Strain Fitness in Pantoea sp. MT58 around IAI47_18580

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,954,617	+				-1.0
3,954,668	-				-0.2
3,954,668	-				+0.6
3,954,668	-				-0.8
3,954,668	-				+1.0
3,954,672	+				+0.1
3,954,691	+				-0.3
3,954,691	+				+0.5
3,954,691	+				+0.5
3,954,691	+				+0.3
3,954,691	+				-1.2
3,954,691	+				+0.9
3,954,692	-				-2.2
3,954,692	-				+1.4
3,954,692	-				-2.0
3,954,692	-				+0.3
3,954,692	-				+1.7
3,954,692	-				+0.2
3,954,692	-				-0.8
3,954,695	+				-1.6
3,954,695	+				-0.0
3,954,695	+				+0.6
3,954,695	+				+0.9
3,954,695	+				-1.2
3,954,695	+				+0.3
3,954,695	+				-2.2
3,954,696	+				+1.1
3,954,696	-				+0.4
3,954,696	-				+0.6
3,954,696	-				-1.2
3,954,696	-				-0.3
3,954,696	-				+0.9
3,954,696	-				+1.8
3,954,696	-				+0.8
3,954,696	-				-0.3
3,954,696	-				+0.1
3,954,710	+				-0.6
3,954,711	-				-3.3
3,954,711	-				+0.8
3,954,713	+				+0.3
3,954,713	+				+0.1
3,954,713	+				-0.5
3,954,714	-				+0.7
3,954,714	-				+0.2
3,954,716	+				+0.5
3,954,716	+				+2.2
3,954,717	-				+1.5
3,954,792	+		IAI47_18575	0.11	+1.1
3,954,792	+		IAI47_18575	0.11	+0.9
3,954,792	+		IAI47_18575	0.11	+2.6
3,954,792	+		IAI47_18575	0.11	-0.5
3,954,792	+		IAI47_18575	0.11	-0.6
3,954,792	+		IAI47_18575	0.11	+0.4
3,954,793	-		IAI47_18575	0.11	+0.7
3,954,793	-		IAI47_18575	0.11	+1.5
3,954,793	-		IAI47_18575	0.11	-1.7
3,954,801	+		IAI47_18575	0.12	-1.5
3,954,802	-		IAI47_18575	0.12	-0.7
3,954,802	-		IAI47_18575	0.12	-0.1
3,954,802	-		IAI47_18575	0.12	-0.8
3,954,802	-		IAI47_18575	0.12	-0.9
3,954,802	-		IAI47_18575	0.12	-0.5
3,954,823	+		IAI47_18575	0.15	-0.9
3,954,823	+		IAI47_18575	0.15	+0.1
3,954,823	+		IAI47_18575	0.15	+0.2
3,954,823	+		IAI47_18575	0.15	-0.1
3,954,824	-		IAI47_18575	0.15	+0.2
3,954,824	-		IAI47_18575	0.15	-1.9
3,954,824	-		IAI47_18575	0.15	+0.6
3,954,873	-		IAI47_18575	0.20	+1.8
3,954,873	-		IAI47_18575	0.20	+0.1
3,954,901	-		IAI47_18575	0.23	-1.9
3,954,950	+		IAI47_18575	0.29	-1.0
3,954,950	+		IAI47_18575	0.29	-0.3
3,954,950	+		IAI47_18575	0.29	-0.9
3,954,950	+		IAI47_18575	0.29	-0.4
3,954,950	+		IAI47_18575	0.29	-0.2
3,954,950	+		IAI47_18575	0.29	-0.5
3,954,950	+		IAI47_18575	0.29	+0.2
3,954,950	+		IAI47_18575	0.29	-0.1
3,954,951	-		IAI47_18575	0.29	-1.0
3,954,951	-		IAI47_18575	0.29	+0.5
3,954,951	-		IAI47_18575	0.29	-0.7
3,954,951	-		IAI47_18575	0.29	+0.6
3,954,963	+		IAI47_18575	0.31	+0.4
3,954,963	+		IAI47_18575	0.31	-0.1
3,954,963	+		IAI47_18575	0.31	-0.4
3,954,964	-		IAI47_18575	0.31	+0.5
3,954,964	-		IAI47_18575	0.31	-0.3
3,954,964	-		IAI47_18575	0.31	-0.4
3,954,964	-		IAI47_18575	0.31	-0.2
3,954,984	+		IAI47_18575	0.33	+1.1
3,954,985	-		IAI47_18575	0.33	-0.3
3,954,985	-		IAI47_18575	0.33	+0.1
3,954,996	+		IAI47_18575	0.34	-1.3
3,954,997	-		IAI47_18575	0.34	+0.0
3,954,997	-		IAI47_18575	0.34	-1.6
3,955,092	-		IAI47_18575	0.45	+1.3
3,955,092	-		IAI47_18575	0.45	-1.5
3,955,095	+		IAI47_18575	0.46	-1.2
3,955,095	+		IAI47_18575	0.46	+0.4
3,955,095	+		IAI47_18575	0.46	-0.3
3,955,095	+		IAI47_18575	0.46	+0.5
3,955,095	+		IAI47_18575	0.46	+2.6
3,955,095	+		IAI47_18575	0.46	+0.2
3,955,096	-		IAI47_18575	0.46	-2.0
3,955,096	-		IAI47_18575	0.46	-0.1
3,955,096	-		IAI47_18575	0.46	-0.2
3,955,096	-		IAI47_18575	0.46	-0.7
3,955,323	+		IAI47_18575	0.72	+1.4
3,955,323	+		IAI47_18575	0.72	-1.5
3,955,324	-		IAI47_18575	0.72	-0.1
3,955,324	-		IAI47_18575	0.72	+1.1
3,955,442	+		IAI47_18575	0.85	-0.3
3,955,442	+		IAI47_18575	0.85	+0.3
3,955,442	+		IAI47_18575	0.85	+0.6
3,955,442	+		IAI47_18575	0.85	+0.3
3,955,442	+		IAI47_18575	0.85	-2.2
3,955,442	+		IAI47_18575	0.85	-0.9
3,955,443	-		IAI47_18575	0.86	+0.3
3,955,443	-		IAI47_18575	0.86	+0.0
3,955,443	-		IAI47_18575	0.86	+3.5
3,955,443	-		IAI47_18575	0.86	+0.4
3,955,443	-		IAI47_18575	0.86	-0.0
3,955,443	-		IAI47_18575	0.86	-0.6
3,955,443	-		IAI47_18575	0.86	+0.3
3,955,443	-		IAI47_18575	0.86	-0.1
3,955,466	-		IAI47_18575	0.88	+0.8
3,955,467	+		IAI47_18575	0.88	-0.1
3,955,537	+				-1.2
3,955,537	+				-0.3
3,955,537	+				-1.5
3,955,537	+				-0.2
3,955,537	+				-0.0
3,955,538	-				+0.5
3,955,538	-				+0.2
3,955,538	-				+0.8
3,955,573	-				+1.1
3,955,573	-				-2.4
3,955,573	-				+1.3
3,955,603	+				-1.9
3,955,655	+				+0.2
3,955,655	+				-1.1
3,955,655	+				+0.8
3,955,655	+				+0.1
3,955,655	+				+0.3
3,955,655	+				-2.4
3,955,655	+				-2.2
3,955,655	+				+0.9
3,955,655	+				+0.4
3,955,655	+				+0.7
3,955,655	+				-0.9
3,955,655	+				+1.4
3,955,656	-				+1.1
3,955,656	-				-0.4
3,955,656	-				-0.9
3,955,656	-				-1.0
3,955,656	-				+0.1
3,955,656	-				+0.1
3,955,656	-				+0.1
3,955,656	-				-0.4
3,955,690	+				+0.7
3,955,691	-				+0.2
3,955,815	+		IAI47_18580	0.16	-0.0
3,955,815	+		IAI47_18580	0.16	-0.9
3,955,815	+		IAI47_18580	0.16	-2.2
3,955,816	-		IAI47_18580	0.16	+0.6
3,955,885	+		IAI47_18580	0.21	-1.2
3,955,886	-		IAI47_18580	0.21	+0.2
3,955,899	+		IAI47_18580	0.22	-1.2
3,955,899	+		IAI47_18580	0.22	-1.7
3,955,900	-		IAI47_18580	0.22	-1.4
3,955,900	-		IAI47_18580	0.22	-0.3
3,955,900	-		IAI47_18580	0.22	-0.5
3,955,900	-		IAI47_18580	0.22	+0.4
3,955,900	-		IAI47_18580	0.22	-1.3
3,955,900	-		IAI47_18580	0.22	-0.6
3,955,900	-		IAI47_18580	0.22	-1.9
3,955,906	+		IAI47_18580	0.22	-0.6
3,955,907	-		IAI47_18580	0.23	+1.8
3,955,907	-		IAI47_18580	0.23	-0.3
3,955,915	+		IAI47_18580	0.23	-1.4
3,955,915	+		IAI47_18580	0.23	-1.0
3,955,915	+		IAI47_18580	0.23	-1.0
3,955,916	-		IAI47_18580	0.23	-0.4
3,955,916	-		IAI47_18580	0.23	-0.5
3,955,976	-		IAI47_18580	0.27	-1.2
3,955,976	-		IAI47_18580	0.27	-0.1
3,956,014	+		IAI47_18580	0.30	+1.6
3,956,015	-		IAI47_18580	0.30	-0.3
3,956,015	-		IAI47_18580	0.30	-0.7
3,956,015	-		IAI47_18580	0.30	-1.8
3,956,015	-		IAI47_18580	0.30	+0.8
3,956,073	+		IAI47_18580	0.34	-0.4
3,956,073	+		IAI47_18580	0.34	-1.5
3,956,074	-		IAI47_18580	0.34	-0.3
3,956,074	-		IAI47_18580	0.34	-1.3
3,956,225	-		IAI47_18580	0.44	-0.8
3,956,383	+		IAI47_18580	0.54	-2.2
3,956,403	+		IAI47_18580	0.56	-0.6
3,956,404	-		IAI47_18580	0.56	+0.3
3,956,427	+		IAI47_18580	0.57	-1.1
3,956,427	+		IAI47_18580	0.57	-1.0
3,956,427	+		IAI47_18580	0.57	-2.0
3,956,427	+		IAI47_18580	0.57	-0.7
3,956,428	-		IAI47_18580	0.57	+0.8
3,956,428	-		IAI47_18580	0.57	-0.3
3,956,440	-		IAI47_18580	0.58	-0.0
3,956,440	-		IAI47_18580	0.58	-0.4
3,956,459	+		IAI47_18580	0.60	-0.1
3,956,615	-		IAI47_18580	0.70	-1.1
3,956,615	-		IAI47_18580	0.70	-0.9
3,956,615	-		IAI47_18580	0.70	-1.5
3,956,620	+		IAI47_18580	0.70	-2.0
3,956,620	+		IAI47_18580	0.70	-0.2
3,956,620	+		IAI47_18580	0.70	-1.3
3,956,621	-		IAI47_18580	0.70	+0.3
3,956,621	-		IAI47_18580	0.70	-1.7
3,956,621	-		IAI47_18580	0.70	-1.4
3,956,695	+		IAI47_18580	0.75	+0.9
3,956,695	+		IAI47_18580	0.75	-0.6
3,956,695	+		IAI47_18580	0.75	-2.8
3,956,696	-		IAI47_18580	0.75	-0.7
3,956,696	-		IAI47_18580	0.75	-2.3
3,956,696	-		IAI47_18580	0.75	-0.7
3,956,696	-		IAI47_18580	0.75	-0.6
3,956,696	-		IAI47_18580	0.75	-1.2
3,956,696	-		IAI47_18580	0.75	-0.2
3,956,696	-		IAI47_18580	0.75	-1.9
3,956,696	-		IAI47_18580	0.75	-1.3
3,956,697	+		IAI47_18580	0.76	-0.7
3,956,697	+		IAI47_18580	0.76	-2.8
3,956,697	+		IAI47_18580	0.76	-1.9
3,956,698	-		IAI47_18580	0.76	-0.7
3,956,698	-		IAI47_18580	0.76	-0.9
3,956,698	-		IAI47_18580	0.76	-1.0
3,956,698	-		IAI47_18580	0.76	-0.7
3,956,698	-		IAI47_18580	0.76	-1.5
3,956,698	-		IAI47_18580	0.76	+0.3
3,956,712	+		IAI47_18580	0.77	+0.2
3,956,712	+		IAI47_18580	0.77	+0.4
3,956,712	+		IAI47_18580	0.77	-0.4
3,956,712	+		IAI47_18580	0.77	-1.9
3,956,712	+		IAI47_18580	0.77	-0.6
3,956,712	+		IAI47_18580	0.77	-0.9
3,956,713	-		IAI47_18580	0.77	-0.2
3,956,713	-		IAI47_18580	0.77	-1.3
3,956,713	-		IAI47_18580	0.77	-1.9
3,956,713	-		IAI47_18580	0.77	-1.8
3,956,713	-		IAI47_18580	0.77	+0.9
3,956,719	+		IAI47_18580	0.77	-0.2
3,956,719	+		IAI47_18580	0.77	-1.5
3,956,719	+		IAI47_18580	0.77	-0.8
3,956,720	-		IAI47_18580	0.77	-0.4
3,956,720	-		IAI47_18580	0.77	+0.0
3,956,720	-		IAI47_18580	0.77	-0.9
3,956,785	+		IAI47_18580	0.81	-1.8
3,956,785	+		IAI47_18580	0.81	-0.8
3,956,786	-		IAI47_18580	0.81	-1.8
3,956,786	-		IAI47_18580	0.81	-2.1
3,956,800	+		IAI47_18580	0.82	-0.4
3,956,800	+		IAI47_18580	0.82	-1.2
3,956,800	+		IAI47_18580	0.82	-1.2
3,956,800	+		IAI47_18580	0.82	-2.5
3,956,800	+		IAI47_18580	0.82	-1.4
3,956,800	+		IAI47_18580	0.82	-0.2
3,956,801	-		IAI47_18580	0.82	-1.3
3,956,801	-		IAI47_18580	0.82	-1.0
3,956,801	-		IAI47_18580	0.82	-1.8
3,956,801	-		IAI47_18580	0.82	-0.4
3,956,801	-		IAI47_18580	0.82	-0.8
3,956,801	-		IAI47_18580	0.82	-0.4
3,956,858	+		IAI47_18580	0.86	-1.0
3,956,858	+		IAI47_18580	0.86	+0.7
3,956,858	+		IAI47_18580	0.86	-1.9
3,956,858	+		IAI47_18580	0.86	-1.0
3,956,858	+		IAI47_18580	0.86	+0.1
3,956,859	-		IAI47_18580	0.86	-1.2
3,956,873	-		IAI47_18580	0.87	-0.7
3,956,927	+				-2.4
3,956,927	+				-0.9
3,956,938	+				-1.0
3,957,023	+				-0.8
3,957,024	-				-0.1
3,957,024	-				-0.9
3,957,024	-				-2.3
3,957,024	-				-1.7
3,957,079	+				-0.2
3,957,080	-				-0.2
3,957,088	+				-0.2
3,957,088	+				-0.3
3,957,088	+				-2.5
3,957,088	+				-0.2
3,957,089	-				+0.3
3,957,089	-				-2.6
3,957,089	-				+1.2
3,957,089	-				+0.1
3,957,094	+				-0.7
3,957,094	+				-1.0
3,957,094	+				-1.5
3,957,095	-				+0.8
3,957,107	+				-1.2
3,957,107	+				-0.5
3,957,107	+				+0.1
3,957,108	-				-1.5
3,957,119	+				-1.3
3,957,120	-				-0.3
3,957,120	-				-0.2
3,957,120	-				+1.6
3,957,122	+				+0.7
3,957,123	-				-1.0
3,957,237	+				-1.4
3,957,237	+				-0.5
3,957,237	+				+0.0
3,957,238	-				-0.3
3,957,238	-				-0.7
3,957,238	-				-0.3
3,957,238	-				-0.8
3,957,240	+				-0.1
3,957,241	-				-0.6
3,957,243	-				+1.0
3,957,291	+				+2.1
3,957,292	-				+0.4
3,957,331	+				+0.4
3,957,332	-				-0.5
3,957,332	-				-0.9
3,957,332	-				-1.2
3,957,341	-				+0.1
3,957,341	-				-0.8
3,957,359	-				-0.4
3,957,373	+				-2.7
3,957,373	+				+0.1
3,957,373	+				+1.0
3,957,417	-				-1.8
3,957,417	-				+1.3
3,957,460	+		IAI47_18585	0.12	+0.3
3,957,460	+		IAI47_18585	0.12	-0.8
3,957,461	-		IAI47_18585	0.12	-1.0
3,957,461	-		IAI47_18585	0.12	+0.8
3,957,461	-		IAI47_18585	0.12	+0.1
3,957,461	-		IAI47_18585	0.12	+0.1
3,957,605	-		IAI47_18585	0.23	-0.5
3,957,605	-		IAI47_18585	0.23	-1.0
3,957,619	+		IAI47_18585	0.24	+0.4
3,957,619	+		IAI47_18585	0.24	-0.2
3,957,619	+		IAI47_18585	0.24	-0.9
3,957,619	+		IAI47_18585	0.24	-0.5
3,957,619	+		IAI47_18585	0.24	-0.1
3,957,619	+		IAI47_18585	0.24	-1.4
3,957,619	+		IAI47_18585	0.24	+0.1
3,957,619	+		IAI47_18585	0.24	+1.0
3,957,620	-		IAI47_18585	0.24	-0.1
3,957,620	-		IAI47_18585	0.24	-2.1
3,957,620	-		IAI47_18585	0.24	-1.2
3,957,620	-		IAI47_18585	0.24	+1.2
3,957,620	-		IAI47_18585	0.24	+1.2
3,957,620	-		IAI47_18585	0.24	+0.6
3,957,649	+		IAI47_18585	0.26	+0.5
3,957,649	+		IAI47_18585	0.26	+0.5
3,957,649	+		IAI47_18585	0.26	+0.3
3,957,650	-		IAI47_18585	0.27	+0.6
3,957,650	-		IAI47_18585	0.27	-1.3
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