496 - +0.2 818,496 - -3.5 818,498 + -0.6 818,498 + +1.1 818,498 + -0.5 818,499 - -0.4 818,499 - +0.2 818,499 - -0.3 818,570 + +1.5 818,570 + +0.9 818,570 + -0.1 818,590 + -0.1 818,590 + -0.3 818,590 + -1.4 818,590 + -1.2 818,590 + -1.2 818,590 + -0.2
Or see this region's nucleotide sequence