Strain Fitness in Pantoea sp. MT58 around IAI47_16900

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,582,364	+		IAI47_16895	0.73	-0.5
3,582,364	+		IAI47_16895	0.73	+1.6
3,582,364	+		IAI47_16895	0.73	+0.7
3,582,364	+		IAI47_16895	0.73	-0.1
3,582,364	+		IAI47_16895	0.73	-0.4
3,582,364	+		IAI47_16895	0.73	+0.9
3,582,364	+		IAI47_16895	0.73	-0.7
3,582,365	-		IAI47_16895	0.73	-0.7
3,582,393	+		IAI47_16895	0.74	+0.0
3,582,393	+		IAI47_16895	0.74	-0.1
3,582,393	+		IAI47_16895	0.74	+0.1
3,582,468	+		IAI47_16895	0.76	+0.6
3,582,500	+		IAI47_16895	0.77	+1.7
3,582,501	-		IAI47_16895	0.77	-0.3
3,582,572	+		IAI47_16895	0.79	+0.3
3,582,572	+		IAI47_16895	0.79	-0.3
3,582,572	+		IAI47_16895	0.79	+1.9
3,582,572	+		IAI47_16895	0.79	+0.3
3,582,572	+		IAI47_16895	0.79	-0.4
3,582,573	-		IAI47_16895	0.79	+0.5
3,582,573	-		IAI47_16895	0.79	+1.0
3,582,573	-		IAI47_16895	0.79	+0.7
3,582,603	+		IAI47_16895	0.80	+0.4
3,582,603	+		IAI47_16895	0.80	-1.8
3,582,604	-		IAI47_16895	0.80	-0.5
3,582,627	+		IAI47_16895	0.81	+1.3
3,582,627	+		IAI47_16895	0.81	+0.8
3,582,628	-		IAI47_16895	0.81	-2.5
3,582,628	-		IAI47_16895	0.81	-0.7
3,582,751	+		IAI47_16895	0.85	+1.3
3,582,751	+		IAI47_16895	0.85	+1.4
3,582,751	+		IAI47_16895	0.85	-0.0
3,582,752	-		IAI47_16895	0.85	+1.6
3,582,752	-		IAI47_16895	0.85	-1.5
3,582,752	-		IAI47_16895	0.85	+0.2
3,582,752	-		IAI47_16895	0.85	+0.7
3,582,765	+		IAI47_16895	0.85	-0.2
3,582,846	+		IAI47_16895	0.88	+0.2
3,582,855	+		IAI47_16895	0.88	-1.0
3,582,856	-		IAI47_16895	0.88	+2.1
3,582,857	+		IAI47_16895	0.88	-0.2
3,582,857	+		IAI47_16895	0.88	+0.5
3,582,858	-		IAI47_16895	0.88	-0.1
3,582,970	-				-0.2
3,583,031	-				-1.4
3,583,031	-				-0.2
3,583,119	-				-0.5
3,583,156	-				-0.2
3,583,158	-				+0.7
3,583,221	+				-0.7
3,583,536	-		IAI47_16900	0.25	+1.3
3,583,536	-		IAI47_16900	0.25	+0.2
3,583,623	+		IAI47_16900	0.32	-0.1
3,583,623	+		IAI47_16900	0.32	+0.4
3,583,624	-		IAI47_16900	0.32	+1.9
3,583,736	+		IAI47_16900	0.41	-1.0
3,583,867	+		IAI47_16900	0.52	+0.3
3,583,867	+		IAI47_16900	0.52	+1.7
3,583,868	-		IAI47_16900	0.52	-2.1
3,583,868	-		IAI47_16900	0.52	+0.6
3,583,868	-		IAI47_16900	0.52	+0.1
3,583,868	-		IAI47_16900	0.52	+0.6
3,583,927	+		IAI47_16900	0.57	-1.8
3,584,063	-		IAI47_16900	0.68	+3.2
3,584,083	+		IAI47_16900	0.70	+0.1
3,584,083	+		IAI47_16900	0.70	-1.1
3,584,083	+		IAI47_16900	0.70	-0.5
3,584,255	+		IAI47_16900	0.84	-0.8
3,584,255	+		IAI47_16900	0.84	+1.1
3,584,255	+		IAI47_16900	0.84	-0.2
3,584,364	-				-0.3
3,584,364	-				+0.3
3,584,421	-				-0.7
3,584,421	-				-0.3
3,584,464	+				-0.2
3,584,555	+				-1.8
3,584,555	+				+1.3
3,584,581	+				-0.6
3,584,581	+				+0.4
3,584,581	+				-0.1
3,584,582	-				-1.5
3,584,606	+				-1.9
3,584,633	+				+0.2
3,584,635	+				+1.4
3,584,635	+				+0.8
3,584,635	+				-0.9
3,584,635	+				+1.0
3,584,635	+				+0.0
3,584,636	-				-0.0
3,584,636	-				+0.4
3,584,636	-				-0.2
3,584,636	-				+1.6
3,584,700	+				+0.4
3,584,700	+				-0.9
3,584,700	+				+2.2
3,584,701	-				+0.8
3,584,701	-				-1.2
3,584,703	+				-0.7
3,584,703	+				-0.2
3,584,703	+				+1.1
3,584,703	+				+0.7
3,584,703	+				-0.1
3,584,704	-				-0.5
3,584,704	-				-0.5
3,584,704	-				+0.2
3,584,704	-				+1.2
3,584,704	-				-0.3
3,584,750	+				-1.5
3,584,750	+				-0.3
3,584,750	+				+0.3
3,584,750	+				-1.2
3,584,750	+				-2.0
3,584,750	+				+0.1
3,584,750	+				-0.3
3,584,750	+				+0.9
3,584,750	+				+1.1
3,584,750	+				+0.8
3,584,751	-				-0.0
3,584,751	-				-1.0
3,584,751	-				+1.4
3,584,751	-				-0.3
3,584,765	+				-3.2
3,584,766	-				+0.3
3,584,766	-				+0.9
3,584,766	-				+0.2
3,584,841	+				+0.7
3,584,842	-				+3.2
3,584,859	+				+1.7
3,584,875	+				-0.5
3,584,892	-				-0.2
3,584,911	+				+0.4
3,584,912	-				-0.0
3,584,912	-				+1.1
3,584,957	+				+0.6
3,584,958	-				+1.1
3,584,960	+				-1.3
3,584,960	+				-1.1
3,584,960	+				+1.3
3,584,960	+				-1.8
3,584,961	-				-0.3
3,584,961	-				+0.7
3,584,961	-				+0.3
3,584,961	-				-0.6
3,584,961	-				+1.9
3,584,961	-				-0.5
3,584,961	-				-2.6
3,584,961	-				+0.3
3,584,961	-				-1.1
3,584,961	-				+0.1
3,584,961	-				+0.4
3,584,963	+				+2.7
3,585,066	-		IAI47_16905	0.11	+1.3
3,585,076	+		IAI47_16905	0.12	-2.2
3,585,076	+		IAI47_16905	0.12	+1.4
3,585,076	+		IAI47_16905	0.12	-0.1
3,585,076	+		IAI47_16905	0.12	+0.0
3,585,077	-		IAI47_16905	0.12	+0.9
3,585,077	-		IAI47_16905	0.12	+0.1
3,585,085	+		IAI47_16905	0.12	-0.5
3,585,097	+		IAI47_16905	0.13	+0.2
3,585,097	+		IAI47_16905	0.13	+1.4
3,585,097	+		IAI47_16905	0.13	-0.6
3,585,097	+		IAI47_16905	0.13	-0.1
3,585,097	+		IAI47_16905	0.13	+1.0
3,585,097	+		IAI47_16905	0.13	-0.3
3,585,097	+		IAI47_16905	0.13	+1.4
3,585,097	+		IAI47_16905	0.13	+0.5
3,585,097	+		IAI47_16905	0.13	-0.8
3,585,097	+		IAI47_16905	0.13	+2.4
3,585,097	+		IAI47_16905	0.13	-1.7
3,585,097	+		IAI47_16905	0.13	-1.8
3,585,097	+		IAI47_16905	0.13	-0.3
3,585,097	+		IAI47_16905	0.13	+0.1
3,585,097	+		IAI47_16905	0.13	-0.6
3,585,098	-		IAI47_16905	0.13	-0.5
3,585,098	-		IAI47_16905	0.13	-0.8
3,585,098	-		IAI47_16905	0.13	-0.3
3,585,098	-		IAI47_16905	0.13	+0.2
3,585,098	-		IAI47_16905	0.13	+0.9
3,585,098	-		IAI47_16905	0.13	-0.1
3,585,098	-		IAI47_16905	0.13	+0.5
3,585,209	+		IAI47_16905	0.19	-0.3
3,585,209	+		IAI47_16905	0.19	+0.1
3,585,209	+		IAI47_16905	0.19	+0.4
3,585,209	+		IAI47_16905	0.19	-2.1
3,585,209	+		IAI47_16905	0.19	+0.7
3,585,209	+		IAI47_16905	0.19	+0.8
3,585,209	+		IAI47_16905	0.19	-1.9
3,585,209	+		IAI47_16905	0.19	-1.0
3,585,209	+		IAI47_16905	0.19	+0.3
3,585,209	+		IAI47_16905	0.19	-0.2
3,585,209	+				-0.9
3,585,209	+		IAI47_16905	0.19	-0.4
3,585,209	+		IAI47_16905	0.19	-0.2
3,585,209	+		IAI47_16905	0.19	+1.3
3,585,209	+		IAI47_16905	0.19	-0.4
3,585,209	+		IAI47_16905	0.19	+0.9
3,585,210	-		IAI47_16905	0.19	-0.1
3,585,210	-		IAI47_16905	0.19	+0.1
3,585,210	-		IAI47_16905	0.19	+0.3
3,585,210	-		IAI47_16905	0.19	+0.2
3,585,210	-		IAI47_16905	0.19	-0.6
3,585,225	+		IAI47_16905	0.20	+1.1
3,585,225	+		IAI47_16905	0.20	-0.6
3,585,269	+		IAI47_16905	0.23	+0.1
3,585,304	+		IAI47_16905	0.25	-0.9
3,585,304	+		IAI47_16905	0.25	+1.8
3,585,304	+		IAI47_16905	0.25	-1.0
3,585,304	+		IAI47_16905	0.25	+1.5
3,585,305	-		IAI47_16905	0.25	-0.0
3,585,305	-		IAI47_16905	0.25	+0.7
3,585,323	-		IAI47_16905	0.26	-1.5
3,585,361	+		IAI47_16905	0.28	-1.1
3,585,421	+		IAI47_16905	0.31	-0.1
3,585,422	-		IAI47_16905	0.31	-0.2
3,585,422	-		IAI47_16905	0.31	+0.6