Strain Fitness in Pantoea sp. MT58 around IAI47_09760

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,064,127	-				-0.0
2,064,252	+				+0.3
2,064,253	-				+2.7
2,064,253	-				+2.6
2,064,253	-				+2.7
2,064,320	-		IAI47_09755	0.11	+1.2
2,064,320	-		IAI47_09755	0.11	+0.8
2,064,321	+		IAI47_09755	0.11	+1.9
2,064,347	+		IAI47_09755	0.15	+1.5
2,064,347	+		IAI47_09755	0.15	-0.0
2,064,347	+		IAI47_09755	0.15	+0.6
2,064,348	-		IAI47_09755	0.15	+1.6
2,064,349	+		IAI47_09755	0.15	+2.6
2,064,349	+		IAI47_09755	0.15	+1.6
2,064,349	+		IAI47_09755	0.15	+2.9
2,064,349	+		IAI47_09755	0.15	+1.4
2,064,350	-		IAI47_09755	0.15	+1.7
2,064,350	-		IAI47_09755	0.15	+1.3
2,064,350	-		IAI47_09755	0.15	-1.3
2,064,350	-		IAI47_09755	0.15	+1.0
2,064,350	-		IAI47_09755	0.15	+0.6
2,064,350	-		IAI47_09755	0.15	-1.2
2,064,350	-		IAI47_09755	0.15	+1.2
2,064,355	+		IAI47_09755	0.16	+2.8
2,064,355	+		IAI47_09755	0.16	+1.2
2,064,374	-		IAI47_09755	0.19	-1.4
2,064,394	+		IAI47_09755	0.22	-0.6
2,064,394	+		IAI47_09755	0.22	+1.6
2,064,443	+		IAI47_09755	0.29	+0.5
2,064,444	-		IAI47_09755	0.29	-1.0
2,064,444	-		IAI47_09755	0.29	+1.6
2,064,513	-		IAI47_09755	0.39	+2.8
2,064,535	-		IAI47_09755	0.42	-0.0
2,064,757	+		IAI47_09755	0.74	+0.0
2,064,757	+		IAI47_09755	0.74	-0.6
2,064,842	+		IAI47_09755	0.86	+3.7
2,064,843	-		IAI47_09755	0.86	+3.5
2,064,843	-		IAI47_09755	0.86	+2.6
2,064,847	-		IAI47_09755	0.87	+0.7
2,064,878	+				+1.6
2,064,878	+				+1.8
2,064,878	+				+1.4
2,064,878	+				+0.1
2,064,878	+				+1.9
2,064,878	+				+0.6
2,064,878	+				+0.9
2,064,878	+				+2.4
2,064,878	+				+1.6
2,064,878	+				+2.5
2,064,878	+				+1.2
2,064,878	+				+3.6
2,064,878	+				-0.1
2,064,878	+				+0.4
2,064,879	-				-1.2
2,064,879	-				+2.9
2,064,879	-				+1.2
2,064,879	-				+1.6
2,064,879	-				+0.9
2,064,879	-				+1.8
2,064,879	-				+3.4
2,064,879	-				-0.5
2,064,879	-				+1.2
2,064,879	-				+1.1
2,064,879	-				+0.4
2,064,879	-				+0.6
2,064,879	-				+1.7
2,064,886	+				+0.9
2,064,887	-				+2.2
2,064,942	+				-1.6
2,064,942	+				+0.7
2,065,024	+				-1.6
2,065,025	-				-3.1
2,065,026	+				-0.2
2,065,026	+				-1.4
2,065,026	+				+0.6
2,065,048	+				-0.1
2,065,049	-				+2.7
2,065,086	+				+2.0
2,065,087	-				+0.6
2,065,114	+				+1.3
2,065,114	+				+0.7
2,065,149	+				+1.6
2,065,149	+				+1.2
2,065,149	+				-0.7
2,065,149	+				-2.2
2,065,149	+				-1.7
2,065,149	+				-2.5
2,065,149	+				-1.7
2,065,149	+				+0.3
2,065,150	-				-0.1
2,065,150	-				+0.8
2,065,150	-				-0.1
2,065,150	-				-0.5
2,065,150	-				+1.7
2,065,151	+				-0.4
2,065,151	+				+1.4
2,065,151	+				+1.3
2,065,152	-				-0.4
2,065,152	-				+1.7
2,065,152	-				-0.0
2,065,221	+				+0.6
2,065,222	-				-0.5
2,065,232	-				+0.4
2,065,249	+				-0.3
2,065,250	-				-0.4
2,065,250	-				+0.4
2,065,269	+		IAI47_09760	0.11	+0.1
2,065,270	-		IAI47_09760	0.11	+1.2
2,065,270	-		IAI47_09760	0.11	-1.2
2,065,270	-		IAI47_09760	0.11	-0.4
2,065,278	-		IAI47_09760	0.11	-0.3
2,065,278	-		IAI47_09760	0.11	+0.7
2,065,286	+		IAI47_09760	0.12	+1.2
2,065,286	+		IAI47_09760	0.12	+0.2
2,065,286	+		IAI47_09760	0.12	-0.5
2,065,286	+		IAI47_09760	0.12	-0.3
2,065,286	+		IAI47_09760	0.12	-0.4
2,065,287	-		IAI47_09760	0.12	+1.2
2,065,293	+		IAI47_09760	0.12	-0.8
2,065,293	+		IAI47_09760	0.12	-1.2
2,065,321	-		IAI47_09760	0.15	-0.2
2,065,330	+		IAI47_09760	0.15	+0.7
2,065,331	-		IAI47_09760	0.15	-0.8
2,065,331	-		IAI47_09760	0.15	+0.3
2,065,331	-		IAI47_09760	0.15	-1.2
2,065,349	+		IAI47_09760	0.17	+0.2
2,065,350	-		IAI47_09760	0.17	-0.5
2,065,350	-		IAI47_09760	0.17	-1.1
2,065,576	+		IAI47_09760	0.33	-0.3
2,065,576	+		IAI47_09760	0.33	-0.6
2,065,576	+		IAI47_09760	0.33	-1.9
2,065,576	+		IAI47_09760	0.33	+1.0
2,065,576	+		IAI47_09760	0.33	+1.3
2,065,577	-		IAI47_09760	0.33	-0.8
2,065,782	+		IAI47_09760	0.48	+0.6
2,065,782	+		IAI47_09760	0.48	-1.7
2,065,783	-		IAI47_09760	0.48	+0.5
2,065,795	-		IAI47_09760	0.49	+0.4
2,065,795	-		IAI47_09760	0.49	-1.0
2,065,795	-		IAI47_09760	0.49	+0.5
2,065,830	+		IAI47_09760	0.51	-0.0
2,065,830	+		IAI47_09760	0.51	-0.2
2,065,830	+		IAI47_09760	0.51	-1.4
2,065,830	+		IAI47_09760	0.51	+0.7
2,065,873	+		IAI47_09760	0.55	+0.0
2,065,873	+		IAI47_09760	0.55	-0.8
2,065,873	+		IAI47_09760	0.55	+1.0
2,065,874	-		IAI47_09760	0.55	+0.9
2,065,874	-		IAI47_09760	0.55	+1.2
2,066,056	+		IAI47_09760	0.68	-0.0
2,066,057	-		IAI47_09760	0.68	+0.2
2,066,057	-		IAI47_09760	0.68	-0.7
2,066,114	+		IAI47_09760	0.72	+0.5
2,066,118	+		IAI47_09760	0.72	-0.4
2,066,118	+		IAI47_09760	0.72	-0.8
2,066,118	+		IAI47_09760	0.72	+0.4
2,066,118	+		IAI47_09760	0.72	+0.9
2,066,119	-		IAI47_09760	0.72	-0.7
2,066,119	-		IAI47_09760	0.72	+0.2
2,066,130	+		IAI47_09760	0.73	+0.1
2,066,130	+		IAI47_09760	0.73	+0.7
2,066,130	+		IAI47_09760	0.73	-0.2
2,066,130	+		IAI47_09760	0.73	-0.6
2,066,130	+		IAI47_09760	0.73	+0.0
2,066,130	+		IAI47_09760	0.73	+0.4
2,066,130	+		IAI47_09760	0.73	-0.1
2,066,130	+		IAI47_09760	0.73	-1.2
2,066,131	-		IAI47_09760	0.73	+0.2
2,066,131	-		IAI47_09760	0.73	-0.3
2,066,131	-		IAI47_09760	0.73	+0.3
2,066,137	+		IAI47_09760	0.74	-2.4
2,066,137	+		IAI47_09760	0.74	-1.2
2,066,137	+		IAI47_09760	0.74	-0.5
2,066,137	+		IAI47_09760	0.74	+0.5
2,066,137	+		IAI47_09760	0.74	+0.6
2,066,138	-		IAI47_09760	0.74	+2.6
2,066,138	-		IAI47_09760	0.74	+1.1
2,066,219	-		IAI47_09760	0.80	+0.4
2,066,219	-		IAI47_09760	0.80	-0.5
2,066,219	-		IAI47_09760	0.80	+0.2
2,066,219	-		IAI47_09760	0.80	-0.8
2,066,219	-		IAI47_09760	0.80	+0.2
2,066,349	+		IAI47_09760	0.89	-0.6
2,066,374	+				+1.2
2,066,374	+				-1.3
2,066,375	-				-1.6
2,066,410	+				-1.1
2,066,411	-				+1.3
2,066,422	+				-0.3
2,066,423	-				-0.2
2,066,437	-				-0.5
2,066,495	+				+0.9
2,066,585	+				+0.8
2,066,585	+				-0.8
2,066,585	+				+0.7
2,066,585	+				-2.4
2,066,586	-				+1.5
2,066,586	-				+0.7
2,066,586	-				-0.6
2,066,586	-				-1.1
2,066,593	+				+0.3
2,066,671	+				-0.2
2,066,671	+				-1.0
2,066,671	+				-0.8
2,066,671	+				+0.8
2,066,672	-				+0.4
2,066,672	-				-0.6
2,066,692	-				+0.2
2,066,697	-				+0.5
2,066,705	+				+2.7
2,066,705	+				+0.5
2,066,705	+				-1.2
2,066,705	+				+0.8
2,066,705	+				+1.2
2,066,705	+				+1.0
2,066,706	-				-1.0
2,066,706	-				+0.7
2,066,706	-				-0.3
2,066,708	+				-1.5
2,066,708	+				-0.8
2,066,708	+				-0.2
2,066,708	+				-2.5
2,066,709	-				+0.7
2,066,709	-				+1.2
2,066,709	-				+0.8
2,066,720	+				-1.0
2,066,720	+				-1.3
2,066,730	+				-1.8
2,066,730	+				-0.8
2,066,730	+				+0.5
2,066,731	-				-0.6
2,066,731	-				-0.0
2,066,731	-				+1.6
2,066,731	-				-2.1
2,066,753	+				-1.6
2,066,754	-				-1.6
2,066,781	+				+0.9
2,066,781	+				-1.2
2,066,781	+				-0.7
2,066,781	+				+0.7
2,066,782	-				+0.2
2,066,782	-				+0.2
2,066,782	-				-1.2
2,066,782	-				-1.2
2,066,782	-				-0.1
2,066,783	+				-0.4
2,066,783	+				+2.1
2,066,783	+				-1.3
2,066,783	+				-0.3
2,066,783	+				-0.8
2,066,783	+				-1.2
2,066,783	+				+0.0
2,066,783	+				+1.0
2,066,784	-				+0.4
2,066,784	-				+2.0
2,066,784	-				-0.7
2,066,784	-				-0.6
2,066,784	-				-2.2
2,066,784	-				-0.5
2,066,784	-				+1.5
2,066,789	+				-1.2
2,066,789	+				+1.5
2,066,790	-				-0.2
2,066,792	+				+0.8
2,066,792	+				+2.1
2,066,793	-				-0.3
2,066,793	-				-1.2
2,066,793	-				-0.7
2,066,793	-				+0.7
2,066,800	+				+0.5
2,066,801	-				+0.8
2,066,801	-				-0.3
2,066,840	-				-0.6
2,066,852	-				+0.9
2,066,852	-				-0.3
2,066,852	-				+1.3
2,066,876	-				-0.4
2,066,876	-				-1.0
2,066,912	+				-1.5
2,066,912	+				-0.5
2,066,912	+				-0.0
2,066,912	+				-0.4
2,066,912	+				-1.7
2,066,912	+				+1.7
2,066,913	-		IAI47_09765	0.10	-0.8
2,066,913	-		IAI47_09765	0.10	+0.4
2,066,913	-		IAI47_09765	0.10	+1.1
2,066,923	+		IAI47_09765	0.11	-1.2
2,066,924	-		IAI47_09765	0.11	+0.5
2,067,015	-		IAI47_09765	0.19	+0.2
2,067,050	+		IAI47_09765	0.22	-1.0
2,067,050	+		IAI47_09765	0.22	+1.5
2,067,051	-		IAI47_09765	0.22	+2.8
2,067,051	-		IAI47_09765	0.22	-1.1
2,067,051	-		IAI47_09765	0.22	+0.4
2,067,051	-		IAI47_09765	0.22	-0.1
2,067,051	-		IAI47_09765	0.22	-1.5
2,067,072	-		IAI47_09765	0.24	+1.1
2,067,083	+		IAI47_09765	0.25	+0.2
2,067,084	-				-1.4
2,067,084	-		IAI47_09765	0.25	+1.6
2,067,183	+		IAI47_09765	0.34	+1.4
2,067,184	-		IAI47_09765	0.34	-1.9
2,067,195	-		IAI47_09765	0.35	-1.3
2,067,195	-		IAI47_09765	0.35	+1.8
2,067,195	-		IAI47_09765	0.35	-0.4
2,067,195	-		IAI47_09765	0.35	-1.4
2,067,285	-		IAI47_09765	0.43	-1.2
2,067,413	+		IAI47_09765	0.54	+0.4
2,067,492	-		IAI47_09765	0.61	-0.7