Strain Fitness in Pantoea sp. MT58 around IAI47_14600

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,078,417	+		IAI47_14595	0.45	+0.2
3,078,417	+		IAI47_14595	0.45	-1.6
3,078,417	+		IAI47_14595	0.45	+0.3
3,078,417	+		IAI47_14595	0.45	-2.1
3,078,418	-		IAI47_14595	0.45	+1.0
3,078,495	+		IAI47_14595	0.49	+1.7
3,078,496	-		IAI47_14595	0.49	+2.2
3,078,498	+		IAI47_14595	0.49	-1.8
3,078,499	-		IAI47_14595	0.49	-0.2
3,078,499	-		IAI47_14595	0.49	+0.7
3,078,499	-		IAI47_14595	0.49	-0.7
3,078,499	-		IAI47_14595	0.49	-0.5
3,078,499	-		IAI47_14595	0.49	-1.7
3,078,499	-		IAI47_14595	0.49	+0.6
3,078,545	+		IAI47_14595	0.52	-0.2
3,078,545	+		IAI47_14595	0.52	-0.6
3,078,546	-		IAI47_14595	0.52	-0.7
3,078,546	-		IAI47_14595	0.52	+1.1
3,078,546	-		IAI47_14595	0.52	+0.3
3,078,546	-		IAI47_14595	0.52	+0.0
3,078,647	+		IAI47_14595	0.58	+1.1
3,078,647	+		IAI47_14595	0.58	-0.9
3,078,647	+		IAI47_14595	0.58	-0.6
3,078,647	+		IAI47_14595	0.58	+0.3
3,078,647	+		IAI47_14595	0.58	+2.4
3,078,647	+		IAI47_14595	0.58	-0.5
3,078,647	+		IAI47_14595	0.58	+0.7
3,078,647	+		IAI47_14595	0.58	-0.6
3,078,648	-		IAI47_14595	0.58	-0.7
3,078,834	+		IAI47_14595	0.68	-1.0
3,078,835	-		IAI47_14595	0.68	-0.2
3,078,835	-		IAI47_14595	0.68	-0.0
3,078,882	+		IAI47_14595	0.71	+1.4
3,078,933	+		IAI47_14595	0.74	+1.5
3,078,934	-		IAI47_14595	0.74	+0.6
3,078,947	-		IAI47_14595	0.75	-2.0
3,079,070	+		IAI47_14595	0.82	-0.7
3,079,070	+		IAI47_14595	0.82	-0.3
3,079,136	+		IAI47_14595	0.85	+0.6
3,079,136	+		IAI47_14595	0.85	-1.7
3,079,137	-		IAI47_14595	0.86	+0.5
3,079,169	+		IAI47_14595	0.87	+0.3
3,079,169	+		IAI47_14595	0.87	+0.9
3,079,169	+		IAI47_14595	0.87	-0.6
3,079,170	-		IAI47_14595	0.87	+1.7
3,079,170	-		IAI47_14595	0.87	+1.0
3,079,170	-		IAI47_14595	0.87	+0.1
3,079,170	-		IAI47_14595	0.87	-1.0
3,079,181	+		IAI47_14595	0.88	+1.8
3,079,182	-		IAI47_14595	0.88	-0.0
3,079,255	+				+0.2
3,079,255	+				+1.0
3,079,255	+				-2.4
3,079,256	-				-1.1
3,079,256	-				+1.3
3,079,256	-				-0.3
3,079,279	+				-1.7
3,079,280	-				+1.0
3,079,280	-				+0.0
3,079,305	+				-0.5
3,079,305	+				-0.9
3,079,305	+				+0.8
3,079,305	+				+0.7
3,079,306	-				-0.5
3,079,306	-				-1.6
3,079,311	+				-0.8
3,079,311	+				-0.5
3,079,311	+				-0.7
3,079,311	+				-0.1
3,079,311	+				-2.6
3,079,311	+				+0.7
3,079,311	+				-1.6
3,079,311	+				-1.7
3,079,311	+				-0.8
3,079,312	-				-0.5
3,079,312	-				+0.2
3,079,318	-				-2.3
3,079,340	+				-0.7
3,079,364	+				+0.5
3,079,365	-				-0.8
3,079,365	-				-0.8
3,079,373	-				+0.2
3,079,433	-				-1.6
3,079,433	-				+0.9
3,079,445	+				-1.3
3,079,445	+				-0.1
3,079,446	-				-0.9
3,079,446	-				+2.6
3,079,446	-				+0.1
3,079,446	-				-1.5
3,079,449	+				-0.4
3,079,449	+				+0.7
3,079,450	-				+3.1
3,079,450	-				-0.6
3,079,450	-				+0.7
3,079,450	-				-1.1
3,079,450	-				+0.9
3,079,450	-				-0.6
3,079,450	-				+1.0
3,079,508	-		IAI47_14600	0.20	+0.4
3,079,517	+		IAI47_14600	0.22	+1.4
3,079,518	-		IAI47_14600	0.22	-0.1
3,079,529	+		IAI47_14600	0.24	-0.3
3,079,529	+		IAI47_14600	0.24	-1.2
3,079,529	+		IAI47_14600	0.24	+0.7
3,079,529	+		IAI47_14600	0.24	-0.8
3,079,529	+		IAI47_14600	0.24	+0.4
3,079,529	+		IAI47_14600	0.24	+0.1
3,079,530	-		IAI47_14600	0.24	+1.4
3,079,530	-		IAI47_14600	0.24	+0.2
3,079,530	-		IAI47_14600	0.24	-1.3
3,079,539	+		IAI47_14600	0.26	+0.4
3,079,565	+		IAI47_14600	0.32	-0.6
3,079,565	+		IAI47_14600	0.32	-0.0
3,079,565	+		IAI47_14600	0.32	-0.1
3,079,566	-		IAI47_14600	0.32	+0.2
3,079,566	-		IAI47_14600	0.32	+0.5
3,079,571	+		IAI47_14600	0.33	+0.2
3,079,571	+		IAI47_14600	0.33	+1.2
3,079,571	+		IAI47_14600	0.33	-3.3
3,079,571	+		IAI47_14600	0.33	-0.8
3,079,571	+		IAI47_14600	0.33	-0.4
3,079,572	-		IAI47_14600	0.34	+0.8
3,079,572	-		IAI47_14600	0.34	-1.1
3,079,572	-		IAI47_14600	0.34	+1.7
3,079,572	-		IAI47_14600	0.34	+0.3
3,079,572	-		IAI47_14600	0.34	+1.0
3,079,572	-		IAI47_14600	0.34	+0.3
3,079,590	-		IAI47_14600	0.37	+0.4
3,079,590	-		IAI47_14600	0.37	-0.7
3,079,614	+		IAI47_14600	0.43	-0.7
3,079,614	+		IAI47_14600	0.43	+1.1
3,079,614	+		IAI47_14600	0.43	+1.3
3,079,614	+		IAI47_14600	0.43	+1.7
3,079,614	+		IAI47_14600	0.43	-0.8
3,079,615	-		IAI47_14600	0.43	+0.9
3,079,615	-		IAI47_14600	0.43	+0.3
3,079,615	-		IAI47_14600	0.43	+0.7
3,079,615	-		IAI47_14600	0.43	+0.3
3,079,615	-		IAI47_14600	0.43	+0.3
3,079,640	+		IAI47_14600	0.48	-0.7
3,079,677	+		IAI47_14600	0.56	-0.1
3,079,677	+		IAI47_14600	0.56	+0.2
3,079,677	+		IAI47_14600	0.56	+0.8
3,079,677	+		IAI47_14600	0.56	+0.2
3,079,677	+		IAI47_14600	0.56	+1.7
3,079,677	+		IAI47_14600	0.56	+0.7
3,079,677	+		IAI47_14600	0.56	+0.7
3,079,677	+		IAI47_14600	0.56	-1.5
3,079,677	+		IAI47_14600	0.56	+0.4
3,079,677	+		IAI47_14600	0.56	+0.8
3,079,678	-		IAI47_14600	0.56	+1.3
3,079,678	-		IAI47_14600	0.56	+0.4
3,079,678	-		IAI47_14600	0.56	-0.2
3,079,678	-		IAI47_14600	0.56	+1.7
3,079,678	-		IAI47_14600	0.56	+1.0
3,079,678	-		IAI47_14600	0.56	+0.9
3,079,678	-		IAI47_14600	0.56	+0.4
3,079,678	-		IAI47_14600	0.56	-0.6
3,079,678	-		IAI47_14600	0.56	+0.0
3,079,705	-		IAI47_14600	0.62	-1.5
3,079,738	-		IAI47_14600	0.69	+1.0
3,079,738	-		IAI47_14600	0.69	+0.5
3,079,738	-		IAI47_14600	0.69	+1.9
3,079,738	-		IAI47_14600	0.69	+0.9
3,079,738	-		IAI47_14600	0.69	+0.7
3,079,788	+		IAI47_14600	0.80	+0.8
3,079,788	+		IAI47_14600	0.80	-0.6
3,079,788	+		IAI47_14600	0.80	-0.4
3,079,788	+		IAI47_14600	0.80	-0.6
3,079,788	+		IAI47_14600	0.80	-0.8
3,079,789	-		IAI47_14600	0.81	+0.1
3,079,789	-		IAI47_14600	0.81	+1.8
3,079,789	-		IAI47_14600	0.81	+0.7
3,079,827	+		IAI47_14600	0.89	-1.0
3,079,921	-				-0.8
3,080,021	+				+0.4
3,080,034	-				+1.0
3,080,034	-				+1.0
3,080,109	+		IAI47_14605	0.11	-0.6
3,080,109	+		IAI47_14605	0.11	-1.5
3,080,109	+		IAI47_14605	0.11	+0.5
3,080,110	-		IAI47_14605	0.11	-1.5
3,080,147	+		IAI47_14605	0.15	+1.3
3,080,148	-		IAI47_14605	0.15	-0.0
3,080,189	+		IAI47_14605	0.19	-0.2
3,080,190	-		IAI47_14605	0.19	-0.7
3,080,190	-		IAI47_14605	0.19	+0.9
3,080,190	-		IAI47_14605	0.19	-0.2
3,080,201	+		IAI47_14605	0.20	+1.0
3,080,201	+		IAI47_14605	0.20	-1.8
3,080,201	+		IAI47_14605	0.20	-1.9
3,080,201	+		IAI47_14605	0.20	-1.1
3,080,202	-		IAI47_14605	0.20	+1.1
3,080,202	-		IAI47_14605	0.20	+0.9
3,080,211	-		IAI47_14605	0.21	-1.5
3,080,211	-		IAI47_14605	0.21	+0.1
3,080,221	+		IAI47_14605	0.22	-0.6
3,080,221	+		IAI47_14605	0.22	-0.2
3,080,221	+		IAI47_14605	0.22	-0.2
3,080,221	+		IAI47_14605	0.22	+0.3
3,080,221	+		IAI47_14605	0.22	-0.2
3,080,221	+		IAI47_14605	0.22	-0.3
3,080,221	+		IAI47_14605	0.22	-0.6
3,080,221	+		IAI47_14605	0.22	-0.9
3,080,221	+		IAI47_14605	0.22	+1.3
3,080,221	+		IAI47_14605	0.22	-0.0
3,080,222	-		IAI47_14605	0.22	+1.7
3,080,222	-		IAI47_14605	0.22	+0.3
3,080,259	+		IAI47_14605	0.26	+1.2
3,080,259	+		IAI47_14605	0.26	+0.3
3,080,259	+		IAI47_14605	0.26	-0.3
3,080,259	+		IAI47_14605	0.26	+0.7
3,080,260	-		IAI47_14605	0.26	+0.2
3,080,260	-		IAI47_14605	0.26	-0.0
3,080,288	+		IAI47_14605	0.28	-0.4
3,080,288	+		IAI47_14605	0.28	+0.1
3,080,288	+		IAI47_14605	0.28	+1.2
3,080,310	-		IAI47_14605	0.30	+0.3
3,080,322	-		IAI47_14605	0.32	-0.0
3,080,385	+		IAI47_14605	0.38	-0.3
3,080,385	+		IAI47_14605	0.38	+1.8
3,080,385	+		IAI47_14605	0.38	+0.8
3,080,385	+		IAI47_14605	0.38	-1.4
3,080,386	-		IAI47_14605	0.38	+1.1
3,080,386	-		IAI47_14605	0.38	+2.6
3,080,429	+		IAI47_14605	0.42	-0.3
3,080,430	-		IAI47_14605	0.42	+1.4
3,080,441	+		IAI47_14605	0.43	+1.2
3,080,442	-		IAI47_14605	0.43	-0.4
3,080,442	-		IAI47_14605	0.43	-0.1
3,080,445	+		IAI47_14605	0.43	+1.0
3,080,445	+		IAI47_14605	0.43	-2.9
3,080,445	+		IAI47_14605	0.43	-0.9
3,080,446	-		IAI47_14605	0.44	-0.9
3,080,446	-		IAI47_14605	0.44	+0.5
3,080,478	-		IAI47_14605	0.47	-0.0
3,080,478	-		IAI47_14605	0.47	-2.7
3,080,478	-		IAI47_14605	0.47	-0.2
3,080,524	-		IAI47_14605	0.51	-1.9
3,080,537	+		IAI47_14605	0.52	-0.0
3,080,538	-		IAI47_14605	0.52	+3.3
3,080,538	-		IAI47_14605	0.52	+1.1
3,080,538	-		IAI47_14605	0.52	+1.3
3,080,589	+		IAI47_14605	0.57	+0.2
3,080,589	+		IAI47_14605	0.57	+0.8
3,080,590	-		IAI47_14605	0.57	+0.4
3,080,591	+		IAI47_14605	0.58	-2.0
3,080,591	+		IAI47_14605	0.58	-0.7
3,080,626	+		IAI47_14605	0.61	+0.3
3,080,658	+		IAI47_14605	0.64	+1.8
3,080,658	+		IAI47_14605	0.64	-0.1
3,080,731	+		IAI47_14605	0.71	-1.8
3,080,744	+		IAI47_14605	0.72	+2.1
3,080,744	+		IAI47_14605	0.72	-0.5
3,080,745	-		IAI47_14605	0.72	+0.8
3,080,771	-		IAI47_14605	0.75	-1.8
3,080,771	-		IAI47_14605	0.75	+0.3
3,080,771	-		IAI47_14605	0.75	+1.4
3,080,847	-		IAI47_14605	0.82	+0.1
3,080,855	+		IAI47_14605	0.83	-0.3
3,080,856	-		IAI47_14605	0.83	-1.2
3,080,856	-		IAI47_14605	0.83	+0.1