Strain Fitness in Pantoea sp. MT58 around IAI47_17420

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,689,721	-				-0.9
3,689,722	+				+1.6
3,689,722	+				-1.5
3,689,723	-				-0.9
3,689,723	-				+0.8
3,689,723	-				+0.8
3,689,723	-				-1.8
3,689,734	+				-1.2
3,689,734	+				-1.0
3,689,735	-				+0.7
3,689,735	-				+1.0
3,689,825	-				+0.6
3,690,085	-		IAI47_17415	0.35	-2.0
3,690,087	+		IAI47_17415	0.35	-0.2
3,690,087	+		IAI47_17415	0.35	+0.3
3,690,088	-		IAI47_17415	0.36	-2.0
3,690,088	-		IAI47_17415	0.36	+0.4
3,690,088	-		IAI47_17415	0.36	-1.6
3,690,088	-		IAI47_17415	0.36	-2.0
3,690,126	+		IAI47_17415	0.43	+2.9
3,690,154	-		IAI47_17415	0.48	-1.2
3,690,222	-		IAI47_17415	0.61	-1.3
3,690,222	-		IAI47_17415	0.61	-4.0
3,690,222	-		IAI47_17415	0.61	-0.9
3,690,222	-		IAI47_17415	0.61	+0.2
3,690,222	-		IAI47_17415	0.61	-2.0
3,690,222	-		IAI47_17415	0.61	-1.2
3,690,258	+		IAI47_17415	0.68	-1.4
3,690,258	+		IAI47_17415	0.68	-1.6
3,690,258	+		IAI47_17415	0.68	+0.9
3,690,258	+		IAI47_17415	0.68	+0.3
3,690,258	+		IAI47_17415	0.68	-0.2
3,690,313	-		IAI47_17415	0.78	-3.4
3,690,313	-		IAI47_17415	0.78	-1.1
3,690,313	-		IAI47_17415	0.78	-1.5
3,690,329	-		IAI47_17415	0.81	-3.2
3,690,329	-		IAI47_17415	0.81	+0.5
3,690,329	-		IAI47_17415	0.81	-1.0
3,690,329	-		IAI47_17415	0.81	-1.9
3,690,329	-		IAI47_17415	0.81	-3.5
3,690,329	-		IAI47_17415	0.81	-0.7
3,690,545	+				+0.4
3,690,699	-				-0.5
3,690,699	-				-2.6
3,690,741	+				+2.4
3,690,741	+				-1.6
3,690,741	+				+0.2
3,690,749	+				+0.9
3,690,781	-		IAI47_17420	0.16	-2.8
3,690,781	-		IAI47_17420	0.16	-1.0
3,690,781	-		IAI47_17420	0.16	-2.4
3,690,781	-		IAI47_17420	0.16	-0.1
3,690,781	-		IAI47_17420	0.16	-1.8
3,690,843	+		IAI47_17420	0.27	+0.8
3,690,843	+		IAI47_17420	0.27	-0.9
3,690,845	+		IAI47_17420	0.28	-0.3
3,690,845	+		IAI47_17420	0.28	+0.6
3,690,845	+		IAI47_17420	0.28	-0.2
3,690,845	+		IAI47_17420	0.28	-0.4
3,690,882	+		IAI47_17420	0.35	+0.6
3,690,883	-		IAI47_17420	0.35	-1.8
3,690,883	-		IAI47_17420	0.35	-2.2
3,690,885	+		IAI47_17420	0.35	-0.6
3,690,885	+		IAI47_17420	0.35	-0.2
3,690,885	+		IAI47_17420	0.35	+0.2
3,690,885	+		IAI47_17420	0.35	+0.3
3,690,885	+		IAI47_17420	0.35	+1.9
3,690,886	-		IAI47_17420	0.35	-1.3
3,690,886	-		IAI47_17420	0.35	-0.6
3,690,886	-		IAI47_17420	0.35	-1.4
3,690,886	-		IAI47_17420	0.35	-0.0
3,690,886	-		IAI47_17420	0.35	-0.7
3,690,886	-		IAI47_17420	0.35	-1.1
3,690,886	-		IAI47_17420	0.35	+1.1
3,690,886	-		IAI47_17420	0.35	+0.3
3,690,886	-		IAI47_17420	0.35	-3.2
3,690,914	+		IAI47_17420	0.41	+0.0
3,690,915	-		IAI47_17420	0.41	-3.1
3,690,918	+		IAI47_17420	0.41	-0.6
3,690,918	+		IAI47_17420	0.41	-0.2
3,690,918	+		IAI47_17420	0.41	+1.0
3,690,918	+		IAI47_17420	0.41	-1.4
3,690,918	+		IAI47_17420	0.41	-0.4
3,690,919	-		IAI47_17420	0.42	+0.2
3,690,924	+		IAI47_17420	0.43	+0.8
3,690,925	-		IAI47_17420	0.43	-1.9
3,690,925	-		IAI47_17420	0.43	-0.1
3,691,056	+		IAI47_17420	0.67	+1.4
3,691,056	+		IAI47_17420	0.67	-0.1
3,691,056	+		IAI47_17420	0.67	+1.6
3,691,056	+		IAI47_17420	0.67	+0.2
3,691,056	+		IAI47_17420	0.67	-1.6
3,691,063	+		IAI47_17420	0.69	+2.1
3,691,063	+		IAI47_17420	0.69	+0.3
3,691,063	+		IAI47_17420	0.69	-0.1
3,691,063	+		IAI47_17420	0.69	+0.1
3,691,063	+		IAI47_17420	0.69	+2.5
3,691,063	+		IAI47_17420	0.69	-0.8
3,691,063	+		IAI47_17420	0.69	-0.9
3,691,063	+		IAI47_17420	0.69	-0.9
3,691,063	+		IAI47_17420	0.69	-0.2
3,691,063	+		IAI47_17420	0.69	-1.9
3,691,111	-		IAI47_17420	0.78	-2.1
3,691,111	-		IAI47_17420	0.78	-1.1
3,691,205	-				-2.8
3,691,205	-				-1.0
3,691,340	+				-1.4
3,691,496	-				-0.7
3,691,680	+		IAI47_17425	0.34	+0.2
3,691,680	+		IAI47_17425	0.34	+0.5
3,691,680	+		IAI47_17425	0.34	+1.8
3,691,681	-		IAI47_17425	0.34	-2.7
3,691,681	-		IAI47_17425	0.34	-0.9
3,691,681	-		IAI47_17425	0.34	-2.6
3,691,681	-		IAI47_17425	0.34	+1.1
3,691,715	+		IAI47_17425	0.41	-2.6
3,691,715	+		IAI47_17425	0.41	-1.6
3,691,715	+		IAI47_17425	0.41	+0.2
3,691,715	+		IAI47_17425	0.41	-0.2
3,691,715	+		IAI47_17425	0.41	+0.5
3,691,715	+		IAI47_17425	0.41	-0.0
3,691,716	-		IAI47_17425	0.41	-0.8
3,691,716	-		IAI47_17425	0.41	+0.4
3,691,716	-		IAI47_17425	0.41	+0.4
3,691,716	-		IAI47_17425	0.41	-0.2
3,691,716	-		IAI47_17425	0.41	-2.4
3,691,716	-		IAI47_17425	0.41	-1.9
3,691,719	+		IAI47_17425	0.42	+0.1
3,691,754	+		IAI47_17425	0.48	+1.3
3,691,820	+		IAI47_17425	0.61	-0.8
3,691,820	+		IAI47_17425	0.61	-0.1
3,691,820	+		IAI47_17425	0.61	-0.4
3,691,847	+		IAI47_17425	0.66	-1.1
3,691,864	+		IAI47_17425	0.69	+0.3
3,691,865	-		IAI47_17425	0.69	-1.1
3,691,865	-		IAI47_17425	0.69	-2.4
3,691,865	-		IAI47_17425	0.69	-0.7
3,691,865	-		IAI47_17425	0.69	-1.2
3,691,865	-		IAI47_17425	0.69	+1.2
3,691,928	-		IAI47_17425	0.81	-1.2
3,691,928	-		IAI47_17425	0.81	-3.4
3,691,928	-		IAI47_17425	0.81	-2.4
3,692,013	-				-0.4
3,692,013	-				-2.0
3,692,013	-				-2.9
3,692,021	-				-0.8
3,692,032	-				-0.1
3,692,100	+				+1.1
3,692,100	+				+1.8
3,692,107	+				-0.6
3,692,107	+				+0.1
3,692,120	+				+1.8