Strain Fitness in Pantoea sp. MT58 around IAI47_15065

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,176,319	-		IAI47_15055	0.82	+0.6
3,176,319	-		IAI47_15055	0.82	-0.0
3,176,319	-		IAI47_15055	0.82	-1.2
3,176,319	-		IAI47_15055	0.82	-0.1
3,176,354	+		IAI47_15055	0.84	+0.6
3,176,354	+		IAI47_15055	0.84	+2.5
3,176,354	+		IAI47_15055	0.84	+0.2
3,176,354	+		IAI47_15055	0.84	-0.9
3,176,354	+		IAI47_15055	0.84	+1.8
3,176,354	+		IAI47_15055	0.84	-0.1
3,176,354	+		IAI47_15055	0.84	-1.9
3,176,354	+		IAI47_15055	0.84	+1.3
3,176,354	+		IAI47_15055	0.84	+0.2
3,176,354	+		IAI47_15055	0.84	+0.3
3,176,354	+		IAI47_15055	0.84	+0.6
3,176,354	+		IAI47_15055	0.84	+0.9
3,176,355	-		IAI47_15055	0.84	-1.0
3,176,355	-		IAI47_15055	0.84	-0.2
3,176,369	+		IAI47_15055	0.85	+2.8
3,176,472	+				-0.5
3,176,472	+				-2.2
3,176,473	-				-0.4
3,176,473	-				+0.5
3,176,473	-				+0.6
3,176,473	-				-0.2
3,176,498	+				-0.4
3,176,575	+				-0.7
3,176,575	+				+0.6
3,176,576	-				-0.4
3,176,591	+				+1.9
3,176,591	+				+0.4
3,176,592	-				+0.5
3,176,592	-				+0.4
3,176,592	-				-1.0
3,176,594	+				-0.5
3,176,594	+				-2.2
3,176,594	+				+0.4
3,176,594	+				+1.7
3,176,594	+				+1.5
3,176,594	+				+0.5
3,176,594	+				-1.1
3,176,595	-				-1.6
3,176,595	-				-0.5
3,176,595	-				-0.9
3,176,595	-				+0.2
3,176,595	-				+0.2
3,176,595	-				+1.4
3,176,611	+				-2.0
3,176,612	-				-0.9
3,176,612	-				+0.7
3,176,612	-				+0.2
3,176,612	-				-0.2
3,176,648	+				-0.5
3,176,649	-				-0.5
3,176,649	-				+0.9
3,176,649	-				+2.4
3,176,649	-				-1.7
3,176,664	+		IAI47_15060	0.14	+0.5
3,176,664	+		IAI47_15060	0.14	+0.2
3,176,665	-		IAI47_15060	0.14	+1.8
3,176,669	+		IAI47_15060	0.15	-0.6
3,176,669	+		IAI47_15060	0.15	-1.0
3,176,670	-		IAI47_15060	0.15	-1.9
3,176,670	-		IAI47_15060	0.15	+0.9
3,176,682	+		IAI47_15060	0.18	+1.6
3,176,682	+		IAI47_15060	0.18	+1.1
3,176,682	+		IAI47_15060	0.18	-0.8
3,176,682	+		IAI47_15060	0.18	-0.0
3,176,683	-		IAI47_15060	0.19	-1.2
3,176,683	-		IAI47_15060	0.19	+0.1
3,176,683	-		IAI47_15060	0.19	-1.1
3,176,683	-		IAI47_15060	0.19	+1.4
3,176,683	-		IAI47_15060	0.19	+0.7
3,176,683	-		IAI47_15060	0.19	-0.2
3,176,701	+		IAI47_15060	0.23	-1.7
3,176,701	+		IAI47_15060	0.23	+1.4
3,176,702	-		IAI47_15060	0.23	-1.1
3,176,708	+		IAI47_15060	0.25	-0.7
3,176,709	-		IAI47_15060	0.25	-1.0
3,176,747	+		IAI47_15060	0.35	-1.0
3,176,748	-		IAI47_15060	0.35	+0.1
3,176,771	-		IAI47_15060	0.41	+0.7
3,176,771	-		IAI47_15060	0.41	+0.4
3,176,801	-		IAI47_15060	0.49	+0.0
3,176,801	-		IAI47_15060	0.49	-0.5
3,176,801	-		IAI47_15060	0.49	+2.0
3,176,818	+		IAI47_15060	0.53	+0.6
3,176,818	+		IAI47_15060	0.53	-0.3
3,176,852	+		IAI47_15060	0.62	-0.7
3,176,852	+		IAI47_15060	0.62	-0.3
3,176,852	+		IAI47_15060	0.62	+0.3
3,176,852	+		IAI47_15060	0.62	+0.4
3,176,852	+		IAI47_15060	0.62	+1.5
3,176,852	+		IAI47_15060	0.62	+0.0
3,176,852	+		IAI47_15060	0.62	+0.7
3,176,852	+		IAI47_15060	0.62	+0.3
3,176,852	+		IAI47_15060	0.62	+1.4
3,176,852	+		IAI47_15060	0.62	+0.0
3,176,853	-		IAI47_15060	0.62	+0.3
3,176,853	-		IAI47_15060	0.62	+1.0
3,176,853	-		IAI47_15060	0.62	+0.0
3,176,853	-		IAI47_15060	0.62	+0.4
3,176,853	-		IAI47_15060	0.62	+0.1
3,176,853	-		IAI47_15060	0.62	+0.7
3,176,853	-		IAI47_15060	0.62	+0.0
3,176,853	-		IAI47_15060	0.62	+0.1
3,176,853	-		IAI47_15060	0.62	+2.7
3,176,853	-		IAI47_15060	0.62	-0.8
3,176,853	-		IAI47_15060	0.62	-0.6
3,176,853	-		IAI47_15060	0.62	-1.6
3,176,853	-		IAI47_15060	0.62	-0.4
3,176,853	-		IAI47_15060	0.62	+0.5
3,176,853	-		IAI47_15060	0.62	+0.0
3,176,882	+		IAI47_15060	0.69	+0.2
3,176,883	-		IAI47_15060	0.69	-0.7
3,176,883	-		IAI47_15060	0.69	+0.9
3,176,884	+		IAI47_15060	0.70	+0.8
3,176,885	-		IAI47_15060	0.70	-0.9
3,176,885	-		IAI47_15060	0.70	+0.7
3,176,885	-		IAI47_15060	0.70	+1.6
3,176,932	+		IAI47_15060	0.82	+0.4
3,176,933	-		IAI47_15060	0.82	-0.0
3,176,933	-		IAI47_15060	0.82	+1.2
3,176,985	+				+1.7
3,177,015	+				-1.9
3,177,049	+				+1.1
3,177,063	+				+0.6
3,177,063	+				-1.3
3,177,064	-				-0.1
3,177,064	-				+1.3
3,177,064	-				+0.1
3,177,079	+				+1.2
3,177,137	+				+1.4
3,177,137	+				+2.7
3,177,137	+				-1.7
3,177,137	+				+1.7
3,177,137	+				+0.0
3,177,138	-				-0.3
3,177,154	+				-0.2
3,177,154	+				-0.5
3,177,175	+				+0.4
3,177,249	+				+0.0
3,177,250	-				+0.6
3,177,250	-				+2.1
3,177,250	-				-1.5
3,177,292	+		IAI47_15065	0.13	+1.5
3,177,292	+		IAI47_15065	0.13	-1.8
3,177,318	+		IAI47_15065	0.15	+1.8
3,177,370	+		IAI47_15065	0.21	-0.5
3,177,370	+		IAI47_15065	0.21	+0.7
3,177,380	-		IAI47_15065	0.22	-0.4
3,177,433	-		IAI47_15065	0.27	-0.6
3,177,448	+		IAI47_15065	0.29	+0.2
3,177,470	+		IAI47_15065	0.31	+0.4
3,177,470	+		IAI47_15065	0.31	+0.6
3,177,470	+		IAI47_15065	0.31	-1.8
3,177,470	+		IAI47_15065	0.31	+0.7
3,177,470	+		IAI47_15065	0.31	-1.5
3,177,471	-		IAI47_15065	0.31	-1.3
3,177,544	+		IAI47_15065	0.39	-2.0
3,177,545	-		IAI47_15065	0.39	-0.2
3,177,577	+		IAI47_15065	0.42	-1.4
3,177,577	+		IAI47_15065	0.42	+0.9
3,177,577	+		IAI47_15065	0.42	+1.8
3,177,577	+		IAI47_15065	0.42	+0.2
3,177,578	-		IAI47_15065	0.42	-0.4
3,177,653	+		IAI47_15065	0.50	-0.7
3,177,653	+		IAI47_15065	0.50	+0.1
3,177,653	+		IAI47_15065	0.50	+1.5
3,177,654	-		IAI47_15065	0.50	-0.6
3,177,716	+		IAI47_15065	0.57	-0.2
3,177,716	+		IAI47_15065	0.57	-0.6
3,177,717	-		IAI47_15065	0.57	+0.5
3,177,817	+		IAI47_15065	0.67	-1.6
3,177,855	+		IAI47_15065	0.71	+0.5
3,177,855	+		IAI47_15065	0.71	-0.2
3,177,855	+		IAI47_15065	0.71	+0.6
3,177,855	+		IAI47_15065	0.71	-0.5
3,177,855	+		IAI47_15065	0.71	+0.5
3,177,856	-		IAI47_15065	0.71	-0.1
3,177,909	+		IAI47_15065	0.77	-1.8
3,177,910	-		IAI47_15065	0.77	+1.5
3,177,910	-		IAI47_15065	0.77	+1.1
3,177,946	+		IAI47_15065	0.81	+0.5
3,177,947	-		IAI47_15065	0.81	-0.6
3,178,045	+				+0.5
3,178,045	+				+0.9
3,178,064	+				+0.9
3,178,064	+				+0.4
3,178,064	+				+3.1
3,178,064	+				+0.4
3,178,065	-				-0.2
3,178,065	-				+0.4
3,178,065	-				+2.5
3,178,065	-				-0.2
3,178,065	-				-1.9
3,178,065	-				-0.5
3,178,065	-				+3.7
3,178,131	-				+2.0
3,178,169	+				+2.1
3,178,169	+				-0.5
3,178,170	-				-0.5
3,178,213	+				-0.9
3,178,213	+				-0.2
3,178,213	+				+0.4
3,178,213	+				-0.3
3,178,213	+				-0.6
3,178,214	-				-1.5
3,178,230	+		IAI47_15070	0.11	+1.2
3,178,230	+		IAI47_15070	0.11	-0.3
3,178,231	-		IAI47_15070	0.11	+0.1
3,178,231	-		IAI47_15070	0.11	-0.1
3,178,231	-		IAI47_15070	0.11	-0.5
3,178,237	+		IAI47_15070	0.15	+0.9
3,178,237	+		IAI47_15070	0.15	+0.2
3,178,238	-		IAI47_15070	0.16	-0.3
3,178,238	-		IAI47_15070	0.16	+1.0
3,178,272	+		IAI47_15070	0.39	-1.5
3,178,273	-		IAI47_15070	0.39	-0.2
3,178,320	+		IAI47_15070	0.71	-1.5
3,178,321	-		IAI47_15070	0.71	+1.1
3,178,321	-		IAI47_15070	0.71	-1.0
3,178,338	+		IAI47_15070	0.83	-1.0
3,178,346	+		IAI47_15070	0.88	+0.1
3,178,347	-		IAI47_15070	0.89	-0.8
3,178,347	-		IAI47_15070	0.89	-0.5
3,178,354	-				-0.7
3,178,354	-				+1.2
3,178,476	+				+1.2
3,178,477	-				-0.3
3,178,477	-				+0.5
3,178,477	-				+0.3
3,178,480	+				+1.7
3,178,481	-				-1.4
3,178,497	+				+0.7
3,178,498	-				+1.4
3,178,512	-				-0.1
3,178,517	+				-0.8
3,178,517	+				-0.3
3,178,517	+				+1.0
3,178,517	+				-1.0
3,178,517	+				-0.1
3,178,517	+				-1.7
3,178,518	-				+0.2
3,178,518	-				-1.3
3,178,535	+				+0.2
3,178,541	+				-0.2
3,178,541	+				+2.9
3,178,541	+				+2.0
3,178,541	+				-2.4
3,178,542	-				+0.8
3,178,600	+				+1.5
3,178,600	+				-1.0
3,178,601	-				+1.5
3,178,601	-				+0.5
3,178,627	+				+0.1
3,178,630	+				-1.3
3,178,639	+				+1.2
3,178,639	+				-0.0
3,178,642	+				-2.0
3,178,642	+				-0.1
3,178,642	+				+0.3
3,178,642	+				-0.4
3,178,642	+				+1.0
3,178,643	-				-0.6
3,178,643	-				-0.5
3,178,648	-				-0.4
3,178,680	+				-0.5
3,178,680	+				-0.0
3,178,680	+				+0.3
3,178,681	-				+0.1
3,178,681	-				+0.6
3,178,681	-				-0.8
3,178,719	+				+1.0
3,178,719	+				+0.7
3,178,730	+				+0.4
3,178,730	+				+0.3
3,178,736	+				+0.2
3,178,736	+				+0.3
3,178,737	-				-1.8
3,178,737	-				-1.7
3,178,737	-				-1.3
3,178,755	+				+0.5
3,178,755	+				-1.4
3,178,755	+				-0.0
3,178,755	+				-0.1
3,178,755	+				+0.9
3,178,755	+				+1.0
3,178,755	+				-0.8
3,178,756	-				+1.2
3,178,756	-				+0.8
3,178,756	-				+0.9
3,178,756	-				+0.2
3,178,756	-				+0.8
3,178,756	-				+1.4
3,178,756	-				+1.7
3,178,758	+				-0.7
3,178,767	+				-0.6
3,178,767	+				-0.7
3,178,767	+				+0.5
3,178,767	+				-0.5
3,178,768	-				-1.2
3,178,768	-				-1.4
3,178,768	-				+0.3
3,178,768	-				-0.5
3,178,773	+				-0.5
3,178,773	+				+0.7
3,178,773	+				+0.2
3,178,773	+				+0.4
3,178,774	-				-1.5
3,178,774	-				-0.5
3,178,775	+				-1.3
3,178,779	+				+0.6
3,178,810	+				+0.6
3,178,810	+				-0.3
3,178,810	+				+0.2
3,178,811	-				-0.4
3,178,811	-				-0.5
3,178,811	-				-2.3
3,178,811	-				+0.8
3,178,820	+				+1.9
3,178,820	+				-1.6
3,178,821	-		IAI47_15075	0.10	+0.1
3,178,867	+		IAI47_15075	0.13	-1.1
3,178,868	-		IAI47_15075	0.13	-0.5
3,178,868	-		IAI47_15075	0.13	-1.3
3,178,950	+		IAI47_15075	0.18	-0.3
3,178,950	+		IAI47_15075	0.18	-0.5
3,178,950	+		IAI47_15075	0.18	-0.5
3,178,951	-		IAI47_15075	0.18	+0.2
3,178,951	-		IAI47_15075	0.18	-0.8
3,178,951	-		IAI47_15075	0.18	+1.5
3,178,951	-		IAI47_15075	0.18	-0.4
3,178,951	-		IAI47_15075	0.18	+0.0
3,179,002	-		IAI47_15075	0.21	+0.2
3,179,063	+		IAI47_15075	0.25	+0.1
3,179,063	+		IAI47_15075	0.25	-0.4
3,179,064	-		IAI47_15075	0.25	-0.3
3,179,068	-		IAI47_15075	0.26	-3.0
3,179,076	-		IAI47_15075	0.26	+0.4
3,179,076	-		IAI47_15075	0.26	+0.7
3,179,107	+		IAI47_15075	0.28	+0.5
3,179,107	+		IAI47_15075	0.28	-1.2
3,179,107	+		IAI47_15075	0.28	-0.7
3,179,107	+		IAI47_15075	0.28	-0.2
3,179,107	+		IAI47_15075	0.28	+0.5
3,179,107	+		IAI47_15075	0.28	-0.3
3,179,107	+		IAI47_15075	0.28	-0.8
3,179,107	+		IAI47_15075	0.28	+0.2
3,179,107	+		IAI47_15075	0.28	+0.9
3,179,107	+		IAI47_15075	0.28	+1.2
3,179,107	+		IAI47_15075	0.28	+0.1
3,179,107	+		IAI47_15075	0.28	-1.1
3,179,107	+		IAI47_15075	0.28	+0.1
3,179,107	+		IAI47_15075	0.28	-0.3
3,179,107	+		IAI47_15075	0.28	-1.0
3,179,107	+		IAI47_15075	0.28	+0.2
3,179,107	+		IAI47_15075	0.28	+2.0
3,179,107	+		IAI47_15075	0.28	+0.5
3,179,108	-		IAI47_15075	0.28	-0.5
3,179,108	-		IAI47_15075	0.28	+1.8
3,179,108	-		IAI47_15075	0.28	-1.5
3,179,108	-		IAI47_15075	0.28	-0.0
3,179,108	-		IAI47_15075	0.28	-1.2
3,179,108	-		IAI47_15075	0.28	+2.2
3,179,108	-		IAI47_15075	0.28	+0.5
3,179,108	-		IAI47_15075	0.28	-0.8
3,179,108	-		IAI47_15075	0.28	+0.6
3,179,108	-		IAI47_15075	0.28	-0.2
3,179,108	-		IAI47_15075	0.28	+1.3
3,179,108	-		IAI47_15075	0.28	+1.0
3,179,108	-		IAI47_15075	0.28	+1.2
3,179,108	-		IAI47_15075	0.28	+0.8