Strain Fitness in Pantoea sp. MT58 around IAI47_08830

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,864,990	+				-0.6
1,864,991	-				+1.7
1,865,045	+				+0.4
1,865,077	+				+0.9
1,865,077	+				+1.7
1,865,078	-				-0.0
1,865,117	-				+1.3
1,865,150	+				+0.9
1,865,151	-				+0.9
1,865,155	+				-0.1
1,865,155	+				+0.8
1,865,155	+				-0.1
1,865,155	+				-0.7
1,865,158	+				+2.1
1,865,158	+				-1.9
1,865,158	+				-0.7
1,865,845	+				+2.3
1,865,845	+				-0.5
1,865,845	+				-0.7
1,865,877	-				-0.1
1,865,903	+				+0.5
1,865,903	+				+1.7
1,865,903	+				+0.4
1,865,903	+				-1.0
1,865,903	+				+1.1
1,865,903	+				+0.8
1,865,903	+				-0.7
1,865,904	-				+0.4
1,865,904	-				-0.6
1,865,909	+				-0.6
1,865,909	+				-0.2
1,865,910	-				+0.1
1,865,910	-				+0.3
1,865,910	-				+1.1
1,865,910	-				-0.6
1,865,910	-				-1.7
1,865,922	+				-2.8
1,865,923	-				+0.1
1,865,923	-				-0.3
1,865,923	-				+0.4
1,865,934	+				-1.5
1,865,935	-				+1.4
1,865,949	+				-1.1
1,865,949	+				+0.0
1,865,949	+				+1.1
1,865,949	+				+0.2
1,865,950	-				-2.9
1,865,950	-				-0.5
1,865,950	-				-0.9
1,865,950	-				+0.8
1,865,950	-				+0.7
1,865,967	+				-1.1
1,865,967	+				-0.3
1,866,148	-		IAI47_08830	0.33	-0.8
1,866,241	+		IAI47_08830	0.49	+0.2
1,866,242	-		IAI47_08830	0.49	-0.3
1,866,242	-		IAI47_08830	0.49	-1.2
1,866,242	-		IAI47_08830	0.49	+0.0
1,866,289	+		IAI47_08830	0.57	+0.1
1,866,289	+		IAI47_08830	0.57	-1.5
1,866,289	+		IAI47_08830	0.57	-0.5
1,866,290	-		IAI47_08830	0.57	+0.1
1,866,290	-		IAI47_08830	0.57	-0.7
1,866,290	-		IAI47_08830	0.57	-0.4
1,866,290	-		IAI47_08830	0.57	-1.5
1,866,290	-		IAI47_08830	0.57	-0.3
1,866,290	-		IAI47_08830	0.57	-2.8
1,866,290	-		IAI47_08830	0.57	-0.3
1,866,290	-		IAI47_08830	0.57	+0.2
1,866,371	+		IAI47_08830	0.71	-0.5
1,866,371	+		IAI47_08830	0.71	+0.3
1,866,379	+		IAI47_08830	0.72	-1.2
1,866,408	-		IAI47_08830	0.77	-0.5
1,866,445	+		IAI47_08830	0.83	+1.4
1,866,445	+		IAI47_08830	0.83	+0.7
1,866,445	+		IAI47_08830	0.83	-1.7
1,866,446	-		IAI47_08830	0.83	+0.7
1,866,472	+		IAI47_08830	0.87	-0.5
1,866,498	+				+1.3
1,866,498	+				-0.4
1,866,499	-				-2.0
1,866,505	-				-1.0
1,866,505	-				-1.7
1,866,533	+				+0.2
1,866,533	+				-1.3
1,866,533	+				+1.7
1,866,534	-				+0.1
1,866,599	+				+0.5
1,866,600	-				-0.5
1,866,600	-				+0.0
1,866,628	-				+1.1
1,866,728	+				+0.3
1,866,728	+				+1.5
1,866,728	+				+0.7
1,866,728	+				+0.5
1,866,728	+				+0.2
1,866,728	+				+2.9
1,866,729	-				-1.5
1,866,729	-				-0.1
1,866,729	-				+0.9
1,866,729	-				+0.9
1,866,729	-				+0.5
1,866,735	+				+1.3
1,866,735	+				+2.3
1,866,735	+				+0.3
1,866,735	+				+0.8
1,866,735	+				-0.3
1,866,735	+				-1.4
1,866,736	-				-0.1
1,866,736	-				+0.4
1,866,736	-				+0.9
1,866,736	-				+0.5
1,866,736	-				+0.2
1,866,736	-				+1.2
1,866,759	+				-0.1
1,866,759	+				+1.5
1,866,759	+				+0.5
1,866,760	-				-0.6
1,866,760	-				-0.1
1,866,803	+				-0.3
1,866,803	+				+0.2
1,866,804	-				-1.1
1,866,804	-				+0.3
1,866,804	-				-1.5
1,866,817	+				-1.2
1,866,818	-				+0.6
1,866,818	-				+0.7
1,866,818	-				+0.4
1,866,860	-				+0.0
1,866,880	-				+0.6
1,866,881	+				+0.7
1,866,881	+				-0.4
1,866,881	+				+0.3
1,866,904	+				-1.1
1,866,904	+				-0.6
1,866,904	+				-0.2
1,866,905	-				-0.5
1,866,905	-				+0.1
1,866,943	+		IAI47_08835	0.11	+1.5
1,866,943	+		IAI47_08835	0.11	-0.9
1,866,943	+		IAI47_08835	0.11	-2.3
1,866,999	+		IAI47_08835	0.15	+0.8
1,866,999	+		IAI47_08835	0.15	+1.3
1,867,000	-		IAI47_08835	0.15	+0.3
1,867,000	-		IAI47_08835	0.15	-0.7
1,867,000	-		IAI47_08835	0.15	-1.7
1,867,000	-		IAI47_08835	0.15	-1.8
1,867,004	+		IAI47_08835	0.15	+1.4
1,867,004	+		IAI47_08835	0.15	-0.8
1,867,004	+		IAI47_08835	0.15	+2.0
1,867,004	+		IAI47_08835	0.15	+0.5
1,867,005	-		IAI47_08835	0.15	-1.1
1,867,005	-		IAI47_08835	0.15	-0.3
1,867,005	-		IAI47_08835	0.15	-0.0
1,867,065	+		IAI47_08835	0.19	+1.5
1,867,075	+		IAI47_08835	0.19	+0.1
1,867,076	-		IAI47_08835	0.19	+0.5
1,867,076	-		IAI47_08835	0.19	-0.5
1,867,076	-		IAI47_08835	0.19	+0.3
1,867,077	+		IAI47_08835	0.19	-1.9
1,867,077	+		IAI47_08835	0.19	+0.4
1,867,077	+		IAI47_08835	0.19	-1.4
1,867,077	+		IAI47_08835	0.19	+1.8
1,867,078	-		IAI47_08835	0.19	-1.6
1,867,078	-		IAI47_08835	0.19	+0.3
1,867,078	-		IAI47_08835	0.19	+0.3
1,867,229	+		IAI47_08835	0.28	-0.7
1,867,245	+		IAI47_08835	0.29	+0.3
1,867,246	-		IAI47_08835	0.29	+1.7
1,867,251	+		IAI47_08835	0.30	+1.0
1,867,261	+		IAI47_08835	0.30	+0.6
1,867,261	+		IAI47_08835	0.30	+0.7
1,867,261	+		IAI47_08835	0.30	-0.5
1,867,261	+		IAI47_08835	0.30	-0.1
1,867,261	+		IAI47_08835	0.30	+1.8
1,867,261	+		IAI47_08835	0.30	-0.4
1,867,262	-		IAI47_08835	0.30	+2.8
1,867,262	-		IAI47_08835	0.30	-0.8
1,867,281	+		IAI47_08835	0.31	+0.1
1,867,281	+		IAI47_08835	0.31	+0.8
1,867,281	+		IAI47_08835	0.31	+0.3
1,867,281	+		IAI47_08835	0.31	+0.5
1,867,281	+		IAI47_08835	0.31	-0.5
1,867,282	-		IAI47_08835	0.31	-0.3
1,867,282	-		IAI47_08835	0.31	+0.8
1,867,282	-		IAI47_08835	0.31	+0.4
1,867,285	+		IAI47_08835	0.32	+0.3
1,867,285	+		IAI47_08835	0.32	+0.5
1,867,285	+		IAI47_08835	0.32	-1.3
1,867,285	+		IAI47_08835	0.32	-0.6
1,867,285	+		IAI47_08835	0.32	+2.3
1,867,285	+		IAI47_08835	0.32	+0.5
1,867,286	-		IAI47_08835	0.32	+0.1
1,867,286	-		IAI47_08835	0.32	+1.7
1,867,286	-		IAI47_08835	0.32	-0.6
1,867,286	-		IAI47_08835	0.32	-1.0
1,867,286	-		IAI47_08835	0.32	+0.7
1,867,345	+		IAI47_08835	0.35	-2.1
1,867,390	+		IAI47_08835	0.38	+0.4
1,867,391	-		IAI47_08835	0.38	-1.6
1,867,412	+		IAI47_08835	0.39	+2.3
1,867,478	-		IAI47_08835	0.43	-0.4
1,867,531	+		IAI47_08835	0.46	+1.7
1,867,531	+		IAI47_08835	0.46	-0.2
1,867,532	-		IAI47_08835	0.46	+0.9