Strain Fitness in Pantoea sp. MT58 around IAI47_17445

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,695,183	-		IAI47_17440	0.61	-0.6
3,695,183	-		IAI47_17440	0.61	-1.5
3,695,183	-		IAI47_17440	0.61	-0.2
3,695,206	+		IAI47_17440	0.62	-0.5
3,695,242	+		IAI47_17440	0.64	-1.2
3,695,242	+		IAI47_17440	0.64	+0.8
3,695,242	+		IAI47_17440	0.64	+0.1
3,695,243	-		IAI47_17440	0.64	+0.1
3,695,267	+		IAI47_17440	0.65	+0.1
3,695,268	-		IAI47_17440	0.65	-0.7
3,695,281	+		IAI47_17440	0.65	-0.9
3,695,281	+		IAI47_17440	0.65	-0.1
3,695,282	-		IAI47_17440	0.65	+2.4
3,695,282	-		IAI47_17440	0.65	-0.6
3,695,282	-		IAI47_17440	0.65	-0.5
3,695,356	+		IAI47_17440	0.69	-0.9
3,695,356	+		IAI47_17440	0.69	-0.9
3,695,357	-		IAI47_17440	0.69	-0.8
3,695,357	-		IAI47_17440	0.69	-0.8
3,695,362	+		IAI47_17440	0.69	+0.3
3,695,362	+		IAI47_17440	0.69	-1.8
3,695,362	+		IAI47_17440	0.69	-1.6
3,695,362	+		IAI47_17440	0.69	+1.3
3,695,363	-		IAI47_17440	0.69	-0.1
3,695,363	-		IAI47_17440	0.69	+0.3
3,695,363	-		IAI47_17440	0.69	+2.6
3,695,363	-		IAI47_17440	0.69	-0.9
3,695,396	+		IAI47_17440	0.70	-0.2
3,695,396	+		IAI47_17440	0.70	+0.6
3,695,396	+		IAI47_17440	0.70	-1.1
3,695,396	+		IAI47_17440	0.70	-0.2
3,695,396	+		IAI47_17440	0.70	+0.4
3,695,397	-		IAI47_17440	0.70	-0.4
3,695,485	+		IAI47_17440	0.74	-0.3
3,695,485	+		IAI47_17440	0.74	+1.3
3,695,485	+		IAI47_17440	0.74	-2.0
3,695,486	-		IAI47_17440	0.74	-1.7
3,695,558	+		IAI47_17440	0.77	+0.1
3,695,582	+		IAI47_17440	0.78	+0.9
3,695,583	-		IAI47_17440	0.78	-2.8
3,695,585	+		IAI47_17440	0.78	-1.2
3,695,585	+		IAI47_17440	0.78	+0.1
3,695,585	+		IAI47_17440	0.78	+0.6
3,695,608	+		IAI47_17440	0.79	+1.0
3,695,636	-		IAI47_17440	0.80	-0.3
3,695,732	-		IAI47_17440	0.84	-1.3
3,695,732	-		IAI47_17440	0.84	-1.7
3,695,784	+		IAI47_17440	0.87	+0.8
3,695,791	+		IAI47_17440	0.87	-0.5
3,695,791	+		IAI47_17440	0.87	-1.9
3,695,868	+				+0.1
3,695,869	-				+1.0
3,695,869	-				-0.3
3,695,869	-				+0.0
3,695,948	+				-0.6
3,695,948	+				-0.8
3,695,948	+				+0.5
3,695,948	+				-0.6
3,695,968	-				-0.8
3,695,980	+				-0.1
3,696,052	-				+0.6
3,696,163	+				-1.6
3,696,164	-				-0.5
3,696,164	-				+1.8
3,696,164	-				-0.1
3,696,171	-				-0.8
3,696,201	+				+0.3
3,696,201	+				-0.4
3,696,201	+				-0.6
3,696,201	+				-0.5
3,696,201	+				+0.4
3,696,201	+				+0.2
3,696,201	+				-0.1
3,696,201	+				-0.3
3,696,201	+				-0.2
3,696,201	+				+0.6
3,696,201	+				-0.0
3,696,201	+				-2.3
3,696,202	-				-0.2
3,696,202	-				-0.6
3,696,202	-				-0.2
3,696,202	-				-1.2
3,696,202	-				+0.1
3,696,202	-				-0.5
3,696,202	-				-0.5
3,696,202	-				-0.9
3,696,202	-				-1.2
3,696,202	-				-1.1
3,696,202	-				+1.1
3,696,202	-				+1.0
3,696,202	-				-2.0
3,696,202	-				-0.2
3,696,202	-				-0.6
3,696,202	-				-0.2
3,696,202	-				-0.2
3,696,244	+				-0.2
3,696,262	+				+0.4
3,696,309	+				-0.5
3,696,309	+				-0.0
3,696,310	-				-1.0
3,696,310	-				-0.5
3,696,343	-				-0.5
3,696,394	+		IAI47_17445	0.11	+0.7
3,696,395	-		IAI47_17445	0.11	-1.0
3,696,395	-		IAI47_17445	0.11	-0.9
3,696,577	+		IAI47_17445	0.18	+0.4
3,696,584	-		IAI47_17445	0.18	+0.7
3,696,622	+		IAI47_17445	0.20	+0.2
3,696,622	+		IAI47_17445	0.20	-0.5
3,696,622	+		IAI47_17445	0.20	+0.8
3,696,645	+		IAI47_17445	0.20	+0.1
3,696,645	+		IAI47_17445	0.20	+3.3
3,696,645	+		IAI47_17445	0.20	-0.2
3,696,645	+		IAI47_17445	0.20	-2.5
3,696,645	+		IAI47_17445	0.20	+0.3
3,696,645	+		IAI47_17445	0.20	+0.7
3,696,645	+		IAI47_17445	0.20	+1.4
3,696,645	+		IAI47_17445	0.20	-1.2
3,696,645	+		IAI47_17445	0.20	+0.6
3,696,645	+		IAI47_17445	0.20	+0.2
3,696,646	-		IAI47_17445	0.21	-2.1
3,696,646	-		IAI47_17445	0.21	+0.2
3,696,705	+		IAI47_17445	0.23	-0.2
3,696,705	+		IAI47_17445	0.23	+0.3
3,696,705	+		IAI47_17445	0.23	+0.4
3,696,706	-		IAI47_17445	0.23	+0.5
3,696,715	+		IAI47_17445	0.23	-1.8
3,696,715	+		IAI47_17445	0.23	-0.7
3,696,715	+		IAI47_17445	0.23	-0.4
3,696,716	-		IAI47_17445	0.23	-0.3
3,696,719	+		IAI47_17445	0.23	+2.0
3,696,719	+		IAI47_17445	0.23	-0.5
3,696,720	-		IAI47_17445	0.23	+1.3
3,696,760	-		IAI47_17445	0.25	+1.7
3,696,760	-		IAI47_17445	0.25	+0.4
3,696,760	-		IAI47_17445	0.25	+0.3
3,696,788	+		IAI47_17445	0.26	-0.1
3,696,807	+		IAI47_17445	0.27	-0.6
3,696,826	+		IAI47_17445	0.27	-0.7
3,696,827	-		IAI47_17445	0.27	-0.1
3,696,827	-		IAI47_17445	0.27	+0.0
3,696,849	+		IAI47_17445	0.28	-2.3
3,696,850	-		IAI47_17445	0.28	+0.3
3,697,100	-		IAI47_17445	0.38	-0.8
3,697,100	-		IAI47_17445	0.38	-0.7
3,697,193	-		IAI47_17445	0.41	-0.4
3,697,207	+		IAI47_17445	0.42	-0.6
3,697,393	+		IAI47_17445	0.49	+1.1
3,697,393	+		IAI47_17445	0.49	+1.9
3,697,405	+		IAI47_17445	0.49	+0.9
3,697,405	+		IAI47_17445	0.49	+0.9
3,697,405	+		IAI47_17445	0.49	-0.0
3,697,412	+		IAI47_17445	0.49	-0.8
3,697,412	+		IAI47_17445	0.49	+1.1
3,697,412	+		IAI47_17445	0.49	+1.4
3,697,412	+		IAI47_17445	0.49	-0.2
3,697,413	-		IAI47_17445	0.49	-0.0
3,697,413	-		IAI47_17445	0.49	-2.1
3,697,413	-		IAI47_17445	0.49	+0.7
3,697,413	-		IAI47_17445	0.49	-0.9
3,697,413	-		IAI47_17445	0.49	+0.8
3,697,413	-		IAI47_17445	0.49	+1.9
3,697,413	-		IAI47_17445	0.49	-0.5
3,697,413	-		IAI47_17445	0.49	-0.1
3,697,413	-		IAI47_17445	0.49	+0.3
3,697,432	+		IAI47_17445	0.50	-0.1
3,697,432	+		IAI47_17445	0.50	+1.6
3,697,433	-		IAI47_17445	0.50	-0.5
3,697,433	-		IAI47_17445	0.50	+0.2
3,697,558	+		IAI47_17445	0.55	+0.1
3,697,558	+		IAI47_17445	0.55	-0.4
3,697,559	-		IAI47_17445	0.55	+0.3
3,697,559	-		IAI47_17445	0.55	+0.8
3,697,559	-		IAI47_17445	0.55	-0.8
3,697,559	-		IAI47_17445	0.55	+1.0
3,697,559	-		IAI47_17445	0.55	+0.1
3,697,559	-		IAI47_17445	0.55	-0.0
3,697,568	-		IAI47_17445	0.55	-0.2
3,697,568	-		IAI47_17445	0.55	-1.8
3,697,568	-		IAI47_17445	0.55	+0.2
3,697,686	+		IAI47_17445	0.60	-1.7
3,697,686	+		IAI47_17445	0.60	-1.6
3,697,687	-		IAI47_17445	0.60	-1.7
3,697,687	-		IAI47_17445	0.60	+0.6
3,697,687	-		IAI47_17445	0.60	+0.3
3,697,695	+		IAI47_17445	0.60	+3.5
3,697,696	-		IAI47_17445	0.60	+0.3
3,697,789	+		IAI47_17445	0.64	-1.5
3,697,853	+		IAI47_17445	0.66	-0.6
3,697,853	+		IAI47_17445	0.66	+0.6
3,697,853	+		IAI47_17445	0.66	+1.3
3,697,853	+		IAI47_17445	0.66	-0.3
3,697,853	+		IAI47_17445	0.66	-2.4
3,697,853	+		IAI47_17445	0.66	-0.3
3,697,853	+		IAI47_17445	0.66	-0.2
3,697,853	+		IAI47_17445	0.66	-0.3
3,697,854	-		IAI47_17445	0.66	+0.0
3,697,854	-		IAI47_17445	0.66	-0.2
3,697,854	-		IAI47_17445	0.66	-0.7
3,697,946	-		IAI47_17445	0.69	-0.8
3,698,164	+		IAI47_17445	0.78	+0.4
3,698,277	+		IAI47_17445	0.82	-1.4
3,698,277	+		IAI47_17445	0.82	-0.3
3,698,277	+		IAI47_17445	0.82	+1.4
3,698,277	+		IAI47_17445	0.82	-1.0
3,698,277	+		IAI47_17445	0.82	-0.5
3,698,278	-		IAI47_17445	0.82	+0.1
3,698,278	-		IAI47_17445	0.82	-0.6
3,698,382	-		IAI47_17445	0.86	-0.7
3,698,446	+		IAI47_17445	0.88	-0.3
3,698,446	+		IAI47_17445	0.88	+2.8
3,698,446	+		IAI47_17445	0.88	+0.7
3,698,446	+		IAI47_17445	0.88	-0.6
3,698,447	-		IAI47_17445	0.88	+0.8
3,698,447	-		IAI47_17445	0.88	+0.4
3,698,447	-		IAI47_17445	0.88	+2.8
3,698,447	-		IAI47_17445	0.88	+2.4
3,698,447	-		IAI47_17445	0.88	+1.0
3,698,447	-		IAI47_17445	0.88	+2.1
3,698,573	-				+1.7
3,698,573	-				-0.4
3,698,583	+				+2.5
3,698,583	+				+0.4
3,698,583	+				+0.3
3,698,715	+				+0.3
3,698,715	+				-0.1
3,698,715	+				-0.1
3,698,715	+				-0.2
3,698,715	+				-0.1
3,698,716	-				-0.1
3,698,716	-				+0.1
3,698,716	-				+0.4
3,698,716	-				-0.6
3,698,755	+				+0.7
3,698,812	-				+0.8
3,698,930	-				-0.4
3,698,983	+		IAI47_17450	0.11	+1.3
3,698,983	+		IAI47_17450	0.11	-0.6
3,698,983	+		IAI47_17450	0.11	+0.7
3,698,983	+		IAI47_17450	0.11	+0.4
3,698,984	-		IAI47_17450	0.11	-1.2
3,698,984	-		IAI47_17450	0.11	-3.1
3,699,043	+		IAI47_17450	0.23	+0.9
3,699,043	+		IAI47_17450	0.23	+0.1
3,699,044	-		IAI47_17450	0.24	-1.1
3,699,044	-		IAI47_17450	0.24	-2.1
3,699,044	-		IAI47_17450	0.24	-0.9
3,699,064	+		IAI47_17450	0.28	-3.0
3,699,064	+		IAI47_17450	0.28	+0.4
3,699,064	+		IAI47_17450	0.28	+0.5
3,699,064	+		IAI47_17450	0.28	-1.5
3,699,064	+		IAI47_17450	0.28	-0.5
3,699,064	+		IAI47_17450	0.28	-1.0
3,699,064	+		IAI47_17450	0.28	+2.1
3,699,065	-		IAI47_17450	0.28	-1.6
3,699,065	-		IAI47_17450	0.28	-0.6
3,699,118	+		IAI47_17450	0.39	-0.4
3,699,118	+		IAI47_17450	0.39	+0.1
3,699,119	-				-1.1
3,699,119	-		IAI47_17450	0.39	-1.7
3,699,119	-		IAI47_17450	0.39	-1.3
3,699,119	-		IAI47_17450	0.39	-1.6
3,699,151	+		IAI47_17450	0.45	+0.1
3,699,151	+		IAI47_17450	0.45	-2.1
3,699,202	+		IAI47_17450	0.56	+0.0
3,699,202	+		IAI47_17450	0.56	+0.5
3,699,202	+		IAI47_17450	0.56	+0.7
3,699,202	+		IAI47_17450	0.56	+1.1
3,699,202	+		IAI47_17450	0.56	-0.1
3,699,202	+		IAI47_17450	0.56	-0.2
3,699,203	-		IAI47_17450	0.56	-2.5
3,699,203	-		IAI47_17450	0.56	-1.9
3,699,203	-		IAI47_17450	0.56	-0.4
3,699,203	-		IAI47_17450	0.56	+0.8
3,699,208	+		IAI47_17450	0.57	-0.2
3,699,209	-		IAI47_17450	0.57	-1.5
3,699,236	+		IAI47_17450	0.63	-1.4
3,699,237	-		IAI47_17450	0.63	-0.4
3,699,301	+		IAI47_17450	0.76	+0.5
3,699,301	+		IAI47_17450	0.76	+0.8
3,699,301	+		IAI47_17450	0.76	-2.8
3,699,301	+		IAI47_17450	0.76	+0.9
3,699,301	+		IAI47_17450	0.76	-0.3
3,699,301	+		IAI47_17450	0.76	-0.3
3,699,302	-		IAI47_17450	0.76	-0.7
3,699,302	-		IAI47_17450	0.76	+0.9
3,699,302	-		IAI47_17450	0.76	-0.3
3,699,302	-		IAI47_17450	0.76	-1.2
3,699,302	-		IAI47_17450	0.76	-0.7
3,699,302	-		IAI47_17450	0.76	-3.2
3,699,302	-		IAI47_17450	0.76	-0.6
3,699,302	-		IAI47_17450	0.76	-2.8
3,699,302	-		IAI47_17450	0.76	-2.7
3,699,308	+		IAI47_17450	0.77	-0.5
3,699,308	+		IAI47_17450	0.77	-0.2
3,699,308	+		IAI47_17450	0.77	-0.3
3,699,309	-		IAI47_17450	0.77	+1.4
3,699,309	-		IAI47_17450	0.77	-0.5
3,699,368	+		IAI47_17450	0.89	-1.3
3,699,368	+		IAI47_17450	0.89	-0.8
3,699,369	-		IAI47_17450	0.90	+1.3
3,699,369	-		IAI47_17450	0.90	-1.9
3,699,369	-		IAI47_17450	0.90	+0.1
3,699,403	+				-1.6
3,699,403	+				+1.2
3,699,403	+				+0.1
3,699,404	-				-1.0
3,699,425	+				-1.2
3,699,425	+				-0.8
3,699,425	+				+0.1
3,699,425	+				+0.5
3,699,425	+				+1.2
3,699,425	+				+0.2
3,699,426	-				+0.5
3,699,426	-				-0.1
3,699,426	-				-0.8
3,699,426	-				-1.7
3,699,426	-				-0.2
3,699,445	+				+0.1
3,699,445	+				-0.4
3,699,445	+				-0.4
3,699,445	+				+1.8
3,699,445	+				+0.3
3,699,445	+				+0.2
3,699,445	+				-1.3
3,699,445	+				-0.5
3,699,445	+				+0.9
3,699,445	+				-1.0
3,699,446	-				-4.1
3,699,446	-				-2.5
3,699,446	-				+0.8
3,699,446	-				-1.4
3,699,446	-				-2.1
3,699,446	-				-1.4
3,699,485	-				-1.3
3,699,587	+				-1.2
3,699,709	-		IAI47_17455	0.17	-0.5
3,699,709	-		IAI47_17455	0.17	-1.0
3,699,748	-		IAI47_17455	0.19	-0.4