Strain Fitness in Pantoea sp. MT58 around IAI47_09755

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,063,281	+		IAI47_09750	0.30	-0.2
2,063,281	+		IAI47_09750	0.30	-1.5
2,063,281	+		IAI47_09750	0.30	-0.6
2,063,282	-		IAI47_09750	0.30	+0.6
2,063,282	-		IAI47_09750	0.30	-0.2
2,063,293	+		IAI47_09750	0.31	-0.1
2,063,293	+		IAI47_09750	0.31	+0.9
2,063,296	+		IAI47_09750	0.32	-1.5
2,063,297	-		IAI47_09750	0.32	-1.8
2,063,360	+		IAI47_09750	0.37	-0.4
2,063,360	+		IAI47_09750	0.37	-2.6
2,063,418	+		IAI47_09750	0.42	+2.0
2,063,432	+		IAI47_09750	0.43	-1.4
2,063,649	-		IAI47_09750	0.61	-1.9
2,063,656	+		IAI47_09750	0.61	-0.2
2,063,656	+		IAI47_09750	0.61	-0.8
2,063,656	+		IAI47_09750	0.61	-0.6
2,063,657	-		IAI47_09750	0.61	-1.6
2,063,664	+		IAI47_09750	0.62	+1.5
2,063,664	+		IAI47_09750	0.62	+1.0
2,063,680	-		IAI47_09750	0.63	-0.8
2,063,680	-		IAI47_09750	0.63	-1.6
2,063,710	+		IAI47_09750	0.66	-1.7
2,063,918	+		IAI47_09750	0.83	-0.0
2,063,918	+		IAI47_09750	0.83	-0.5
2,063,918	+		IAI47_09750	0.83	-1.2
2,063,918	+		IAI47_09750	0.83	-0.7
2,063,918	+		IAI47_09750	0.83	+0.9
2,063,918	+		IAI47_09750	0.83	-1.2
2,063,918	+		IAI47_09750	0.83	-1.6
2,063,919	-		IAI47_09750	0.83	-0.4
2,063,919	-		IAI47_09750	0.83	-0.7
2,063,919	-		IAI47_09750	0.83	-2.9
2,063,919	-		IAI47_09750	0.83	-0.2
2,063,919	-		IAI47_09750	0.83	-1.4
2,063,919	-		IAI47_09750	0.83	-1.2
2,063,919	-		IAI47_09750	0.83	-0.5
2,063,924	+		IAI47_09750	0.83	-0.2
2,063,924	+		IAI47_09750	0.83	+1.5
2,063,925	-		IAI47_09750	0.83	-0.9
2,063,927	-		IAI47_09750	0.83	-0.9
2,063,927	-		IAI47_09750	0.83	-1.8
2,064,006	+		IAI47_09750	0.90	+0.8
2,064,006	+		IAI47_09750	0.90	-2.6
2,064,007	-				+0.4
2,064,007	-				-1.2
2,064,007	-				+1.6
2,064,017	+				-0.5
2,064,017	+				-0.2
2,064,017	+				-2.6
2,064,018	-				+1.0
2,064,018	-				-0.2
2,064,090	+				-0.8
2,064,090	+				+0.6
2,064,091	-				-2.0
2,064,107	-				+1.2
2,064,127	-				-0.0
2,064,252	+				+0.3
2,064,253	-				+2.7
2,064,253	-				+2.6
2,064,253	-				+2.7
2,064,320	-		IAI47_09755	0.11	+1.2
2,064,320	-		IAI47_09755	0.11	+0.8
2,064,321	+		IAI47_09755	0.11	+1.9
2,064,347	+		IAI47_09755	0.15	+1.5
2,064,347	+		IAI47_09755	0.15	-0.0
2,064,347	+		IAI47_09755	0.15	+0.6
2,064,348	-		IAI47_09755	0.15	+1.6
2,064,349	+		IAI47_09755	0.15	+2.6
2,064,349	+		IAI47_09755	0.15	+1.6
2,064,349	+		IAI47_09755	0.15	+2.9
2,064,349	+		IAI47_09755	0.15	+1.4
2,064,350	-		IAI47_09755	0.15	+1.7
2,064,350	-		IAI47_09755	0.15	+1.3
2,064,350	-		IAI47_09755	0.15	-1.3
2,064,350	-		IAI47_09755	0.15	+1.0
2,064,350	-		IAI47_09755	0.15	+0.6
2,064,350	-		IAI47_09755	0.15	-1.2
2,064,350	-		IAI47_09755	0.15	+1.2
2,064,355	+		IAI47_09755	0.16	+2.8
2,064,355	+		IAI47_09755	0.16	+1.2
2,064,374	-		IAI47_09755	0.19	-1.4
2,064,394	+		IAI47_09755	0.22	-0.6
2,064,394	+		IAI47_09755	0.22	+1.6
2,064,443	+		IAI47_09755	0.29	+0.5
2,064,444	-		IAI47_09755	0.29	-1.0
2,064,444	-		IAI47_09755	0.29	+1.6
2,064,513	-		IAI47_09755	0.39	+2.8
2,064,535	-		IAI47_09755	0.42	-0.0
2,064,757	+		IAI47_09755	0.74	+0.0
2,064,757	+		IAI47_09755	0.74	-0.6
2,064,842	+		IAI47_09755	0.86	+3.7
2,064,843	-		IAI47_09755	0.86	+3.5
2,064,843	-		IAI47_09755	0.86	+2.6
2,064,847	-		IAI47_09755	0.87	+0.7
2,064,878	+				+1.6
2,064,878	+				+1.8
2,064,878	+				+1.4
2,064,878	+				+0.1
2,064,878	+				+1.9
2,064,878	+				+0.6
2,064,878	+				+0.9
2,064,878	+				+2.4
2,064,878	+				+1.6
2,064,878	+				+2.5
2,064,878	+				+1.2
2,064,878	+				+3.6
2,064,878	+				-0.1
2,064,878	+				+0.4
2,064,879	-				-1.2
2,064,879	-				+2.9
2,064,879	-				+1.2
2,064,879	-				+1.6
2,064,879	-				+0.9
2,064,879	-				+1.8
2,064,879	-				+3.4
2,064,879	-				-0.5
2,064,879	-				+1.2
2,064,879	-				+1.1
2,064,879	-				+0.4
2,064,879	-				+0.6
2,064,879	-				+1.7
2,064,886	+				+0.9
2,064,887	-				+2.2
2,064,942	+				-1.6
2,064,942	+				+0.7
2,065,024	+				-1.6
2,065,025	-				-3.1
2,065,026	+				-0.2
2,065,026	+				-1.4
2,065,026	+				+0.6
2,065,048	+				-0.1
2,065,049	-				+2.7
2,065,086	+				+2.0
2,065,087	-				+0.6
2,065,114	+				+1.3
2,065,114	+				+0.7
2,065,149	+				+1.6
2,065,149	+				+1.2
2,065,149	+				-0.7
2,065,149	+				-2.2
2,065,149	+				-1.7
2,065,149	+				-2.5
2,065,149	+				-1.7
2,065,149	+				+0.3
2,065,150	-				-0.1
2,065,150	-				+0.8
2,065,150	-				-0.1
2,065,150	-				-0.5
2,065,150	-				+1.7
2,065,151	+				-0.4
2,065,151	+				+1.4
2,065,151	+				+1.3
2,065,152	-				-0.4
2,065,152	-				+1.7
2,065,152	-				-0.0
2,065,221	+				+0.6
2,065,222	-				-0.5
2,065,232	-				+0.4
2,065,249	+				-0.3
2,065,250	-				-0.4
2,065,250	-				+0.4
2,065,269	+		IAI47_09760	0.11	+0.1
2,065,270	-		IAI47_09760	0.11	+1.2
2,065,270	-		IAI47_09760	0.11	-1.2
2,065,270	-		IAI47_09760	0.11	-0.4
2,065,278	-		IAI47_09760	0.11	-0.3
2,065,278	-		IAI47_09760	0.11	+0.7
2,065,286	+		IAI47_09760	0.12	+1.2
2,065,286	+		IAI47_09760	0.12	+0.2
2,065,286	+		IAI47_09760	0.12	-0.5
2,065,286	+		IAI47_09760	0.12	-0.3
2,065,286	+		IAI47_09760	0.12	-0.4
2,065,287	-		IAI47_09760	0.12	+1.2
2,065,293	+		IAI47_09760	0.12	-0.8
2,065,293	+		IAI47_09760	0.12	-1.2
2,065,321	-		IAI47_09760	0.15	-0.2
2,065,330	+		IAI47_09760	0.15	+0.7
2,065,331	-		IAI47_09760	0.15	-0.8
2,065,331	-		IAI47_09760	0.15	+0.3
2,065,331	-		IAI47_09760	0.15	-1.2
2,065,349	+		IAI47_09760	0.17	+0.2
2,065,350	-		IAI47_09760	0.17	-0.5
2,065,350	-		IAI47_09760	0.17	-1.1
2,065,576	+		IAI47_09760	0.33	-0.3
2,065,576	+		IAI47_09760	0.33	-0.6
2,065,576	+		IAI47_09760	0.33	-1.9
2,065,576	+		IAI47_09760	0.33	+1.0
2,065,576	+		IAI47_09760	0.33	+1.3
2,065,577	-		IAI47_09760	0.33	-0.8
2,065,782	+		IAI47_09760	0.48	+0.6
2,065,782	+		IAI47_09760	0.48	-1.7
2,065,783	-		IAI47_09760	0.48	+0.5
2,065,795	-		IAI47_09760	0.49	+0.4
2,065,795	-		IAI47_09760	0.49	-1.0
2,065,795	-		IAI47_09760	0.49	+0.5
2,065,830	+		IAI47_09760	0.51	-0.0
2,065,830	+		IAI47_09760	0.51	-0.2
2,065,830	+		IAI47_09760	0.51	-1.4
2,065,830	+		IAI47_09760	0.51	+0.7
2,065,873	+		IAI47_09760	0.55	+0.0
2,065,873	+		IAI47_09760	0.55	-0.8
2,065,873	+		IAI47_09760	0.55	+1.0
2,065,874	-		IAI47_09760	0.55	+0.9
2,065,874	-		IAI47_09760	0.55	+1.2