Strain Fitness in Pantoea sp. MT58 around IAI47_06915

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,451,440	+		IAI47_06905	0.54	+1.6
1,451,491	+		IAI47_06905	0.62	+1.4
1,451,524	+		IAI47_06905	0.67	+1.2
1,451,524	+		IAI47_06905	0.67	+0.6
1,451,524	+		IAI47_06905	0.67	+0.9
1,451,524	+		IAI47_06905	0.67	-0.4
1,451,525	-		IAI47_06905	0.67	-2.2
1,451,542	+		IAI47_06905	0.69	+0.7
1,451,542	+		IAI47_06905	0.69	-0.8
1,451,597	+		IAI47_06905	0.78	+0.8
1,451,598	-		IAI47_06905	0.78	-1.0
1,451,632	+		IAI47_06905	0.83	+3.4
1,451,632	+		IAI47_06905	0.83	-0.8
1,451,651	+		IAI47_06905	0.86	-0.1
1,451,702	-				+0.2
1,451,796	-				-0.4
1,451,801	+				-0.2
1,451,801	+				+0.8
1,451,801	+				+0.6
1,451,801	+				+1.2
1,451,801	+				+0.5
1,451,802	-				-0.4
1,451,802	-				+0.5
1,451,802	-				+0.5
1,451,802	-				-1.5
1,451,802	-				-0.5
1,451,904	+		IAI47_06910	0.14	+0.1
1,451,905	-		IAI47_06910	0.14	-0.7
1,451,935	-		IAI47_06910	0.20	-0.4
1,452,186	+		IAI47_06910	0.63	-0.1
1,452,222	+		IAI47_06910	0.69	+0.8
1,452,222	+		IAI47_06910	0.69	+0.2
1,452,222	+		IAI47_06910	0.69	-0.5
1,452,239	-		IAI47_06910	0.72	-1.2
1,452,239	-		IAI47_06910	0.72	+1.7
1,452,239	-		IAI47_06910	0.72	-0.3
1,452,276	+		IAI47_06910	0.78	+0.7
1,452,277	-		IAI47_06910	0.78	+1.9
1,452,277	-		IAI47_06910	0.78	-1.8
1,452,331	+		IAI47_06910	0.88	+0.1
1,452,331	+		IAI47_06910	0.88	-0.2
1,452,331	+		IAI47_06910	0.88	-1.0
1,452,331	+		IAI47_06910	0.88	-0.6
1,452,331	+		IAI47_06910	0.88	-0.2
1,452,331	+		IAI47_06910	0.88	+0.1
1,452,331	+		IAI47_06910	0.88	+1.0
1,452,331	+		IAI47_06910	0.88	-0.4
1,452,332	-		IAI47_06910	0.88	-1.1
1,452,332	-		IAI47_06910	0.88	-0.5
1,452,333	+		IAI47_06910	0.88	-1.7
1,452,334	-		IAI47_06910	0.88	-0.8
1,452,356	-				-0.3
1,452,413	+				+1.5
1,452,413	+				-1.2
1,452,413	+				-3.2
1,452,413	+				-0.9
1,452,413	+				+0.1
1,452,414	-				-1.8
1,452,414	-				-1.6
1,452,414	-				-3.2
1,452,414	-				-3.2
1,452,428	+				-0.7
1,452,428	+				-0.1
1,452,461	+				+1.4
1,452,514	+				-3.2
1,452,514	+				-0.9
1,452,514	+				-1.5
1,452,514	+				-0.7
1,452,514	+				-0.3
1,452,514	+				-1.4
1,452,514	+				-0.6
1,452,514	+				+0.4
1,452,514	+				-1.9
1,452,514	+				-1.2
1,452,514	+				-0.5
1,452,515	-				-0.2
1,452,515	-				-0.1
1,452,515	-				+1.0
1,452,515	-				-2.4
1,452,515	-				-0.1
1,452,515	-				+1.1
1,452,515	-				-0.6
1,452,515	-				-1.2
1,452,515	-				-0.9
1,452,515	-				-2.4
1,452,515	-				+1.4
1,452,515	-				-0.4
1,452,516	+				+0.5
1,452,516	+				+0.2
1,452,516	+				+0.5
1,452,516	+				-0.7
1,452,516	+				-0.8
1,452,516	+				-1.8
1,452,516	+				-2.6
1,452,516	+				-1.3
1,452,516	+				-1.8
1,452,517	-				-2.1
1,452,517	-				-0.6
1,452,517	-				-1.4
1,452,517	-				-0.5
1,452,517	-				-1.5
1,452,517	-				-0.8
1,452,517	-				+0.7
1,452,517	-				-0.6
1,452,517	-				-1.5
1,452,695	+		IAI47_06915	0.15	+1.4
1,452,695	+		IAI47_06915	0.15	-0.4
1,452,695	+		IAI47_06915	0.15	-0.9
1,452,695	+		IAI47_06915	0.15	-1.2
1,452,696	-		IAI47_06915	0.15	-1.4
1,452,696	-		IAI47_06915	0.15	-0.5
1,452,696	-		IAI47_06915	0.15	-1.2
1,452,696	-		IAI47_06915	0.15	+0.4
1,452,698	+		IAI47_06915	0.16	+0.5
1,452,699	-		IAI47_06915	0.16	-1.7
1,452,699	-		IAI47_06915	0.16	-0.8
1,452,743	+		IAI47_06915	0.18	-0.9
1,452,765	+		IAI47_06915	0.19	-1.3
1,452,853	-		IAI47_06915	0.24	-1.2
1,452,907	+		IAI47_06915	0.27	-2.3
1,452,907	+		IAI47_06915	0.27	-0.0
1,452,907	+		IAI47_06915	0.27	-0.5
1,452,908	-		IAI47_06915	0.27	-0.7
1,452,908	-		IAI47_06915	0.27	-0.8
1,452,908	-		IAI47_06915	0.27	-0.1
1,452,908	-		IAI47_06915	0.27	+2.8
1,452,930	+		IAI47_06915	0.28	-2.1
1,452,930	+		IAI47_06915	0.28	-0.9
1,452,930	+		IAI47_06915	0.28	-2.2
1,452,931	-		IAI47_06915	0.28	-2.7
1,452,931	-		IAI47_06915	0.28	-1.2
1,452,931	-		IAI47_06915	0.28	-0.3
1,453,088	+		IAI47_06915	0.37	+0.8
1,453,119	+		IAI47_06915	0.39	+0.8
1,453,176	+		IAI47_06915	0.42	-1.3
1,453,177	-		IAI47_06915	0.42	-1.8
1,453,177	-		IAI47_06915	0.42	-2.2
1,453,206	+		IAI47_06915	0.43	-1.1
1,453,206	+		IAI47_06915	0.43	-1.3
1,453,206	+		IAI47_06915	0.43	-0.7
1,453,207	-		IAI47_06915	0.43	-0.5
1,453,207	-		IAI47_06915	0.43	-1.0
1,453,207	-		IAI47_06915	0.43	-1.3
1,453,383	+		IAI47_06915	0.53	-1.1
1,453,383	+		IAI47_06915	0.53	+0.1
1,453,384	-		IAI47_06915	0.53	+0.2
1,453,449	-		IAI47_06915	0.57	-1.0
1,453,491	+		IAI47_06915	0.59	+0.8
1,453,491	+		IAI47_06915	0.59	+1.8
1,453,492	-		IAI47_06915	0.59	-2.2
1,453,518	+		IAI47_06915	0.60	-1.3
1,453,519	-		IAI47_06915	0.61	-1.8
1,453,519	-		IAI47_06915	0.61	+0.5
1,453,519	-		IAI47_06915	0.61	-2.4
1,453,519	-		IAI47_06915	0.61	+2.2
1,453,524	+		IAI47_06915	0.61	-1.6
1,453,524	+		IAI47_06915	0.61	-2.0
1,453,525	-		IAI47_06915	0.61	-1.7
1,453,540	-		IAI47_06915	0.62	-0.8
1,453,573	-		IAI47_06915	0.63	-2.5
1,453,573	-		IAI47_06915	0.63	+0.7
1,453,675	-		IAI47_06915	0.69	-0.3
1,453,788	+		IAI47_06915	0.75	+0.1
1,453,788	+		IAI47_06915	0.75	-1.4
1,453,789	-		IAI47_06915	0.75	+0.2
1,453,789	-		IAI47_06915	0.75	-1.0
1,453,789	-		IAI47_06915	0.75	-2.4
1,453,834	-		IAI47_06915	0.78	-3.6
1,453,834	-		IAI47_06915	0.78	+0.9
1,453,834	-		IAI47_06915	0.78	-2.0
1,453,834	-		IAI47_06915	0.78	-1.3
1,453,867	-		IAI47_06915	0.80	-1.7
1,453,908	-		IAI47_06915	0.82	-1.0
1,453,908	-		IAI47_06915	0.82	-1.6
1,453,952	+		IAI47_06915	0.84	-0.6
1,453,952	+		IAI47_06915	0.84	+0.3
1,453,952	+		IAI47_06915	0.84	-0.5
1,454,067	+				-0.4
1,454,067	+				-0.2
1,454,068	-				-0.8
1,454,079	+				+2.0
1,454,079	+				+1.0
1,454,079	+				-1.7
1,454,079	+				-0.5
1,454,079	+				+0.2
1,454,079	+				+0.7
1,454,079	+				-1.8
1,454,079	+				-1.2
1,454,079	+				+0.4
1,454,079	+				-0.8
1,454,080	-				+1.1
1,454,080	-				-1.6
1,454,080	-				-1.3
1,454,080	-				+2.3
1,454,080	-				-0.6
1,454,080	-				+1.0
1,454,080	-				+0.1
1,454,080	-				+0.4
1,454,080	-				+0.6
1,454,080	-				-0.8
1,454,080	-				+0.6
1,454,080	-				+0.4
1,454,083	+				-1.6
1,454,083	+				-0.8
1,454,083	+				-1.3
1,454,083	+				+0.5
1,454,083	+				-2.1
1,454,083	+				+0.4
1,454,083	+				-2.0
1,454,083	+				+1.8
1,454,083	+				-0.0
1,454,084	-				+1.4
1,454,084	-				-0.8
1,454,084	-				-1.2
1,454,084	-				-1.3
1,454,084	-				+0.1
1,454,136	+				+0.5
1,454,237	-				+1.2
1,454,270	+				-1.8
1,454,270	+				-1.5
1,454,270	+				+1.5
1,454,272	+				+0.1
1,454,273	-				+0.0
1,454,273	-				+0.7
1,454,273	-				+0.8
1,454,273	-				-0.8
1,454,273	-				-0.6
1,454,279	+				-1.2
1,454,354	+				-0.6
1,454,354	+				+0.7
1,454,354	+				+0.5
1,454,354	+				+0.4
1,454,404	-				-1.7
1,454,413	+				-1.7
1,454,413	+				+1.4
1,454,413	+				+1.8
1,454,413	+				+0.1
1,454,414	-				-0.1
1,454,414	-				+0.8
1,454,414	-				-0.9
1,454,427	+		IAI47_06920	0.10	+1.2
1,454,427	+		IAI47_06920	0.10	-0.0
1,454,427	+		IAI47_06920	0.10	-0.1
1,454,427	+		IAI47_06920	0.10	-1.4
1,454,427	+		IAI47_06920	0.10	-1.3
1,454,427	+		IAI47_06920	0.10	+0.4
1,454,428	-		IAI47_06920	0.10	-1.5
1,454,428	-		IAI47_06920	0.10	-0.3
1,454,428	-		IAI47_06920	0.10	+0.3
1,454,432	+		IAI47_06920	0.10	+0.4
1,454,432	+		IAI47_06920	0.10	+0.4
1,454,432	+		IAI47_06920	0.10	-1.1
1,454,433	-		IAI47_06920	0.10	+0.6
1,454,433	-		IAI47_06920	0.10	-0.3
1,454,465	+		IAI47_06920	0.12	+0.3
1,454,465	+		IAI47_06920	0.12	+0.4
1,454,465	+		IAI47_06920	0.12	-2.2
1,454,465	+		IAI47_06920	0.12	+0.2
1,454,466	-		IAI47_06920	0.13	-1.0
1,454,466	-		IAI47_06920	0.13	+1.2
1,454,466	-		IAI47_06920	0.13	+1.1
1,454,466	-		IAI47_06920	0.13	+0.6
1,454,490	+		IAI47_06920	0.14	+0.7
1,454,491	-		IAI47_06920	0.14	+0.4
1,454,491	-		IAI47_06920	0.14	-2.0
1,454,491	-		IAI47_06920	0.14	+0.1
1,454,491	-		IAI47_06920	0.14	-2.1
1,454,491	-		IAI47_06920	0.14	-0.7
1,454,530	+		IAI47_06920	0.17	-1.0
1,454,530	+		IAI47_06920	0.17	+0.4
1,454,530	+		IAI47_06920	0.17	-0.3
1,454,530	+		IAI47_06920	0.17	-1.8
1,454,530	+		IAI47_06920	0.17	+0.5
1,454,530	+		IAI47_06920	0.17	-2.6
1,454,530	+		IAI47_06920	0.17	-0.9
1,454,530	+		IAI47_06920	0.17	-0.8
1,454,531	-		IAI47_06920	0.17	-1.4
1,454,531	-		IAI47_06920	0.17	+0.8
1,454,533	-		IAI47_06920	0.17	-0.4
1,454,533	-		IAI47_06920	0.17	+0.7
1,454,659	-		IAI47_06920	0.25	+0.2
1,454,741	-		IAI47_06920	0.30	-0.7
1,454,754	+		IAI47_06920	0.31	+0.9
1,454,754	+		IAI47_06920	0.31	-1.1
1,454,754	+		IAI47_06920	0.31	+1.1
1,454,754	+		IAI47_06920	0.31	+0.3
1,454,755	-		IAI47_06920	0.31	-0.5
1,454,755	-		IAI47_06920	0.31	+0.4
1,454,755	-		IAI47_06920	0.31	+0.1
1,454,895	+		IAI47_06920	0.40	+1.5
1,454,896	-		IAI47_06920	0.40	-2.0
1,454,928	+		IAI47_06920	0.42	-0.2
1,454,928	+		IAI47_06920	0.42	+0.9
1,454,928	+		IAI47_06920	0.42	+1.6
1,454,928	+		IAI47_06920	0.42	+4.2
1,454,928	+		IAI47_06920	0.42	-2.0
1,454,929	-		IAI47_06920	0.42	+0.5
1,454,929	-		IAI47_06920	0.42	-1.1
1,454,929	-		IAI47_06920	0.42	-0.1
1,454,929	-		IAI47_06920	0.42	+0.3
1,454,929	-		IAI47_06920	0.42	+1.8
1,454,929	-		IAI47_06920	0.42	+0.1
1,454,929	-		IAI47_06920	0.42	-0.9
1,454,929	-		IAI47_06920	0.42	+0.8
1,454,932	-		IAI47_06920	0.42	+1.1
1,454,932	-		IAI47_06920	0.42	+0.3
1,454,932	-		IAI47_06920	0.42	-0.7
1,455,076	+		IAI47_06920	0.51	+1.0
1,455,076	+		IAI47_06920	0.51	+0.9
1,455,076	+		IAI47_06920	0.51	+0.3
1,455,077	-		IAI47_06920	0.51	+0.8
1,455,077	-		IAI47_06920	0.51	-1.1
1,455,077	-		IAI47_06920	0.51	-0.5
1,455,077	-		IAI47_06920	0.51	-1.3
1,455,077	-		IAI47_06920	0.51	+0.7
1,455,077	-		IAI47_06920	0.51	-0.5
1,455,077	-		IAI47_06920	0.51	-0.4
1,455,077	-		IAI47_06920	0.51	+0.3
1,455,077	-		IAI47_06920	0.51	-1.5
1,455,080	-		IAI47_06920	0.52	+1.0
1,455,139	-		IAI47_06920	0.55	-0.2
1,455,158	-		IAI47_06920	0.57	-0.4
1,455,200	+		IAI47_06920	0.59	-0.6
1,455,201	-		IAI47_06920	0.59	-0.5
1,455,207	+		IAI47_06920	0.60	+1.9
1,455,207	+		IAI47_06920	0.60	+0.1