Strain Fitness in Pantoea sp. MT58 around IAI47_18560

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,949,404	-		IAI47_18555	0.56	+0.1
3,949,404	-		IAI47_18555	0.56	-1.8
3,949,404	-		IAI47_18555	0.56	-2.2
3,949,442	+		IAI47_18555	0.58	-2.6
3,949,458	+		IAI47_18555	0.59	-1.4
3,949,459	-		IAI47_18555	0.59	+0.3
3,949,459	-		IAI47_18555	0.59	+1.2
3,949,474	+		IAI47_18555	0.59	+0.3
3,949,643	+		IAI47_18555	0.68	+1.7
3,949,643	+		IAI47_18555	0.68	-1.6
3,949,643	+		IAI47_18555	0.68	-1.0
3,949,643	+		IAI47_18555	0.68	+0.7
3,949,644	-		IAI47_18555	0.68	-1.7
3,949,644	-		IAI47_18555	0.68	+1.2
3,949,644	-		IAI47_18555	0.68	+1.3
3,949,644	-		IAI47_18555	0.68	-0.5
3,949,719	+		IAI47_18555	0.71	-2.8
3,949,719	+		IAI47_18555	0.71	+0.8
3,949,719	+		IAI47_18555	0.71	-0.9
3,949,719	+		IAI47_18555	0.71	+0.1
3,949,720	-		IAI47_18555	0.71	-0.4
3,949,720	-		IAI47_18555	0.71	-1.5
3,949,720	-		IAI47_18555	0.71	-0.0
3,949,721	+		IAI47_18555	0.71	-2.0
3,949,722	-		IAI47_18555	0.71	-1.2
3,949,722	-		IAI47_18555	0.71	-1.6
3,949,722	-		IAI47_18555	0.71	-0.1
3,949,722	-		IAI47_18555	0.71	-0.3
3,949,754	-		IAI47_18555	0.73	-0.2
3,949,754	-		IAI47_18555	0.73	+0.9
3,949,754	-		IAI47_18555	0.73	-0.4
3,949,815	+		IAI47_18555	0.76	-0.8
3,949,815	+		IAI47_18555	0.76	+0.0
3,949,815	+		IAI47_18555	0.76	-0.2
3,949,815	+		IAI47_18555	0.76	-1.2
3,949,815	+		IAI47_18555	0.76	-0.0
3,949,815	+		IAI47_18555	0.76	+1.2
3,949,816	-		IAI47_18555	0.76	+1.2
3,949,816	-		IAI47_18555	0.76	-1.7
3,949,816	-		IAI47_18555	0.76	+1.1
3,949,884	+		IAI47_18555	0.79	+0.6
3,949,885	-		IAI47_18555	0.79	-1.9
3,949,947	+		IAI47_18555	0.82	-1.3
3,949,947	+		IAI47_18555	0.82	+0.8
3,949,947	+		IAI47_18555	0.82	+0.9
3,949,947	+		IAI47_18555	0.82	-0.4
3,949,971	+		IAI47_18555	0.84	-0.6
3,949,972	-		IAI47_18555	0.84	-1.6
3,949,972	-		IAI47_18555	0.84	-0.8
3,949,972	-		IAI47_18555	0.84	+0.5
3,949,972	-		IAI47_18555	0.84	+1.9
3,949,972	-		IAI47_18555	0.84	-0.6
3,949,972	-		IAI47_18555	0.84	+0.6
3,949,972	-		IAI47_18555	0.84	-0.3
3,949,978	+		IAI47_18555	0.84	+1.5
3,949,979	-		IAI47_18555	0.84	-0.6
3,949,979	-		IAI47_18555	0.84	+0.2
3,950,005	+		IAI47_18555	0.85	+0.5
3,950,006	-		IAI47_18555	0.85	-0.7
3,950,061	+		IAI47_18555	0.88	+1.1
3,950,061	+		IAI47_18555	0.88	+0.1
3,950,061	+		IAI47_18555	0.88	+0.1
3,950,061	+		IAI47_18555	0.88	-1.0
3,950,061	+		IAI47_18555	0.88	-0.9
3,950,061	+		IAI47_18555	0.88	+1.4
3,950,062	-		IAI47_18555	0.88	-1.6
3,950,062	-		IAI47_18555	0.88	+0.4
3,950,062	-		IAI47_18555	0.88	-0.7
3,950,062	-		IAI47_18555	0.88	-1.4
3,950,062	-		IAI47_18555	0.88	-0.2
3,950,062	-		IAI47_18555	0.88	-0.7
3,950,064	+		IAI47_18555	0.88	+0.1
3,950,065	-		IAI47_18555	0.88	+0.2
3,950,173	+				+0.0
3,950,173	+				+0.6
3,950,174	-				-1.2
3,950,196	+				-0.3
3,950,196	+				-0.5
3,950,229	+				+0.3
3,950,229	+				+0.3
3,950,229	+				-0.0
3,950,229	+				+1.3
3,950,244	+				-0.5
3,950,271	+				-1.4
3,950,271	+				+0.7
3,950,272	-				-1.3
3,950,272	-				-1.6
3,950,279	-				+0.5
3,950,279	-				-0.9
3,950,311	+				+0.2
3,950,311	+				-1.6
3,950,311	+				-1.4
3,950,312	-				-0.7
3,950,312	-				-0.0
3,950,312	-				-0.7
3,950,312	-				-1.1
3,950,312	-				+1.0
3,950,350	+				+0.2
3,950,351	-				-1.3
3,950,351	-				-0.6
3,950,432	+				-0.1
3,950,433	-				+0.4
3,950,433	-				-1.5
3,950,436	-				-0.4
3,950,436	-				+0.4
3,950,436	-				-2.0
3,950,517	+		IAI47_18560	0.18	+0.4
3,950,517	+		IAI47_18560	0.18	-0.4
3,950,518	-		IAI47_18560	0.19	-0.3
3,950,518	-		IAI47_18560	0.19	+0.4
3,950,518	-		IAI47_18560	0.19	-0.4
3,950,529	+		IAI47_18560	0.20	+0.3
3,950,586	+		IAI47_18560	0.27	-1.9
3,950,586	+		IAI47_18560	0.27	-0.8
3,950,586	+		IAI47_18560	0.27	+0.0
3,950,587	-		IAI47_18560	0.28	+1.4
3,950,587	-		IAI47_18560	0.28	-1.0
3,950,587	-		IAI47_18560	0.28	+1.3
3,950,587	-		IAI47_18560	0.28	-0.0
3,950,589	+		IAI47_18560	0.28	-1.5
3,950,590	-		IAI47_18560	0.28	+1.6
3,950,590	-		IAI47_18560	0.28	+1.6
3,950,590	-		IAI47_18560	0.28	+2.1
3,950,615	+		IAI47_18560	0.31	+0.5
3,950,615	+		IAI47_18560	0.31	+1.2
3,950,615	+		IAI47_18560	0.31	+0.9
3,950,615	+		IAI47_18560	0.31	-1.2
3,950,616	-		IAI47_18560	0.31	+0.1
3,950,616	-		IAI47_18560	0.31	-1.8
3,950,621	+		IAI47_18560	0.32	-0.6
3,950,621	+		IAI47_18560	0.32	+0.2
3,950,622	-		IAI47_18560	0.32	+0.5
3,950,655	+		IAI47_18560	0.36	+1.4
3,950,655	+		IAI47_18560	0.36	-0.5
3,950,655	+		IAI47_18560	0.36	+1.6
3,950,656	-		IAI47_18560	0.36	+2.0
3,950,755	+		IAI47_18560	0.49	+1.2
3,950,755	+		IAI47_18560	0.49	+1.1
3,950,756	-		IAI47_18560	0.49	-1.8
3,950,756	-		IAI47_18560	0.49	+0.8
3,950,827	+		IAI47_18560	0.59	-2.0
3,950,827	+		IAI47_18560	0.59	-0.8
3,950,827	+		IAI47_18560	0.59	-0.7
3,950,827	+		IAI47_18560	0.59	-0.7
3,950,827	+		IAI47_18560	0.59	+1.1
3,950,827	+		IAI47_18560	0.59	+0.6
3,950,827	+		IAI47_18560	0.59	-0.1
3,950,827	+		IAI47_18560	0.59	-0.1
3,950,827	+		IAI47_18560	0.59	+0.1
3,950,827	+		IAI47_18560	0.59	+0.4
3,950,827	+		IAI47_18560	0.59	+0.4
3,950,828	-		IAI47_18560	0.59	-0.3
3,951,013	+		IAI47_18560	0.83	+1.4
3,951,013	+		IAI47_18560	0.83	+0.3
3,951,013	+		IAI47_18560	0.83	-1.7
3,951,013	+		IAI47_18560	0.83	-1.5
3,951,013	+		IAI47_18560	0.83	+1.5
3,951,013	+		IAI47_18560	0.83	+1.1
3,951,014	-		IAI47_18560	0.83	+0.1
3,951,014	-		IAI47_18560	0.83	+1.5
3,951,014	-		IAI47_18560	0.83	-0.5
3,951,014	-		IAI47_18560	0.83	+0.3
3,951,014	-		IAI47_18560	0.83	+0.4
3,951,032	+		IAI47_18560	0.85	+1.5
3,951,032	+		IAI47_18560	0.85	+1.4
3,951,032	+		IAI47_18560	0.85	+1.4
3,951,032	+		IAI47_18560	0.85	-1.4
3,951,033	-		IAI47_18560	0.85	+1.5
3,951,099	+				-1.1
3,951,100	-				-0.1
3,951,100	-				+0.2
3,951,129	+				+0.2
3,951,129	+				+1.1
3,951,130	-				-0.4
3,951,130	-				-0.9
3,951,132	+				-0.3
3,951,132	+				+0.0
3,951,132	+				+1.4
3,951,132	+				+1.2
3,951,133	-				+0.6
3,951,133	-				-1.0
3,951,133	-				-0.5
3,951,133	-				+0.3
3,951,133	-				-0.9
3,951,150	+				-0.2
3,951,150	+				+1.4
3,951,150	+				-2.0
3,951,150	+				-0.4
3,951,150	+				-0.0
3,951,150	+				+0.3
3,951,150	+				-0.4
3,951,150	+				-0.9
3,951,150	+				+1.3
3,951,150	+				+3.0
3,951,151	-				-0.0
3,951,151	-				-0.8
3,951,151	-				+0.0
3,951,151	-				+1.2
3,951,151	-				-0.4
3,951,151	-				+1.2
3,951,151	-				-2.6
3,951,151	-				-1.8
3,951,151	-				+0.4
3,951,165	+				-0.0
3,951,165	+				-0.8
3,951,216	-				-0.6
3,951,216	-				-1.5
3,951,216	-				-1.2
3,951,218	+				-1.0
3,951,218	+				+0.4
3,951,218	+				+2.3
3,951,218	+				-1.0
3,951,218	+				+1.4
3,951,218	+				-1.2
3,951,218	+				+1.0
3,951,218	+				+0.0
3,951,219	-				-1.5
3,951,219	-				-0.6
3,951,219	-				-0.2
3,951,240	+				-0.0
3,951,241	-				+0.4
3,951,241	-				-1.8
3,951,241	-				-0.1
3,951,241	-				-0.2
3,951,274	+				-0.4
3,951,274	+				+0.9
3,951,275	-				+2.2
3,951,381	+				+1.0
3,951,381	+				+0.6
3,951,381	+				+0.0
3,951,396	+				+2.5
3,951,396	+				-0.0
3,951,405	-				+1.0
3,951,405	-				-0.6
3,951,450	+				-1.3
3,951,450	+				+0.7
3,951,523	-		IAI47_18565	0.10	-0.4
3,951,523	-		IAI47_18565	0.10	+0.7
3,951,523	-		IAI47_18565	0.10	-0.7
3,951,523	-		IAI47_18565	0.10	-0.8
3,951,535	+		IAI47_18565	0.12	+1.3
3,951,535	+		IAI47_18565	0.12	-0.5
3,951,535	+		IAI47_18565	0.12	-0.4
3,951,535	+		IAI47_18565	0.12	-0.9
3,951,535	+		IAI47_18565	0.12	+1.9
3,951,536	-		IAI47_18565	0.12	-1.1
3,951,577	+		IAI47_18565	0.16	+2.1
3,951,577	+		IAI47_18565	0.16	+0.5
3,951,577	+		IAI47_18565	0.16	-1.5
3,951,577	+		IAI47_18565	0.16	-0.3
3,951,577	+		IAI47_18565	0.16	+0.6
3,951,577	+		IAI47_18565	0.16	-0.7
3,951,577	+		IAI47_18565	0.16	+1.1
3,951,578	-		IAI47_18565	0.16	-0.6
3,951,578	-		IAI47_18565	0.16	-0.6
3,951,578	-		IAI47_18565	0.16	-1.3
3,951,578	-		IAI47_18565	0.16	-2.3
3,951,578	-		IAI47_18565	0.16	+0.1
3,951,578	-		IAI47_18565	0.16	-0.5
3,951,578	-		IAI47_18565	0.16	-0.7
3,951,648	+		IAI47_18565	0.24	-0.8
3,951,675	+		IAI47_18565	0.27	-0.3
3,951,675	+		IAI47_18565	0.27	+1.1
3,951,675	+		IAI47_18565	0.27	+0.1
3,951,676	-		IAI47_18565	0.27	+1.2
3,951,676	-		IAI47_18565	0.27	-0.6
3,951,676	-		IAI47_18565	0.27	-1.3
3,951,676	-		IAI47_18565	0.27	-0.5
3,951,691	+		IAI47_18565	0.28	-0.1
3,951,691	+		IAI47_18565	0.28	-0.0
3,951,691	+		IAI47_18565	0.28	+0.1
3,951,691	+		IAI47_18565	0.28	+0.8
3,951,691	+		IAI47_18565	0.28	+1.3
3,951,691	+				-0.2
3,951,691	+		IAI47_18565	0.28	+0.1
3,951,691	-		IAI47_18565	0.28	+0.2
3,951,692	-		IAI47_18565	0.28	-2.1
3,951,692	-		IAI47_18565	0.28	+0.1
3,951,692	-		IAI47_18565	0.28	-0.0
3,951,692	-		IAI47_18565	0.28	+0.0
3,951,692	-		IAI47_18565	0.28	-0.6
3,951,692	-		IAI47_18565	0.28	-1.4
3,951,692	-		IAI47_18565	0.28	+0.5
3,951,692	-		IAI47_18565	0.28	-1.1
3,951,692	-		IAI47_18565	0.28	-0.1
3,951,723	+		IAI47_18565	0.32	+0.3
3,951,723	+		IAI47_18565	0.32	+0.7
3,951,723	+		IAI47_18565	0.32	+0.2
3,951,724	-		IAI47_18565	0.32	-1.8
3,951,724	-		IAI47_18565	0.32	-2.4
3,951,771	+		IAI47_18565	0.37	-2.3
3,951,771	+		IAI47_18565	0.37	-1.8
3,951,792	-		IAI47_18565	0.39	-0.8
3,951,792	-		IAI47_18565	0.39	+0.7
3,951,811	+		IAI47_18565	0.41	-2.8
3,951,811	+		IAI47_18565	0.41	+0.3
3,951,811	+		IAI47_18565	0.41	+1.5
3,951,817	+		IAI47_18565	0.42	-1.5
3,951,817	+		IAI47_18565	0.42	-0.2
3,951,817	+		IAI47_18565	0.42	-1.4
3,951,817	+		IAI47_18565	0.42	-1.1
3,951,817	+		IAI47_18565	0.42	-1.1
3,951,818	-		IAI47_18565	0.42	-2.1
3,951,818	-		IAI47_18565	0.42	+1.2
3,951,818	-		IAI47_18565	0.42	-1.6
3,951,823	+		IAI47_18565	0.42	-0.4
3,951,823	+		IAI47_18565	0.42	+0.9
3,951,823	+		IAI47_18565	0.42	+0.7
3,951,824	-		IAI47_18565	0.43	-1.1
3,951,846	+		IAI47_18565	0.45	+1.0
3,951,846	+		IAI47_18565	0.45	+1.2
3,951,875	+		IAI47_18565	0.48	+0.2
3,951,875	+		IAI47_18565	0.48	-0.1
3,951,876	-		IAI47_18565	0.48	+0.9
3,951,885	-		IAI47_18565	0.49	+4.8
3,951,885	-		IAI47_18565	0.49	+0.5
3,951,927	+		IAI47_18565	0.54	+0.9
3,951,927	+		IAI47_18565	0.54	-1.3
3,951,928	-		IAI47_18565	0.54	+0.4
3,951,928	-		IAI47_18565	0.54	-2.3
3,951,930	+		IAI47_18565	0.54	-2.1
3,951,930	+		IAI47_18565	0.54	+0.3
3,951,930	+		IAI47_18565	0.54	-0.0
3,951,930	+		IAI47_18565	0.54	+0.9
3,951,930	+		IAI47_18565	0.54	+0.3
3,951,930	+		IAI47_18565	0.54	-0.6
3,951,930	+		IAI47_18565	0.54	-1.7
3,951,931	-		IAI47_18565	0.54	-2.3
3,951,931	-		IAI47_18565	0.54	+1.4
3,951,931	-		IAI47_18565	0.54	+1.1
3,951,934	+		IAI47_18565	0.54	+0.0
3,951,934	+		IAI47_18565	0.54	+1.9
3,951,934	+		IAI47_18565	0.54	-0.2
3,951,934	+		IAI47_18565	0.54	-0.0
3,951,934	+		IAI47_18565	0.54	-0.6
3,951,935	-		IAI47_18565	0.54	+0.0
3,951,948	-		IAI47_18565	0.56	-1.8
3,951,948	-		IAI47_18565	0.56	+2.8
3,951,979	+		IAI47_18565	0.59	+0.3
3,951,979	+		IAI47_18565	0.59	-0.0
3,951,999	+		IAI47_18565	0.61	+0.1
3,951,999	+		IAI47_18565	0.61	-0.1
3,951,999	+		IAI47_18565	0.61	+0.2
3,952,000	-		IAI47_18565	0.61	-0.6
3,952,000	-		IAI47_18565	0.61	+0.2
3,952,000	-		IAI47_18565	0.61	-0.3
3,952,004	-		IAI47_18565	0.62	-0.9