Strain Fitness in Pantoea sp. MT58 around IAI47_10360

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,193,549	+		IAI47_10355	0.40	+0.4
2,193,550	-		IAI47_10355	0.40	-0.8
2,193,550	-		IAI47_10355	0.40	-0.1
2,193,562	+		IAI47_10355	0.41	+0.6
2,193,563	-		IAI47_10355	0.41	-0.3
2,193,563	-		IAI47_10355	0.41	+0.7
2,193,563	-		IAI47_10355	0.41	-0.9
2,193,637	+		IAI47_10355	0.45	-2.0
2,193,637	+		IAI47_10355	0.45	+1.3
2,193,637	+		IAI47_10355	0.45	+1.3
2,193,637	+		IAI47_10355	0.45	-0.1
2,193,638	-		IAI47_10355	0.45	+1.3
2,193,638	-		IAI47_10355	0.45	+0.9
2,193,842	+		IAI47_10355	0.58	-0.3
2,193,842	+		IAI47_10355	0.58	+0.0
2,193,842	+		IAI47_10355	0.58	-1.7
2,193,842	+		IAI47_10355	0.58	-0.9
2,193,843	-		IAI47_10355	0.58	-2.2
2,193,843	-		IAI47_10355	0.58	+2.1
2,193,843	-		IAI47_10355	0.58	-0.3
2,193,877	+		IAI47_10355	0.60	-0.7
2,193,878	-		IAI47_10355	0.60	-0.1
2,193,878	-		IAI47_10355	0.60	-1.2
2,193,878	-		IAI47_10355	0.60	+0.3
2,193,888	+		IAI47_10355	0.61	+2.8
2,193,888	+		IAI47_10355	0.61	-0.6
2,193,888	+		IAI47_10355	0.61	-1.7
2,193,900	+		IAI47_10355	0.62	-0.5
2,193,971	+		IAI47_10355	0.66	-1.1
2,193,971	+		IAI47_10355	0.66	-1.2
2,193,971	+		IAI47_10355	0.66	-0.1
2,193,971	+		IAI47_10355	0.66	-0.3
2,193,972	-		IAI47_10355	0.66	+0.7
2,193,976	+		IAI47_10355	0.67	-0.0
2,194,020	+		IAI47_10355	0.69	-1.6
2,194,031	-		IAI47_10355	0.70	+0.8
2,194,033	+		IAI47_10355	0.70	+1.1
2,194,033	+		IAI47_10355	0.70	+0.1
2,194,042	+		IAI47_10355	0.71	-0.9
2,194,042	+		IAI47_10355	0.71	+0.8
2,194,054	+		IAI47_10355	0.71	-0.2
2,194,054	+		IAI47_10355	0.71	+1.9
2,194,055	-		IAI47_10355	0.72	-0.2
2,194,055	-		IAI47_10355	0.72	-0.2
2,194,055	-		IAI47_10355	0.72	+0.3
2,194,055	-		IAI47_10355	0.72	-0.1
2,194,080	+		IAI47_10355	0.73	-0.0
2,194,080	+		IAI47_10355	0.73	-0.2
2,194,081	-		IAI47_10355	0.73	+0.1
2,194,081	-		IAI47_10355	0.73	-0.8
2,194,081	-		IAI47_10355	0.73	-0.4
2,194,081	-		IAI47_10355	0.73	+1.1
2,194,081	-		IAI47_10355	0.73	+0.2
2,194,083	+		IAI47_10355	0.73	+1.3
2,194,083	+		IAI47_10355	0.73	+0.4
2,194,083	+		IAI47_10355	0.73	-0.6
2,194,083	+		IAI47_10355	0.73	+0.1
2,194,083	+		IAI47_10355	0.73	-1.6
2,194,084	-		IAI47_10355	0.73	-1.0
2,194,106	+		IAI47_10355	0.75	+1.0
2,194,106	+		IAI47_10355	0.75	+0.0
2,194,131	+		IAI47_10355	0.76	-0.7
2,194,145	+		IAI47_10355	0.77	+0.7
2,194,146	-		IAI47_10355	0.77	-0.4
2,194,146	-		IAI47_10355	0.77	+0.3
2,194,148	+		IAI47_10355	0.77	+1.1
2,194,148	+		IAI47_10355	0.77	-1.3
2,194,148	+		IAI47_10355	0.77	+0.7
2,194,149	-		IAI47_10355	0.77	+0.9
2,194,207	-		IAI47_10355	0.81	+1.3
2,194,214	-		IAI47_10355	0.82	-0.4
2,194,250	-		IAI47_10355	0.84	-0.9
2,194,255	+		IAI47_10355	0.84	-0.4
2,194,255	+		IAI47_10355	0.84	-1.5
2,194,255	+		IAI47_10355	0.84	+0.7
2,194,255	+		IAI47_10355	0.84	-0.0
2,194,255	+		IAI47_10355	0.84	-3.0
2,194,256	-		IAI47_10355	0.84	+0.7
2,194,256	-		IAI47_10355	0.84	-1.7
2,194,256	-		IAI47_10355	0.84	+0.1
2,194,266	-		IAI47_10355	0.85	+0.2
2,194,266	-		IAI47_10355	0.85	+1.5
2,194,268	-		IAI47_10355	0.85	-0.4
2,194,268	-		IAI47_10355	0.85	+0.6
2,194,268	-		IAI47_10355	0.85	-0.9
2,194,309	+		IAI47_10355	0.87	+0.3
2,194,309	+		IAI47_10355	0.87	+0.1
2,194,310	-		IAI47_10355	0.88	-0.8
2,194,310	-		IAI47_10355	0.88	-1.7
2,194,310	-		IAI47_10355	0.88	-0.3
2,194,312	+		IAI47_10355	0.88	-2.5
2,194,312	+		IAI47_10355	0.88	+0.4
2,194,312	+		IAI47_10355	0.88	+1.2
2,194,312	+		IAI47_10355	0.88	-0.1
2,194,312	+		IAI47_10355	0.88	+1.1
2,194,312	+		IAI47_10355	0.88	-0.3
2,194,313	-		IAI47_10355	0.88	-2.1
2,194,313	-		IAI47_10355	0.88	+0.4
2,194,313	-		IAI47_10355	0.88	-1.3
2,194,313	-		IAI47_10355	0.88	-1.3
2,194,313	-		IAI47_10355	0.88	-0.8
2,194,348	-		IAI47_10355	0.90	+0.3
2,194,360	+				+0.7
2,194,361	-				+0.5
2,194,366	+				+0.1
2,194,366	+				+0.2
2,194,366	+				-0.1
2,194,366	+				-0.1
2,194,367	-				-0.9
2,194,367	-				+0.9
2,194,367	-				+1.8
2,194,367	-				+0.7
2,194,367	-				+0.4
2,194,568	+				-0.8
2,194,569	-				+1.4
2,194,622	+				+0.8
2,194,705	-		IAI47_10360	0.15	-0.3
2,194,706	+		IAI47_10360	0.16	-2.3
2,194,706	+		IAI47_10360	0.16	-0.1
2,194,706	+		IAI47_10360	0.16	+0.6
2,194,706	+		IAI47_10360	0.16	+0.6
2,194,706	+		IAI47_10360	0.16	-0.6
2,194,707	-		IAI47_10360	0.16	-0.1
2,194,707	-		IAI47_10360	0.16	-0.4
2,194,707	-		IAI47_10360	0.16	+0.2
2,194,707	-		IAI47_10360	0.16	+0.1
2,194,771	-		IAI47_10360	0.21	-1.1
2,194,798	-		IAI47_10360	0.23	+1.2
2,194,815	+		IAI47_10360	0.25	-1.1
2,194,815	+		IAI47_10360	0.25	-0.2
2,194,815	+		IAI47_10360	0.25	-1.3
2,194,815	+		IAI47_10360	0.25	-0.7
2,194,815	+		IAI47_10360	0.25	+1.5
2,194,815	+		IAI47_10360	0.25	+0.5
2,194,815	+		IAI47_10360	0.25	-0.4
2,194,815	+		IAI47_10360	0.25	+0.4
2,194,816	-		IAI47_10360	0.25	+0.8
2,194,816	-		IAI47_10360	0.25	+0.7
2,194,816	-		IAI47_10360	0.25	+0.6
2,194,816	-		IAI47_10360	0.25	+0.9
2,194,816	-		IAI47_10360	0.25	+0.7
2,194,816	-		IAI47_10360	0.25	+0.2
2,194,816	-		IAI47_10360	0.25	-0.2
2,194,816	-		IAI47_10360	0.25	-1.0
2,194,816	-		IAI47_10360	0.25	+0.4
2,194,817	+		IAI47_10360	0.25	-2.1
2,194,818	-		IAI47_10360	0.25	-1.8
2,194,818	-		IAI47_10360	0.25	+1.0
2,194,818	-		IAI47_10360	0.25	-0.2
2,194,818	-		IAI47_10360	0.25	-1.1
2,194,818	-		IAI47_10360	0.25	-1.2
2,194,818	-		IAI47_10360	0.25	-0.7
2,194,818	-		IAI47_10360	0.25	-1.3
2,194,818	-		IAI47_10360	0.25	+0.7
2,194,867	+		IAI47_10360	0.29	-0.6
2,194,867	+		IAI47_10360	0.29	-1.7
2,194,867	+		IAI47_10360	0.29	+0.8
2,194,867	+		IAI47_10360	0.29	+0.3
2,194,867	+		IAI47_10360	0.29	-0.4
2,194,867	+		IAI47_10360	0.29	+2.7
2,194,867	+		IAI47_10360	0.29	+0.5
2,194,868	-		IAI47_10360	0.29	-0.7
2,194,874	+		IAI47_10360	0.30	-0.8
2,194,874	+		IAI47_10360	0.30	+0.4
2,194,875	-		IAI47_10360	0.30	+2.0
2,194,875	-		IAI47_10360	0.30	-0.5
2,194,875	-		IAI47_10360	0.30	-0.2
2,194,875	-		IAI47_10360	0.30	+1.5
2,194,875	-		IAI47_10360	0.30	-0.4
2,194,884	+		IAI47_10360	0.31	+0.9
2,194,884	+		IAI47_10360	0.31	+2.3
2,194,885	-		IAI47_10360	0.31	-0.9
2,194,896	+		IAI47_10360	0.32	-0.8
2,194,896	+		IAI47_10360	0.32	+1.4
2,194,896	+		IAI47_10360	0.32	-1.6
2,194,897	-		IAI47_10360	0.32	-1.4
2,194,897	-		IAI47_10360	0.32	+0.1
2,194,898	+		IAI47_10360	0.32	-1.6
2,194,899	-		IAI47_10360	0.32	+1.1
2,194,906	+		IAI47_10360	0.33	-0.2
2,194,973	+		IAI47_10360	0.38	-0.7
2,195,135	+		IAI47_10360	0.52	-0.2
2,195,136	-		IAI47_10360	0.52	-1.4
2,195,136	-		IAI47_10360	0.52	-1.7
2,195,141	+		IAI47_10360	0.53	-1.4
2,195,141	+		IAI47_10360	0.53	-1.2
2,195,142	-		IAI47_10360	0.53	-1.0
2,195,165	+		IAI47_10360	0.55	-0.4
2,195,165	+		IAI47_10360	0.55	-0.2
2,195,166	-		IAI47_10360	0.55	-0.5
2,195,166	-		IAI47_10360	0.55	-1.9
2,195,166	-		IAI47_10360	0.55	-1.1
2,195,207	+		IAI47_10360	0.58	-0.0
2,195,219	+		IAI47_10360	0.59	+0.4
2,195,219	+		IAI47_10360	0.59	-0.4
2,195,395	+		IAI47_10360	0.74	-0.3
2,195,395	+		IAI47_10360	0.74	+0.1
2,195,403	+		IAI47_10360	0.75	+0.5
2,195,403	+		IAI47_10360	0.75	-0.8
2,195,404	-		IAI47_10360	0.75	-0.9
2,195,404	-		IAI47_10360	0.75	+0.4
2,195,409	+		IAI47_10360	0.75	-2.1
2,195,462	+		IAI47_10360	0.80	+0.6
2,195,462	+		IAI47_10360	0.80	-0.8
2,195,462	+		IAI47_10360	0.80	-0.5
2,195,463	-		IAI47_10360	0.80	-0.7
2,195,463	-		IAI47_10360	0.80	-1.1
2,195,463	-		IAI47_10360	0.80	-1.1
2,195,487	+		IAI47_10360	0.82	-0.5
2,195,488	-		IAI47_10360	0.82	-1.0
2,195,504	+		IAI47_10360	0.84	-0.1
2,195,504	+		IAI47_10360	0.84	-0.7
2,195,505	-		IAI47_10360	0.84	+0.7
2,195,505	-		IAI47_10360	0.84	+0.6
2,195,505	-		IAI47_10360	0.84	-2.2
2,195,519	+		IAI47_10360	0.85	+2.0
2,195,570	+		IAI47_10360	0.89	-0.1
2,195,570	+		IAI47_10360	0.89	-1.1
2,195,586	+				+0.4
2,195,618	+				-0.0
2,195,619	-				+0.0
2,195,619	-				-0.1
2,195,619	-				+0.5
2,195,619	-				-0.9
2,195,636	+				-1.0
2,195,637	-				+0.6
2,195,637	-				+0.2
2,195,666	+				-1.6
2,195,666	+				-2.7
2,195,667	-				-1.4
2,195,677	+				-1.9
2,195,677	+				-0.4
2,195,678	-				-0.2
2,195,731	-				+0.7
2,195,737	-				+0.6
2,195,737	-				-0.1
2,195,737	-				-0.1
2,195,740	+				-0.7
2,195,740	+				-1.8
2,195,740	+				-1.0
2,195,740	+				-0.2
2,195,740	+				-1.9
2,195,740	+				-1.6
2,195,740	+				+0.5
2,195,740	+				-0.6
2,195,741	-				-0.4
2,195,741	-				+2.0
2,195,741	-				-1.4
2,195,741	-				-2.1
2,195,741	-				+1.1
2,195,741	-				-2.3
2,195,741	-				-0.3
2,195,741	-				+0.3
2,195,741	-				-1.8
2,195,771	+				-0.8
2,195,772	-				-0.9
2,195,772	-				+0.7
2,195,772	-				+0.5
2,195,772	-				+0.4
2,195,794	-				+0.7
2,195,794	-				+0.3
2,195,800	-				+3.9
2,195,801	+				-0.9
2,195,801	+				-1.5
2,195,801	+				+0.7
2,195,801	+				-3.0
2,195,802	-				+1.7
2,195,802	-				+1.0
2,195,802	-				+0.2
2,195,869	+				+1.2
2,195,919	+				-2.1
2,195,920	-				-1.2
2,195,933	-				+2.3
2,195,939	-				+0.9
2,196,119	+		IAI47_10365	0.28	-1.1
2,196,119	+		IAI47_10365	0.28	-0.4
2,196,120	-		IAI47_10365	0.28	-0.2
2,196,146	+		IAI47_10365	0.31	-0.6
2,196,147	-		IAI47_10365	0.31	+2.2
2,196,147	-		IAI47_10365	0.31	-0.1
2,196,147	-		IAI47_10365	0.31	-0.8
2,196,147	-		IAI47_10365	0.31	+0.3
2,196,148	+		IAI47_10365	0.31	-1.3
2,196,148	+		IAI47_10365	0.31	-0.9
2,196,148	+		IAI47_10365	0.31	+0.3
2,196,148	+		IAI47_10365	0.31	-1.4
2,196,148	+		IAI47_10365	0.31	-0.4
2,196,148	+		IAI47_10365	0.31	+1.1
2,196,148	+		IAI47_10365	0.31	-0.9
2,196,149	-		IAI47_10365	0.31	-0.6
2,196,149	-		IAI47_10365	0.31	-0.5
2,196,208	-		IAI47_10365	0.37	-0.5
2,196,253	+		IAI47_10365	0.41	+1.1
2,196,254	-		IAI47_10365	0.42	+0.9
2,196,254	-		IAI47_10365	0.42	-0.0
2,196,256	+		IAI47_10365	0.42	-1.0
2,196,256	+		IAI47_10365	0.42	-0.7
2,196,256	+		IAI47_10365	0.42	+0.6
2,196,256	+		IAI47_10365	0.42	+0.1
2,196,257	-		IAI47_10365	0.42	-0.3
2,196,257	-		IAI47_10365	0.42	+1.1
2,196,266	-		IAI47_10365	0.43	+0.2
2,196,266	-		IAI47_10365	0.43	-2.4
2,196,426	+		IAI47_10365	0.59	-0.2
2,196,426	+		IAI47_10365	0.59	+2.2
2,196,426	+		IAI47_10365	0.59	-0.9
2,196,426	+		IAI47_10365	0.59	-0.4
2,196,426	+		IAI47_10365	0.59	+1.3
2,196,427	-		IAI47_10365	0.59	-0.6
2,196,427	-		IAI47_10365	0.59	-1.1
2,196,427	-		IAI47_10365	0.59	-0.0
2,196,427	-		IAI47_10365	0.59	-0.0
2,196,427	-		IAI47_10365	0.59	+0.1
2,196,493	+		IAI47_10365	0.66	+3.3
2,196,493	+		IAI47_10365	0.66	+2.2
2,196,493	+		IAI47_10365	0.66	+0.7
2,196,494	-		IAI47_10365	0.66	-0.9
2,196,494	-		IAI47_10365	0.66	+0.6
2,196,494	-		IAI47_10365	0.66	-1.4
2,196,494	-		IAI47_10365	0.66	-0.5
2,196,494	-		IAI47_10365	0.66	+1.2
2,196,494	-		IAI47_10365	0.66	+0.5
2,196,494	-		IAI47_10365	0.66	-1.0
2,196,494	-		IAI47_10365	0.66	-3.0
2,196,494	-		IAI47_10365	0.66	+0.2
2,196,562	+		IAI47_10365	0.72	+0.9
2,196,587	-		IAI47_10365	0.75	+0.5