Strain Fitness in Pantoea sp. MT58 around IAI47_17410

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,686,612	+		IAI47_17400	0.53	+0.9
3,686,651	-		IAI47_17400	0.57	+1.2
3,686,661	+		IAI47_17400	0.58	-0.8
3,686,661	+		IAI47_17400	0.58	+0.0
3,686,661	+		IAI47_17400	0.58	+1.4
3,686,661	+		IAI47_17400	0.58	-0.5
3,686,661	+		IAI47_17400	0.58	-1.6
3,686,661	+		IAI47_17400	0.58	+0.1
3,686,661	+		IAI47_17400	0.58	-0.2
3,686,661	+		IAI47_17400	0.58	-0.2
3,686,661	+		IAI47_17400	0.58	-0.7
3,686,661	+		IAI47_17400	0.58	-0.3
3,686,661	+		IAI47_17400	0.58	-0.1
3,686,661	+		IAI47_17400	0.58	-0.8
3,686,662	-		IAI47_17400	0.58	-0.4
3,686,662	-		IAI47_17400	0.58	+0.0
3,686,662	-		IAI47_17400	0.58	+0.2
3,686,662	-		IAI47_17400	0.58	+0.3
3,686,662	-		IAI47_17400	0.58	+0.5
3,686,662	-		IAI47_17400	0.58	-0.1
3,686,662	-		IAI47_17400	0.58	-0.6
3,686,662	-		IAI47_17400	0.58	+0.1
3,686,662	-		IAI47_17400	0.58	+1.1
3,686,662	-		IAI47_17400	0.58	-0.5
3,686,662	-		IAI47_17400	0.58	+0.1
3,686,748	-		IAI47_17400	0.66	-1.2
3,686,768	+		IAI47_17400	0.68	+1.3
3,686,769	-		IAI47_17400	0.68	-0.0
3,686,769	-		IAI47_17400	0.68	-1.2
3,686,827	-		IAI47_17400	0.73	-1.5
3,686,849	+		IAI47_17400	0.75	-0.0
3,686,849	+		IAI47_17400	0.75	-0.1
3,686,849	+		IAI47_17400	0.75	+3.1
3,686,849	+		IAI47_17400	0.75	-0.2
3,686,849	+		IAI47_17400	0.75	+0.7
3,686,850	-		IAI47_17400	0.75	+3.3
3,686,850	-		IAI47_17400	0.75	+1.2
3,686,850	-		IAI47_17400	0.75	+1.3
3,686,950	+		IAI47_17400	0.85	+1.3
3,686,950	+		IAI47_17400	0.85	+1.5
3,686,950	+		IAI47_17400	0.85	+0.0
3,686,951	-		IAI47_17400	0.85	+0.0
3,686,951	-		IAI47_17400	0.85	+0.8
3,686,951	-		IAI47_17400	0.85	+0.2
3,686,953	+		IAI47_17400	0.85	-0.3
3,686,953	+		IAI47_17400	0.85	+0.6
3,686,980	+		IAI47_17400	0.88	-1.4
3,686,981	-		IAI47_17400	0.88	-0.9
3,686,983	+		IAI47_17400	0.88	-0.3
3,686,983	+		IAI47_17400	0.88	-1.8
3,686,983	+		IAI47_17400	0.88	+1.7
3,686,984	-		IAI47_17400	0.88	+1.3
3,686,984	-		IAI47_17400	0.88	+0.6
3,686,984	-		IAI47_17400	0.88	-0.2
3,686,984	-		IAI47_17400	0.88	-1.8
3,686,984	-		IAI47_17400	0.88	+0.0
3,686,994	+		IAI47_17400	0.89	-0.3
3,686,994	+		IAI47_17400	0.89	+0.7
3,686,994	+		IAI47_17400	0.89	+0.2
3,686,994	+		IAI47_17400	0.89	+1.2
3,686,994	+		IAI47_17400	0.89	-1.7
3,686,994	+		IAI47_17400	0.89	+0.4
3,686,995	-		IAI47_17400	0.89	-0.1
3,686,995	-		IAI47_17400	0.89	-1.0
3,686,995	-		IAI47_17400	0.89	-1.0
3,686,995	-		IAI47_17400	0.89	-0.7
3,686,995	-		IAI47_17400	0.89	-0.1
3,686,995	-		IAI47_17400	0.89	+0.7
3,686,995	-		IAI47_17400	0.89	-2.8
3,686,997	+		IAI47_17400	0.89	+2.5
3,686,998	-		IAI47_17400	0.89	-1.3
3,687,042	+				-1.1
3,687,043	-				-0.7
3,687,105	+				+0.9
3,687,105	+				-0.3
3,687,105	+				+0.0
3,687,106	-				+0.1
3,687,106	-				+0.8
3,687,106	-				+1.0
3,687,163	+				-2.6
3,687,173	-				-0.1
3,687,229	+		IAI47_17405	0.16	-0.0
3,687,229	+		IAI47_17405	0.16	-1.4
3,687,230	-		IAI47_17405	0.16	-2.2
3,687,230	-		IAI47_17405	0.16	+2.7
3,687,230	-		IAI47_17405	0.16	+0.1
3,687,325	+		IAI47_17405	0.53	+0.7
3,687,325	+		IAI47_17405	0.53	-0.0
3,687,325	+		IAI47_17405	0.53	-2.2
3,687,326	-		IAI47_17405	0.53	-0.4
3,687,326	-		IAI47_17405	0.53	-1.4
3,687,378	+		IAI47_17405	0.74	+1.3
3,687,378	+		IAI47_17405	0.74	+0.6
3,687,378	+		IAI47_17405	0.74	-0.7
3,687,378	+		IAI47_17405	0.74	-1.0
3,687,378	+		IAI47_17405	0.74	-1.0
3,687,378	+		IAI47_17405	0.74	-1.2
3,687,378	+		IAI47_17405	0.74	+1.3
3,687,379	-		IAI47_17405	0.74	-0.8
3,687,379	-		IAI47_17405	0.74	+0.4
3,687,379	-		IAI47_17405	0.74	-2.4
3,687,379	-		IAI47_17405	0.74	-0.4
3,687,379	-		IAI47_17405	0.74	-0.7
3,687,379	-		IAI47_17405	0.74	+0.7
3,687,406	-		IAI47_17405	0.84	-1.1
3,687,406	-		IAI47_17405	0.84	+0.5
3,687,431	+				-2.0
3,687,450	-				+0.4
3,687,450	-				-0.9
3,687,516	+				+1.4
3,687,669	+				-0.4
3,687,669	+				-0.7
3,687,670	-				-0.5
3,687,734	+		IAI47_17410	0.11	-1.4
3,687,806	-		IAI47_17410	0.14	-1.5
3,687,825	+		IAI47_17410	0.15	-0.9
3,687,825	+		IAI47_17410	0.15	-1.1
3,687,825	+		IAI47_17410	0.15	-0.9
3,687,825	+		IAI47_17410	0.15	-1.0
3,687,846	+		IAI47_17410	0.16	+1.0
3,687,846	+		IAI47_17410	0.16	-0.3
3,687,846	+		IAI47_17410	0.16	+0.8
3,687,846	+		IAI47_17410	0.16	+1.7
3,687,846	+		IAI47_17410	0.16	-1.0
3,687,847	-		IAI47_17410	0.16	-1.5
3,687,847	-		IAI47_17410	0.16	+1.9
3,687,847	-		IAI47_17410	0.16	-1.0
3,687,847	-		IAI47_17410	0.16	+0.5
3,687,872	+		IAI47_17410	0.17	-0.3
3,687,872	+		IAI47_17410	0.17	-0.8
3,687,873	-		IAI47_17410	0.17	+2.0
3,687,873	-		IAI47_17410	0.17	-0.9
3,687,886	+		IAI47_17410	0.17	-0.4
3,687,886	+		IAI47_17410	0.17	+1.2
3,687,887	-		IAI47_17410	0.17	+1.3
3,687,887	-		IAI47_17410	0.17	+0.7
3,687,887	-		IAI47_17410	0.17	+0.5
3,687,887	-		IAI47_17410	0.17	+1.2
3,688,035	+		IAI47_17410	0.23	-1.8
3,688,036	-		IAI47_17410	0.23	-0.5
3,688,036	-		IAI47_17410	0.23	-1.3
3,688,036	-		IAI47_17410	0.23	+2.0
3,688,048	+		IAI47_17410	0.24	+0.4
3,688,062	+		IAI47_17410	0.24	+0.9
3,688,090	+		IAI47_17410	0.26	-0.6
3,688,090	+		IAI47_17410	0.26	+0.9
3,688,091	-		IAI47_17410	0.26	-0.7
3,688,091	-		IAI47_17410	0.26	+0.5
3,688,131	+		IAI47_17410	0.27	-1.1
3,688,132	-		IAI47_17410	0.27	-0.6
3,688,132	-		IAI47_17410	0.27	-0.0
3,688,132	-		IAI47_17410	0.27	-1.4
3,688,132	-		IAI47_17410	0.27	+0.1
3,688,264	+		IAI47_17410	0.33	+0.4
3,688,264	+		IAI47_17410	0.33	-1.0
3,688,265	-		IAI47_17410	0.33	-0.3
3,688,365	+		IAI47_17410	0.37	-1.0
3,688,365	+		IAI47_17410	0.37	-0.8
3,688,365	+		IAI47_17410	0.37	+2.0
3,688,365	+		IAI47_17410	0.37	+2.7
3,688,365	+		IAI47_17410	0.37	+0.6
3,688,365	+		IAI47_17410	0.37	+1.1
3,688,366	-		IAI47_17410	0.37	+0.2
3,688,366	-		IAI47_17410	0.37	-0.2
3,688,366	-		IAI47_17410	0.37	-0.3
3,688,366	-		IAI47_17410	0.37	+0.1
3,688,383	+		IAI47_17410	0.38	+0.7
3,688,383	+		IAI47_17410	0.38	+0.3
3,688,384	-		IAI47_17410	0.38	-1.9
3,688,384	-		IAI47_17410	0.38	+1.0
3,688,384	-		IAI47_17410	0.38	+0.0
3,688,398	+		IAI47_17410	0.38	+1.1
3,688,398	+		IAI47_17410	0.38	+0.0
3,688,398	+		IAI47_17410	0.38	-1.4
3,688,399	-		IAI47_17410	0.38	+0.8
3,688,408	+		IAI47_17410	0.39	+0.9
3,688,408	+		IAI47_17410	0.39	+0.8
3,688,408	+		IAI47_17410	0.39	-0.5
3,688,482	+		IAI47_17410	0.42	-2.1
3,688,482	+		IAI47_17410	0.42	+0.8
3,688,482	+		IAI47_17410	0.42	-1.7
3,688,482	+		IAI47_17410	0.42	-0.9
3,688,482	+		IAI47_17410	0.42	+0.1
3,688,482	+		IAI47_17410	0.42	+0.4
3,688,482	+		IAI47_17410	0.42	+1.1
3,688,483	-		IAI47_17410	0.42	-0.0
3,688,483	-		IAI47_17410	0.42	+0.3
3,688,483	-		IAI47_17410	0.42	-0.4
3,688,483	-		IAI47_17410	0.42	+1.0
3,688,483	-		IAI47_17410	0.42	-1.1
3,688,525	+		IAI47_17410	0.43	-1.9
3,688,525	+		IAI47_17410	0.43	-0.9
3,688,526	-		IAI47_17410	0.43	+0.8
3,688,526	-		IAI47_17410	0.43	+0.2
3,688,526	-		IAI47_17410	0.43	+0.1
3,688,526	-		IAI47_17410	0.43	-2.1
3,688,538	+		IAI47_17410	0.44	-0.4
3,688,539	-		IAI47_17410	0.44	-1.1
3,688,571	+		IAI47_17410	0.45	-0.6
3,688,599	-		IAI47_17410	0.46	-0.7
3,688,612	+		IAI47_17410	0.47	+1.1
3,688,612	+		IAI47_17410	0.47	-0.1
3,688,612	+		IAI47_17410	0.47	-0.4
3,688,612	+		IAI47_17410	0.47	+0.5
3,688,612	+		IAI47_17410	0.47	+0.8
3,688,612	+		IAI47_17410	0.47	+0.4
3,688,613	-		IAI47_17410	0.47	-0.3
3,688,613	-		IAI47_17410	0.47	-1.1
3,688,613	-		IAI47_17410	0.47	+0.4
3,688,657	+		IAI47_17410	0.49	-0.7
3,688,657	+		IAI47_17410	0.49	+1.2
3,688,657	+		IAI47_17410	0.49	+0.3
3,688,657	+		IAI47_17410	0.49	+0.1
3,688,657	+		IAI47_17410	0.49	+1.1
3,688,657	+		IAI47_17410	0.49	+1.0
3,688,658	-		IAI47_17410	0.49	+1.1
3,688,658	-		IAI47_17410	0.49	-0.5
3,688,658	-		IAI47_17410	0.49	-1.3
3,688,658	-		IAI47_17410	0.49	+0.4
3,688,661	+		IAI47_17410	0.49	+1.3
3,688,662	-		IAI47_17410	0.49	+0.6
3,688,662	-		IAI47_17410	0.49	-0.6
3,688,668	-		IAI47_17410	0.49	-0.4
3,688,668	-		IAI47_17410	0.49	-1.3
3,688,698	+		IAI47_17410	0.50	+0.4
3,688,698	+		IAI47_17410	0.50	-0.3
3,688,698	+		IAI47_17410	0.50	-0.3
3,688,698	+		IAI47_17410	0.50	+0.3
3,688,698	+		IAI47_17410	0.50	-1.1
3,688,698	+		IAI47_17410	0.50	+0.6
3,688,698	+		IAI47_17410	0.50	+1.6
3,688,698	+		IAI47_17410	0.50	+0.2
3,688,699	-		IAI47_17410	0.50	-0.4
3,688,699	-		IAI47_17410	0.50	+0.3
3,688,699	-		IAI47_17410	0.50	+0.5
3,688,699	-		IAI47_17410	0.50	-1.1
3,688,699	-		IAI47_17410	0.50	+1.5
3,688,699	-		IAI47_17410	0.50	-1.3
3,688,699	-		IAI47_17410	0.50	-2.6
3,688,709	+		IAI47_17410	0.51	-0.2
3,688,709	+		IAI47_17410	0.51	+0.7
3,688,709	+		IAI47_17410	0.51	+0.7
3,688,709	+		IAI47_17410	0.51	+0.6
3,688,709	+		IAI47_17410	0.51	-1.8
3,688,709	+		IAI47_17410	0.51	+0.5
3,688,709	+		IAI47_17410	0.51	+0.1
3,688,715	+		IAI47_17410	0.51	+1.7
3,688,716	-		IAI47_17410	0.51	-1.2
3,688,716	-		IAI47_17410	0.51	+0.9
3,688,731	+		IAI47_17410	0.52	-1.5
3,688,731	+		IAI47_17410	0.52	-0.2
3,688,732	-		IAI47_17410	0.52	-1.6
3,688,787	+		IAI47_17410	0.54	+0.1
3,688,787	+		IAI47_17410	0.54	+0.3
3,688,814	+		IAI47_17410	0.55	-1.4
3,688,814	+		IAI47_17410	0.55	-0.5
3,688,814	+		IAI47_17410	0.55	-0.6
3,688,814	+		IAI47_17410	0.55	-1.0
3,688,815	-		IAI47_17410	0.55	+0.4
3,688,815	-		IAI47_17410	0.55	-0.1
3,688,815	-		IAI47_17410	0.55	+1.6
3,688,836	+		IAI47_17410	0.56	+0.6
3,688,840	+		IAI47_17410	0.56	+0.7
3,688,840	+		IAI47_17410	0.56	+0.1
3,688,840	+		IAI47_17410	0.56	-0.8
3,688,840	+		IAI47_17410	0.56	+0.9
3,688,840	+		IAI47_17410	0.56	-0.2
3,688,840	+		IAI47_17410	0.56	+2.6
3,688,840	+		IAI47_17410	0.56	+1.9
3,688,841	-		IAI47_17410	0.56	+0.7
3,688,841	-		IAI47_17410	0.56	+0.3
3,688,841	-		IAI47_17410	0.56	-0.6
3,688,841	-		IAI47_17410	0.56	-1.0
3,688,841	-		IAI47_17410	0.56	+1.1
3,688,841	-		IAI47_17410	0.56	+1.5
3,688,841	-		IAI47_17410	0.56	-1.0
3,688,841	-		IAI47_17410	0.56	-0.9
3,688,841	-		IAI47_17410	0.56	+1.0
3,688,919	-		IAI47_17410	0.59	+1.2
3,688,919	-		IAI47_17410	0.59	+0.6
3,688,932	+		IAI47_17410	0.60	-0.5
3,688,978	+		IAI47_17410	0.62	+0.8
3,688,978	+		IAI47_17410	0.62	+0.5
3,689,003	-		IAI47_17410	0.63	+0.3
3,689,137	+		IAI47_17410	0.68	+1.8
3,689,146	+		IAI47_17410	0.69	+0.5
3,689,147	-		IAI47_17410	0.69	+0.2
3,689,193	+		IAI47_17410	0.71	+0.3
3,689,193	+		IAI47_17410	0.71	+2.1
3,689,193	+		IAI47_17410	0.71	+1.8
3,689,194	-		IAI47_17410	0.71	-0.0
3,689,238	-		IAI47_17410	0.72	+0.2
3,689,347	+		IAI47_17410	0.77	+0.5
3,689,347	+		IAI47_17410	0.77	+1.0
3,689,348	-		IAI47_17410	0.77	-1.0
3,689,348	-		IAI47_17410	0.77	+1.1
3,689,348	-		IAI47_17410	0.77	+1.3
3,689,389	+		IAI47_17410	0.79	+1.3
3,689,389	+		IAI47_17410	0.79	+1.3
3,689,389	+		IAI47_17410	0.79	+0.5
3,689,389	+		IAI47_17410	0.79	+1.1
3,689,389	+		IAI47_17410	0.79	-0.2
3,689,389	+		IAI47_17410	0.79	+0.9
3,689,389	+		IAI47_17410	0.79	-2.0
3,689,390	-		IAI47_17410	0.79	-0.6
3,689,390	-		IAI47_17410	0.79	-0.7
3,689,390	-		IAI47_17410	0.79	-0.2
3,689,390	-		IAI47_17410	0.79	+0.2
3,689,390	-		IAI47_17410	0.79	-0.7
3,689,390	-		IAI47_17410	0.79	+2.1
3,689,390	-		IAI47_17410	0.79	+1.0
3,689,390	-		IAI47_17410	0.79	+1.6
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