Strain Fitness in Pantoea sp. MT58 around IAI47_09580

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,025,127	+		IAI47_09575	0.13	+1.4
2,025,160	+		IAI47_09575	0.17	+1.1
2,025,217	-		IAI47_09575	0.23	+1.0
2,025,305	+		IAI47_09575	0.32	+2.0
2,025,305	+		IAI47_09575	0.32	+0.3
2,025,306	-		IAI47_09575	0.32	-0.5
2,025,342	+		IAI47_09575	0.36	-0.0
2,025,342	+		IAI47_09575	0.36	-1.3
2,025,342	+		IAI47_09575	0.36	+2.3
2,025,343	-		IAI47_09575	0.36	+1.9
2,025,343	-		IAI47_09575	0.36	+0.5
2,025,343	-		IAI47_09575	0.36	+0.2
2,025,343	-		IAI47_09575	0.36	+0.5
2,025,343	-		IAI47_09575	0.36	+0.3
2,025,362	+		IAI47_09575	0.38	+0.0
2,025,492	+		IAI47_09575	0.52	-2.1
2,025,493	-		IAI47_09575	0.52	-0.3
2,025,546	+		IAI47_09575	0.57	-0.5
2,025,546	+		IAI47_09575	0.57	+0.5
2,025,546	+		IAI47_09575	0.57	+1.7
2,025,546	+		IAI47_09575	0.57	-2.1
2,025,546	+		IAI47_09575	0.57	-0.8
2,025,547	-		IAI47_09575	0.57	-0.5
2,025,547	-		IAI47_09575	0.57	-2.9
2,025,547	-		IAI47_09575	0.57	+1.0
2,025,547	-		IAI47_09575	0.57	+3.3
2,025,693	+		IAI47_09575	0.73	+2.4
2,025,694	-		IAI47_09575	0.73	+0.6
2,025,719	+		IAI47_09575	0.75	-0.3
2,025,719	+		IAI47_09575	0.75	-0.0
2,025,720	-		IAI47_09575	0.75	-1.2
2,025,720	-		IAI47_09575	0.75	+2.1
2,025,751	-		IAI47_09575	0.79	+0.1
2,025,777	+		IAI47_09575	0.81	+0.1
2,025,818	+		IAI47_09575	0.86	+0.4
2,025,819	-		IAI47_09575	0.86	+2.7
2,025,830	+		IAI47_09575	0.87	+0.6
2,025,835	-		IAI47_09575	0.87	-1.8
2,025,835	-		IAI47_09575	0.87	-1.0
2,025,835	-		IAI47_09575	0.87	+1.7
2,025,835	-		IAI47_09575	0.87	-0.9
2,025,835	-		IAI47_09575	0.87	+2.7
2,025,849	+		IAI47_09575	0.89	-1.5
2,025,849	+		IAI47_09575	0.89	+1.0
2,025,849	+		IAI47_09575	0.89	-0.7
2,025,850	-		IAI47_09575	0.89	+0.2
2,025,850	-		IAI47_09575	0.89	+0.5
2,025,878	+				-0.0
2,025,878	+				-1.2
2,025,937	-				+0.9
2,025,937	-				+1.3
2,025,937	-				-1.2
2,025,993	+				-2.7
2,025,994	-				+0.3
2,025,994	-				+0.3
2,025,994	-				-0.5
2,025,994	-				-1.5
2,025,998	+				-1.7
2,025,998	+				+1.7
2,025,998	+				+0.3
2,025,998	+				+0.1
2,025,998	+				+0.7
2,025,998	+				-2.6
2,025,998	+				-2.0
2,025,999	-				-2.0
2,025,999	-				+1.1
2,025,999	-				-0.0
2,025,999	-				+0.5
2,025,999	-				+0.8
2,025,999	-				+0.9
2,025,999	-				+0.1
2,026,006	-				-1.6
2,026,006	-				+1.0
2,026,043	-				+0.2
2,026,100	-				-0.1
2,026,137	-				-2.4
2,026,137	-				-1.3
2,026,137	-				-2.5
2,026,137	-				-2.7
2,026,218	-		IAI47_09580	0.19	-1.6
2,026,222	-		IAI47_09580	0.20	-1.6
2,026,423	-		IAI47_09580	0.47	-1.5
2,026,588	-		IAI47_09580	0.69	-1.6
2,026,589	+		IAI47_09580	0.69	-2.2
2,026,590	-		IAI47_09580	0.69	-2.9
2,026,692	+		IAI47_09580	0.82	-2.2
2,026,692	+		IAI47_09580	0.82	-2.4
2,026,693	-		IAI47_09580	0.82	-2.3
2,026,693	-		IAI47_09580	0.82	-2.9
2,026,795	-				-1.0
2,026,801	+				-3.6
2,026,824	+				-1.1
2,026,824	+				-2.2
2,026,843	-				-1.8
2,026,843	-				-0.9
2,026,847	-				-2.3
2,026,847	-				-2.3
2,026,847	-				-1.6
2,026,847	-				-1.2
2,026,902	+				-0.6
2,026,918	-				-1.1
2,026,918	-				-0.5
2,026,918	-				+2.0
2,026,928	+				-1.4
2,026,974	-				+0.2
2,027,004	-				+0.5
2,027,004	-				+0.7
2,027,004	-				+1.5
2,027,065	-				-1.6
2,027,080	+				+1.9
2,027,080	+				+0.0
2,027,086	-				+1.0
2,027,086	-				-1.2
2,027,093	-				+0.5
2,027,155	+				-0.2
2,027,156	-				+2.8
2,027,156	-				-0.9
2,027,156	-				+0.5
2,027,274	+		IAI47_09585	0.23	+0.1
2,027,274	+		IAI47_09585	0.23	-1.9
2,027,275	-		IAI47_09585	0.24	+0.8
2,027,309	-		IAI47_09585	0.30	+0.6
2,027,309	-		IAI47_09585	0.30	-0.5
2,027,309	-		IAI47_09585	0.30	-0.7
2,027,317	+		IAI47_09585	0.31	-1.1
2,027,317	+		IAI47_09585	0.31	+0.3
2,027,317	+		IAI47_09585	0.31	-2.4
2,027,317	+		IAI47_09585	0.31	+1.5
2,027,318	-		IAI47_09585	0.31	+0.5
2,027,318	-		IAI47_09585	0.31	+0.8
2,027,318	-		IAI47_09585	0.31	-0.8
2,027,320	+		IAI47_09585	0.32	-0.7
2,027,320	+		IAI47_09585	0.32	-0.9
2,027,320	+		IAI47_09585	0.32	-0.9
2,027,320	+		IAI47_09585	0.32	-0.9
2,027,320	+		IAI47_09585	0.32	+0.0
2,027,320	+		IAI47_09585	0.32	-0.4
2,027,321	-		IAI47_09585	0.32	-0.9
2,027,333	+		IAI47_09585	0.34	+0.6
2,027,334	-		IAI47_09585	0.34	-0.7
2,027,335	+		IAI47_09585	0.34	+0.9
2,027,336	-		IAI47_09585	0.34	-1.0
2,027,360	-		IAI47_09585	0.39	+0.4
2,027,387	+		IAI47_09585	0.43	-0.7
2,027,387	+		IAI47_09585	0.43	-0.0
2,027,387	+		IAI47_09585	0.43	+0.3
2,027,387	+		IAI47_09585	0.43	-0.0
2,027,387	+		IAI47_09585	0.43	-0.7
2,027,388	-		IAI47_09585	0.44	-0.7
2,027,388	-		IAI47_09585	0.44	-0.9
2,027,388	-		IAI47_09585	0.44	-1.2
2,027,388	-		IAI47_09585	0.44	-0.1
2,027,388	-		IAI47_09585	0.44	-1.0
2,027,388	-		IAI47_09585	0.44	-0.8
2,027,388	-		IAI47_09585	0.44	-2.5
2,027,415	+		IAI47_09585	0.48	+0.3
2,027,416	-		IAI47_09585	0.49	-0.5
2,027,458	+		IAI47_09585	0.56	+1.3
2,027,458	+		IAI47_09585	0.56	+1.8
2,027,458	+		IAI47_09585	0.56	+3.0
2,027,459	-		IAI47_09585	0.56	-1.0
2,027,521	+		IAI47_09585	0.67	-0.1
2,027,521	+		IAI47_09585	0.67	+0.6
2,027,522	-		IAI47_09585	0.67	-1.7
2,027,539	+		IAI47_09585	0.70	-1.7
2,027,544	+		IAI47_09585	0.71	-0.8
2,027,544	+		IAI47_09585	0.71	+0.2
2,027,544	+		IAI47_09585	0.71	-0.3
2,027,544	+		IAI47_09585	0.71	+0.4
2,027,545	-		IAI47_09585	0.71	-0.0
2,027,545	-		IAI47_09585	0.71	-1.4
2,027,545	-		IAI47_09585	0.71	+1.6
2,027,552	+		IAI47_09585	0.72	+0.8
2,027,552	+		IAI47_09585	0.72	-0.2
2,027,552	+		IAI47_09585	0.72	+1.1
2,027,553	-		IAI47_09585	0.73	-1.5
2,027,553	-		IAI47_09585	0.73	-0.9
2,027,568	+		IAI47_09585	0.75	+1.8
2,027,569	-		IAI47_09585	0.75	+2.2
2,027,586	+		IAI47_09585	0.78	+1.1
2,027,586	+		IAI47_09585	0.78	-1.0
2,027,636	+		IAI47_09585	0.87	+0.7
2,027,637	-		IAI47_09585	0.87	+0.8
2,027,647	-		IAI47_09585	0.89	+1.0
2,027,705	+				-0.7
2,027,719	-				-0.0
2,027,727	+				-1.2
2,027,727	+				-2.2
2,027,728	-				-1.0
2,027,728	-				+0.3
2,027,775	+				-0.3
2,027,775	+				-0.7
2,027,776	-				-0.7
2,027,776	-				+0.6