Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_20900 and IAI47_20905 are separated by 105 nucleotides IAI47_20905 and IAI47_20910 are separated by 449 nucleotides
IAI47_20900: IAI47_20900 - maltoporin, at 425,715 to 426,977
_20900
IAI47_20905: IAI47_20905 - PTS transporter subunit EIIB, at 427,083 to 427,400
_20905
IAI47_20910: IAI47_20910 - beta-galactosidase, at 427,850 to 429,922
_20910
Position (kb) 427
428 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 426.114 kb on + strand, within IAI47_20900 at 426.115 kb on - strand, within IAI47_20900 at 426.117 kb on + strand, within IAI47_20900 at 426.117 kb on + strand, within IAI47_20900 at 426.117 kb on + strand, within IAI47_20900 at 426.117 kb on + strand, within IAI47_20900 at 426.118 kb on - strand, within IAI47_20900 at 426.118 kb on - strand, within IAI47_20900 at 426.118 kb on - strand, within IAI47_20900 at 426.118 kb on - strand, within IAI47_20900 at 426.146 kb on + strand, within IAI47_20900 at 426.153 kb on + strand, within IAI47_20900 at 426.153 kb on + strand, within IAI47_20900 at 426.154 kb on - strand, within IAI47_20900 at 426.161 kb on + strand, within IAI47_20900 at 426.192 kb on + strand, within IAI47_20900 at 426.193 kb on - strand, within IAI47_20900 at 426.287 kb on + strand, within IAI47_20900 at 426.287 kb on + strand, within IAI47_20900 at 426.287 kb on + strand, within IAI47_20900 at 426.287 kb on + strand, within IAI47_20900 at 426.287 kb on + strand, within IAI47_20900 at 426.287 kb on + strand, within IAI47_20900 at 426.288 kb on - strand, within IAI47_20900 at 426.288 kb on - strand, within IAI47_20900 at 426.288 kb on - strand, within IAI47_20900 at 426.288 kb on - strand, within IAI47_20900 at 426.288 kb on - strand, within IAI47_20900 at 426.288 kb on - strand, within IAI47_20900 at 426.288 kb on - strand, within IAI47_20900 at 426.291 kb on + strand, within IAI47_20900 at 426.291 kb on + strand, within IAI47_20900 at 426.292 kb on - strand, within IAI47_20900 at 426.292 kb on - strand, within IAI47_20900 at 426.292 kb on - strand, within IAI47_20900 at 426.306 kb on + strand, within IAI47_20900 at 426.357 kb on + strand, within IAI47_20900 at 426.358 kb on - strand, within IAI47_20900 at 426.358 kb on - strand, within IAI47_20900 at 426.393 kb on + strand, within IAI47_20900 at 426.393 kb on + strand, within IAI47_20900 at 426.394 kb on - strand, within IAI47_20900 at 426.394 kb on - strand, within IAI47_20900 at 426.405 kb on + strand, within IAI47_20900 at 426.406 kb on - strand, within IAI47_20900 at 426.406 kb on - strand, within IAI47_20900 at 426.425 kb on + strand, within IAI47_20900 at 426.426 kb on - strand, within IAI47_20900 at 426.452 kb on + strand, within IAI47_20900 at 426.453 kb on - strand, within IAI47_20900 at 426.453 kb on - strand, within IAI47_20900 at 426.453 kb on - strand, within IAI47_20900 at 426.453 kb on - strand, within IAI47_20900 at 426.453 kb on - strand, within IAI47_20900 at 426.453 kb on - strand, within IAI47_20900 at 426.453 kb on - strand, within IAI47_20900 at 426.453 kb on - strand, within IAI47_20900 at 426.453 kb on - strand, within IAI47_20900 at 426.465 kb on + strand, within IAI47_20900 at 426.537 kb on + strand, within IAI47_20900 at 426.538 kb on - strand, within IAI47_20900 at 426.538 kb on - strand, within IAI47_20900 at 426.538 kb on - strand, within IAI47_20900 at 426.555 kb on - strand, within IAI47_20900 at 426.587 kb on + strand, within IAI47_20900 at 426.656 kb on + strand, within IAI47_20900 at 426.656 kb on + strand, within IAI47_20900 at 426.657 kb on - strand, within IAI47_20900 at 426.657 kb on - strand, within IAI47_20900 at 426.680 kb on + strand, within IAI47_20900 at 426.712 kb on - strand, within IAI47_20900 at 426.726 kb on + strand, within IAI47_20900 at 426.726 kb on + strand, within IAI47_20900 at 426.726 kb on + strand, within IAI47_20900 at 426.726 kb on + strand, within IAI47_20900 at 426.726 kb on + strand, within IAI47_20900 at 426.726 kb on + strand, within IAI47_20900 at 426.726 kb on + strand, within IAI47_20900 at 426.726 kb on + strand, within IAI47_20900 at 426.726 kb on + strand, within IAI47_20900 at 426.727 kb on + strand, within IAI47_20900 at 426.727 kb on - strand, within IAI47_20900 at 426.727 kb on - strand, within IAI47_20900 at 426.727 kb on - strand, within IAI47_20900 at 426.727 kb on - strand, within IAI47_20900 at 426.727 kb on - strand, within IAI47_20900 at 426.727 kb on - strand, within IAI47_20900 at 426.776 kb on + strand, within IAI47_20900 at 426.776 kb on + strand, within IAI47_20900 at 426.777 kb on - strand, within IAI47_20900 at 426.792 kb on + strand, within IAI47_20900 at 426.793 kb on - strand, within IAI47_20900 at 426.794 kb on + strand, within IAI47_20900 at 426.794 kb on + strand, within IAI47_20900 at 426.795 kb on - strand, within IAI47_20900 at 426.813 kb on + strand, within IAI47_20900 at 426.813 kb on + strand, within IAI47_20900 at 426.813 kb on + strand, within IAI47_20900 at 426.814 kb on - strand, within IAI47_20900 at 426.814 kb on - strand, within IAI47_20900 at 426.815 kb on + strand, within IAI47_20900 at 426.816 kb on - strand, within IAI47_20900 at 426.851 kb on + strand at 426.851 kb on + strand at 426.851 kb on + strand at 426.852 kb on - strand at 426.852 kb on - strand at 426.852 kb on - strand at 426.868 kb on + strand at 426.868 kb on + strand at 426.868 kb on + strand at 426.868 kb on + strand at 426.868 kb on + strand at 426.868 kb on + strand at 426.868 kb on + strand at 426.869 kb on - strand at 426.869 kb on - strand at 426.885 kb on + strand at 426.885 kb on + strand at 426.886 kb on - strand at 426.933 kb on - strand at 426.955 kb on + strand at 426.956 kb on - strand at 427.007 kb on + strand at 427.008 kb on - strand at 427.015 kb on + strand at 427.015 kb on + strand at 427.015 kb on + strand at 427.015 kb on + strand at 427.015 kb on + strand at 427.016 kb on - strand at 427.016 kb on - strand at 427.016 kb on - strand at 427.027 kb on + strand at 427.027 kb on + strand at 427.027 kb on + strand at 427.027 kb on + strand at 427.028 kb on - strand at 427.028 kb on - strand at 427.028 kb on - strand at 427.068 kb on + strand at 427.085 kb on - strand at 427.097 kb on + strand at 427.142 kb on + strand, within IAI47_20905 at 427.158 kb on + strand, within IAI47_20905 at 427.159 kb on - strand, within IAI47_20905 at 427.159 kb on - strand, within IAI47_20905 at 427.159 kb on - strand, within IAI47_20905 at 427.159 kb on - strand, within IAI47_20905 at 427.203 kb on + strand, within IAI47_20905 at 427.204 kb on - strand, within IAI47_20905 at 427.236 kb on + strand, within IAI47_20905 at 427.237 kb on - strand, within IAI47_20905 at 427.281 kb on - strand, within IAI47_20905 at 427.281 kb on - strand, within IAI47_20905 at 427.320 kb on + strand, within IAI47_20905 at 427.321 kb on - strand, within IAI47_20905 at 427.373 kb on - strand at 427.418 kb on - strand at 427.421 kb on - strand at 427.458 kb on + strand at 427.458 kb on + strand at 427.499 kb on + strand at 427.499 kb on + strand at 427.500 kb on - strand at 427.500 kb on - strand at 427.500 kb on - strand at 427.501 kb on + strand at 427.501 kb on + strand at 427.501 kb on + strand at 427.501 kb on + strand at 427.501 kb on + strand at 427.502 kb on - strand at 427.502 kb on - strand at 427.502 kb on - strand at 427.502 kb on - strand at 427.518 kb on + strand at 427.518 kb on + strand at 427.519 kb on - strand at 427.519 kb on - strand at 427.519 kb on - strand at 427.519 kb on - strand at 427.519 kb on - strand at 427.519 kb on - strand at 427.519 kb on - strand at 427.519 kb on - strand at 427.519 kb on - strand at 427.526 kb on + strand at 427.526 kb on + strand at 427.527 kb on - strand at 427.552 kb on + strand at 427.552 kb on + strand at 427.555 kb on + strand at 427.556 kb on - strand at 427.556 kb on - strand at 427.563 kb on - strand at 427.575 kb on + strand at 427.575 kb on + strand at 427.576 kb on - strand at 427.576 kb on - strand at 427.576 kb on - strand at 427.576 kb on - strand at 427.576 kb on - strand at 427.578 kb on + strand at 427.578 kb on + strand at 427.579 kb on - strand at 427.579 kb on - strand at 427.579 kb on - strand at 427.621 kb on + strand at 427.649 kb on - strand at 427.720 kb on + strand at 427.720 kb on + strand at 427.721 kb on - strand at 427.723 kb on + strand at 427.724 kb on - strand at 427.724 kb on - strand at 427.724 kb on - strand at 427.851 kb on + strand at 427.851 kb on + strand at 427.854 kb on - strand at 427.870 kb on + strand at 427.870 kb on + strand at 427.871 kb on - strand at 427.987 kb on + strand at 428.092 kb on + strand, within IAI47_20910 at 428.092 kb on + strand, within IAI47_20910 at 428.092 kb on + strand, within IAI47_20910 at 428.092 kb on + strand, within IAI47_20910 at 428.092 kb on + strand, within IAI47_20910 at 428.093 kb on - strand, within IAI47_20910 at 428.135 kb on - strand, within IAI47_20910 at 428.146 kb on + strand, within IAI47_20910 at 428.146 kb on + strand, within IAI47_20910 at 428.146 kb on + strand, within IAI47_20910 at 428.146 kb on + strand, within IAI47_20910 at 428.146 kb on + strand, within IAI47_20910 at 428.146 kb on + strand, within IAI47_20910 at 428.146 kb on + strand, within IAI47_20910 at 428.146 kb on + strand, within IAI47_20910 at 428.147 kb on - strand, within IAI47_20910 at 428.147 kb on - strand, within IAI47_20910 at 428.147 kb on - strand, within IAI47_20910 at 428.147 kb on - strand, within IAI47_20910 at 428.147 kb on - strand, within IAI47_20910 at 428.148 kb on + strand, within IAI47_20910 at 428.148 kb on + strand, within IAI47_20910 at 428.148 kb on + strand, within IAI47_20910 at 428.148 kb on + strand, within IAI47_20910 at 428.148 kb on + strand, within IAI47_20910 at 428.148 kb on + strand, within IAI47_20910 at 428.149 kb on - strand, within IAI47_20910 at 428.149 kb on - strand, within IAI47_20910 at 428.149 kb on - strand, within IAI47_20910 at 428.158 kb on + strand, within IAI47_20910 at 428.173 kb on + strand, within IAI47_20910 at 428.173 kb on + strand, within IAI47_20910 at 428.174 kb on - strand, within IAI47_20910 at 428.174 kb on - strand, within IAI47_20910 at 428.202 kb on + strand, within IAI47_20910 at 428.251 kb on + strand, within IAI47_20910 at 428.251 kb on + strand, within IAI47_20910 at 428.251 kb on + strand, within IAI47_20910 at 428.251 kb on + strand at 428.251 kb on + strand, within IAI47_20910 at 428.251 kb on + strand, within IAI47_20910 at 428.251 kb on + strand, within IAI47_20910 at 428.251 kb on + strand, within IAI47_20910 at 428.252 kb on - strand, within IAI47_20910 at 428.252 kb on - strand, within IAI47_20910 at 428.252 kb on - strand, within IAI47_20910 at 428.252 kb on - strand, within IAI47_20910 at 428.252 kb on - strand, within IAI47_20910 at 428.252 kb on - strand, within IAI47_20910 at 428.252 kb on - strand, within IAI47_20910
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50 remove 426,114 + IAI47_20900 0.32 +2.0 426,115 - IAI47_20900 0.32 +2.0 426,117 + IAI47_20900 0.32 -1.2 426,117 + IAI47_20900 0.32 -0.9 426,117 + IAI47_20900 0.32 -1.0 426,117 + IAI47_20900 0.32 -0.9 426,118 - IAI47_20900 0.32 -1.8 426,118 - IAI47_20900 0.32 +0.2 426,118 - IAI47_20900 0.32 -0.9 426,118 - IAI47_20900 0.32 +0.1 426,146 + IAI47_20900 0.34 -0.1 426,153 + IAI47_20900 0.35 +0.3 426,153 + IAI47_20900 0.35 +0.4 426,154 - IAI47_20900 0.35 -0.7 426,161 + IAI47_20900 0.35 -0.2 426,192 + IAI47_20900 0.38 -0.7 426,193 - IAI47_20900 0.38 -0.3 426,287 + IAI47_20900 0.45 +0.8 426,287 + IAI47_20900 0.45 -0.9 426,287 + IAI47_20900 0.45 -0.5 426,287 + IAI47_20900 0.45 +1.4 426,287 + IAI47_20900 0.45 +1.6 426,287 + IAI47_20900 0.45 +1.4 426,288 - IAI47_20900 0.45 -0.7 426,288 - IAI47_20900 0.45 +0.7 426,288 - IAI47_20900 0.45 +0.9 426,288 - IAI47_20900 0.45 -0.8 426,288 - IAI47_20900 0.45 -1.1 426,288 - IAI47_20900 0.45 -0.9 426,288 - IAI47_20900 0.45 +1.2 426,291 + IAI47_20900 0.46 +0.3 426,291 + IAI47_20900 0.46 +0.4 426,292 - IAI47_20900 0.46 -0.5 426,292 - IAI47_20900 0.46 +1.6 426,292 - IAI47_20900 0.46 +3.4 426,306 + IAI47_20900 0.47 -0.6 426,357 + IAI47_20900 0.51 +1.1 426,358 - IAI47_20900 0.51 +1.5 426,358 - IAI47_20900 0.51 -0.8 426,393 + IAI47_20900 0.54 +0.6 426,393 + IAI47_20900 0.54 -0.3 426,394 - IAI47_20900 0.54 -0.2 426,394 - IAI47_20900 0.54 -1.4 426,405 + IAI47_20900 0.55 -0.7 426,406 - IAI47_20900 0.55 +0.2 426,406 - IAI47_20900 0.55 +1.0 426,425 + IAI47_20900 0.56 +0.1 426,426 - IAI47_20900 0.56 -0.3 426,452 + IAI47_20900 0.58 +0.7 426,453 - IAI47_20900 0.58 -1.2 426,453 - IAI47_20900 0.58 -0.3 426,453 - IAI47_20900 0.58 -0.4 426,453 - IAI47_20900 0.58 +0.8 426,453 - IAI47_20900 0.58 -0.2 426,453 - IAI47_20900 0.58 -1.8 426,453 - IAI47_20900 0.58 +0.2 426,453 - IAI47_20900 0.58 +0.4 426,453 - IAI47_20900 0.58 +1.0 426,465 + IAI47_20900 0.59 +0.7 426,537 + IAI47_20900 0.65 +0.6 426,538 - IAI47_20900 0.65 -0.7 426,538 - IAI47_20900 0.65 -0.0 426,538 - IAI47_20900 0.65 -1.5 426,555 - IAI47_20900 0.67 +0.2 426,587 + IAI47_20900 0.69 -0.1 426,656 + IAI47_20900 0.75 -0.7 426,656 + IAI47_20900 0.75 +0.9 426,657 - IAI47_20900 0.75 -1.3 426,657 - IAI47_20900 0.75 -0.8 426,680 + IAI47_20900 0.76 -1.2 426,712 - IAI47_20900 0.79 -1.0 426,726 + IAI47_20900 0.80 -0.8 426,726 + IAI47_20900 0.80 -0.2 426,726 + IAI47_20900 0.80 +3.1 426,726 + IAI47_20900 0.80 -1.6 426,726 + IAI47_20900 0.80 -0.8 426,726 + IAI47_20900 0.80 -0.2 426,726 + IAI47_20900 0.80 +1.5 426,726 + IAI47_20900 0.80 -0.0 426,726 + IAI47_20900 0.80 +1.4 426,727 + IAI47_20900 0.80 -0.3 426,727 - IAI47_20900 0.80 -2.4 426,727 - IAI47_20900 0.80 +0.5 426,727 - IAI47_20900 0.80 -0.8 426,727 - IAI47_20900 0.80 -1.0 426,727 - IAI47_20900 0.80 +0.4 426,727 - IAI47_20900 0.80 +1.1 426,776 + IAI47_20900 0.84 -0.3 426,776 + IAI47_20900 0.84 -0.8 426,777 - IAI47_20900 0.84 +0.8 426,792 + IAI47_20900 0.85 -0.3 426,793 - IAI47_20900 0.85 -0.3 426,794 + IAI47_20900 0.85 -1.5 426,794 + IAI47_20900 0.85 -1.7 426,795 - IAI47_20900 0.86 -0.0 426,813 + IAI47_20900 0.87 +1.7 426,813 + IAI47_20900 0.87 +0.7 426,813 + IAI47_20900 0.87 +0.3 426,814 - IAI47_20900 0.87 +0.2 426,814 - IAI47_20900 0.87 -0.7 426,815 + IAI47_20900 0.87 +0.6 426,816 - IAI47_20900 0.87 +0.3 426,851 + -1.2 426,851 + -0.6 426,851 + +1.4 426,852 - +0.7 426,852 - +0.2 426,852 - -0.2 426,868 + +0.3 426,868 + -0.8 426,868 + -0.3 426,868 + -0.6 426,868 + +0.3 426,868 + +0.3 426,868 + -0.2 426,869 - -1.6 426,869 - -0.9 426,885 + -0.2 426,885 + +0.9 426,886 - +1.1 426,933 - -2.5 426,955 + +0.5 426,956 - +0.6 427,007 + -0.0 427,008 - +1.7 427,015 + -0.1 427,015 + +0.1 427,015 + -0.8 427,015 + -0.8 427,015 + -2.3 427,016 - -2.1 427,016 - +0.8 427,016 - -0.1 427,027 + +0.5 427,027 + -0.1 427,027 + +0.3 427,027 + -0.8 427,028 - +1.0 427,028 - +0.9 427,028 - +1.0 427,068 + -0.3 427,085 - -1.2 427,097 + -0.5 427,142 + IAI47_20905 0.19 -0.1 427,158 + IAI47_20905 0.24 -0.2 427,159 - IAI47_20905 0.24 +1.3 427,159 - IAI47_20905 0.24 -0.5 427,159 - IAI47_20905 0.24 -1.3 427,159 - IAI47_20905 0.24 -0.0 427,203 + IAI47_20905 0.38 +1.1 427,204 - IAI47_20905 0.38 -0.8 427,236 + IAI47_20905 0.48 +0.1 427,237 - IAI47_20905 0.48 +1.7 427,281 - IAI47_20905 0.62 -0.3 427,281 - IAI47_20905 0.62 +1.0 427,320 + IAI47_20905 0.75 -0.1 427,321 - IAI47_20905 0.75 +1.1 427,373 - +0.4 427,418 - -0.8 427,421 - +1.5 427,458 + -2.9 427,458 + +0.4 427,499 + -0.4 427,499 + +0.5 427,500 - +1.4 427,500 - -0.6 427,500 - +0.5 427,501 + +0.8 427,501 + -0.5 427,501 + +0.2 427,501 + -0.5 427,501 + -1.1 427,502 - -0.5 427,502 - -0.2 427,502 - +1.4 427,502 - +0.2 427,518 + +0.8 427,518 + -0.3 427,519 - +1.0 427,519 - +1.2 427,519 - +0.4 427,519 - -0.5 427,519 - +0.7 427,519 - -1.6 427,519 - -0.8 427,519 - +0.1 427,519 - +3.2 427,526 + +2.4 427,526 + -0.3 427,527 - +1.1 427,552 + -0.4 427,552 + -1.9 427,555 + +0.4 427,556 - -0.6 427,556 - -1.9 427,563 - -0.3 427,575 + +0.1 427,575 + +0.4 427,576 - -0.6 427,576 - -1.0 427,576 - +0.2 427,576 - +1.2 427,576 - -0.2 427,578 + -1.3 427,578 + -0.8 427,579 - +0.1 427,579 - +0.2 427,579 - -0.2 427,621 + -0.9 427,649 - +0.2 427,720 + +0.7 427,720 + -1.3 427,721 - -0.1 427,723 + +0.2 427,724 - -1.3 427,724 - -0.7 427,724 - -1.5 427,851 + +0.3 427,851 + -0.2 427,854 - -0.3 427,870 + -1.2 427,870 + +0.2 427,871 - -0.5 427,987 + +1.7 428,092 + IAI47_20910 0.12 -0.5 428,092 + IAI47_20910 0.12 -0.1 428,092 + IAI47_20910 0.12 +1.1 428,092 + IAI47_20910 0.12 -1.7 428,092 + IAI47_20910 0.12 -0.3 428,093 - IAI47_20910 0.12 -0.7 428,135 - IAI47_20910 0.14 -1.8 428,146 + IAI47_20910 0.14 +0.2 428,146 + IAI47_20910 0.14 -0.7 428,146 + IAI47_20910 0.14 -1.1 428,146 + IAI47_20910 0.14 +0.4 428,146 + IAI47_20910 0.14 +1.2 428,146 + IAI47_20910 0.14 -1.1 428,146 + IAI47_20910 0.14 -1.6 428,146 + IAI47_20910 0.14 +0.2 428,147 - IAI47_20910 0.14 -0.5 428,147 - IAI47_20910 0.14 -2.0 428,147 - IAI47_20910 0.14 +1.2 428,147 - IAI47_20910 0.14 +0.7 428,147 - IAI47_20910 0.14 +0.2 428,148 + IAI47_20910 0.14 -0.3 428,148 + IAI47_20910 0.14 +0.7 428,148 + IAI47_20910 0.14 -0.4 428,148 + IAI47_20910 0.14 -0.7 428,148 + IAI47_20910 0.14 +0.1 428,148 + IAI47_20910 0.14 +0.3 428,149 - IAI47_20910 0.14 +1.2 428,149 - IAI47_20910 0.14 -0.1 428,149 - IAI47_20910 0.14 +0.7 428,158 + IAI47_20910 0.15 -0.6 428,173 + IAI47_20910 0.16 +0.4 428,173 + IAI47_20910 0.16 -1.1 428,174 - IAI47_20910 0.16 -1.9 428,174 - IAI47_20910 0.16 +0.4 428,202 + IAI47_20910 0.17 +1.8 428,251 + IAI47_20910 0.19 -1.6 428,251 + IAI47_20910 0.19 +0.4 428,251 + IAI47_20910 0.19 -0.8 428,251 + -0.6 428,251 + IAI47_20910 0.19 +0.8 428,251 + IAI47_20910 0.19 -1.5 428,251 + IAI47_20910 0.19 -0.1 428,251 + IAI47_20910 0.19 -1.0 428,252 - IAI47_20910 0.19 +0.1 428,252 - IAI47_20910 0.19 -0.5 428,252 - IAI47_20910 0.19 -0.9 428,252 - IAI47_20910 0.19 -0.0 428,252 - IAI47_20910 0.19 -1.2 428,252 - IAI47_20910 0.19 -1.1 428,252 - IAI47_20910 0.19 -0.8
Or see this region's nucleotide sequence