Strain Fitness in Pantoea sp. MT58 around IAI47_10665

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,256,393	-		IAI47_10660	0.63	-0.8
2,256,394	+		IAI47_10660	0.63	+1.0
2,256,394	+		IAI47_10660	0.63	+0.2
2,256,518	+		IAI47_10660	0.68	+0.5
2,256,518	+		IAI47_10660	0.68	+0.1
2,256,518	+		IAI47_10660	0.68	-0.4
2,256,518	+		IAI47_10660	0.68	-0.0
2,256,519	-		IAI47_10660	0.68	-0.4
2,256,519	-		IAI47_10660	0.68	-2.0
2,256,519	-		IAI47_10660	0.68	-1.0
2,256,577	-		IAI47_10660	0.70	-1.1
2,256,605	+		IAI47_10660	0.71	+0.1
2,256,605	+		IAI47_10660	0.71	-0.4
2,256,605	+		IAI47_10660	0.71	-2.1
2,256,605	+		IAI47_10660	0.71	+1.2
2,256,606	-		IAI47_10660	0.71	-0.5
2,256,606	-		IAI47_10660	0.71	-1.1
2,256,668	+		IAI47_10660	0.74	+1.2
2,256,669	-		IAI47_10660	0.74	+1.0
2,256,669	-		IAI47_10660	0.74	-1.8
2,256,669	-		IAI47_10660	0.74	-0.2
2,256,669	-		IAI47_10660	0.74	+1.3
2,256,690	-		IAI47_10660	0.75	-0.3
2,256,690	-		IAI47_10660	0.75	+0.5
2,256,760	+		IAI47_10660	0.77	-1.4
2,256,761	-		IAI47_10660	0.77	+0.8
2,256,809	-		IAI47_10660	0.79	+1.6
2,256,830	-		IAI47_10660	0.80	+0.1
2,256,833	+		IAI47_10660	0.80	+0.7
2,256,833	+		IAI47_10660	0.80	-2.1
2,256,834	-		IAI47_10660	0.80	-1.6
2,256,834	-		IAI47_10660	0.80	-0.6
2,256,919	+		IAI47_10660	0.84	+0.4
2,257,076	-		IAI47_10660	0.90	+1.8
2,257,076	-		IAI47_10660	0.90	-0.8
2,257,122	+				-1.3
2,257,122	+				+0.1
2,257,122	+				-0.5
2,257,122	+				-0.2
2,257,122	+				+1.1
2,257,123	+				-0.5
2,257,123	-				-1.9
2,257,123	-				-0.5
2,257,123	-				+1.0
2,257,123	-				+1.3
2,257,123	-				-2.4
2,257,123	-				-0.3
2,257,123	-				-0.5
2,257,123	-				+0.4
2,257,196	-				+1.3
2,257,231	+				+0.2
2,257,231	+				+0.1
2,257,232	-				+0.6
2,257,232	-				+1.7
2,257,232	-				+1.6
2,257,235	+				+1.0
2,257,235	+				-0.6
2,257,236	-				+1.0
2,257,236	-				+1.6
2,257,236	-				+2.0
2,257,256	-				+1.5
2,257,256	-				-1.1
2,257,289	-				+0.0
2,257,289	-				+1.6
2,257,289	-				-0.5
2,257,289	-				+0.9
2,257,344	+				-2.2
2,257,344	+				+1.1
2,257,345	-				-1.3
2,257,345	-				-1.5
2,257,345	-				-0.3
2,257,352	+				-0.8
2,257,353	-				-1.4
2,257,353	-				-0.9
2,257,355	-				+0.3
2,257,355	-				+1.3
2,257,387	+				+0.7
2,257,387	+				+2.1
2,257,387	+				-1.5
2,257,387	+				+0.9
2,257,388	-				-1.0
2,257,388	-				-0.0
2,257,388	-				+0.9
2,257,417	-				-2.1
2,257,417	-				-0.3
2,257,436	+				+1.4
2,257,436	+				-0.9
2,257,436	+				-0.8
2,257,437	-				-0.5
2,257,516	+				-1.0
2,257,517	-				-2.2
2,257,564	+				-1.1
2,257,564	+				+1.3
2,257,565	-				+1.0
2,257,565	-				+0.1
2,257,565	-				+1.0
2,257,565	-				+1.3
2,257,565	-				+1.1
2,257,566	+				+1.9
2,257,567	-				+1.9
2,257,567	-				-0.6
2,257,567	-				+1.0
2,257,567	-				-0.3
2,257,567	-				-1.5
2,257,567	-				+1.5
2,257,567	-				-0.3
2,257,577	+				+0.7
2,257,577	+				+0.7
2,257,577	+				-1.3
2,257,578	-				+0.5
2,257,578	-				+0.1
2,257,578	-				+0.4
2,257,588	+				-0.4
2,257,618	+		IAI47_10665	0.11	-0.1
2,257,618	+		IAI47_10665	0.11	+0.5
2,257,619	-		IAI47_10665	0.11	-1.9
2,257,633	+		IAI47_10665	0.12	+0.1
2,257,643	-		IAI47_10665	0.12	+0.2
2,257,643	-		IAI47_10665	0.12	-0.1
2,257,643	-		IAI47_10665	0.12	-0.7
2,257,643	-		IAI47_10665	0.12	-0.5
2,257,683	-		IAI47_10665	0.14	+1.9
2,257,748	-		IAI47_10665	0.17	+0.6
2,257,756	+		IAI47_10665	0.18	-0.0
2,257,757	-		IAI47_10665	0.18	-0.1
2,257,757	-		IAI47_10665	0.18	-0.1
2,257,806	+		IAI47_10665	0.20	+0.8
2,257,806	+		IAI47_10665	0.20	+2.3
2,257,806	+		IAI47_10665	0.20	+1.3
2,257,807	-		IAI47_10665	0.20	-0.7
2,257,807	-		IAI47_10665	0.20	+0.8
2,257,833	+		IAI47_10665	0.21	-0.4
2,257,894	+		IAI47_10665	0.24	+0.6
2,257,894	+				+0.3
2,257,894	+		IAI47_10665	0.24	-0.7
2,257,894	+		IAI47_10665	0.24	+0.3
2,257,895	-		IAI47_10665	0.24	-0.2
2,257,895	-		IAI47_10665	0.24	+0.4
2,257,895	-		IAI47_10665	0.24	-0.9
2,257,895	-		IAI47_10665	0.24	-0.1
2,257,977	+		IAI47_10665	0.28	-2.5
2,257,993	+		IAI47_10665	0.29	+0.1
2,257,993	+		IAI47_10665	0.29	+0.7
2,257,993	+		IAI47_10665	0.29	+2.1
2,257,993	+		IAI47_10665	0.29	+0.3
2,257,993	+		IAI47_10665	0.29	+1.3
2,257,993	+		IAI47_10665	0.29	+1.8
2,257,994	-		IAI47_10665	0.29	-2.3
2,257,994	-		IAI47_10665	0.29	+0.4
2,257,994	-		IAI47_10665	0.29	-1.8
2,257,998	+		IAI47_10665	0.29	+1.5
2,257,998	+		IAI47_10665	0.29	+2.3
2,257,998	+		IAI47_10665	0.29	-2.1
2,257,998	+		IAI47_10665	0.29	-1.1
2,257,998	+		IAI47_10665	0.29	+1.5
2,257,999	-		IAI47_10665	0.29	-1.1
2,258,013	+		IAI47_10665	0.30	-1.3
2,258,013	+		IAI47_10665	0.30	+1.5
2,258,014	-		IAI47_10665	0.30	+0.7
2,258,070	+		IAI47_10665	0.33	+1.3
2,258,095	-		IAI47_10665	0.34	-0.1
2,258,131	+		IAI47_10665	0.36	+0.3
2,258,131	+		IAI47_10665	0.36	+1.3
2,258,218	+		IAI47_10665	0.40	-0.3
2,258,219	-		IAI47_10665	0.40	+0.9
2,258,219	-		IAI47_10665	0.40	-0.3
2,258,219	-		IAI47_10665	0.40	-0.2
2,258,277	+		IAI47_10665	0.43	+1.3
2,258,287	+		IAI47_10665	0.43	-0.4
2,258,287	+		IAI47_10665	0.43	-0.5
2,258,288	-		IAI47_10665	0.43	-0.6
2,258,288	-		IAI47_10665	0.43	+0.4
2,258,288	-		IAI47_10665	0.43	+1.0
2,258,290	+		IAI47_10665	0.43	+0.4
2,258,295	+		IAI47_10665	0.44	-1.2
2,258,295	+		IAI47_10665	0.44	-0.7
2,258,296	-		IAI47_10665	0.44	-0.5
2,258,296	-		IAI47_10665	0.44	-0.7
2,258,317	+		IAI47_10665	0.45	+1.4
2,258,318	-		IAI47_10665	0.45	+0.5
2,258,318	-		IAI47_10665	0.45	-0.0
2,258,318	-		IAI47_10665	0.45	+0.5
2,258,320	+		IAI47_10665	0.45	-0.5
2,258,321	-		IAI47_10665	0.45	+0.2
2,258,321	-		IAI47_10665	0.45	+0.3
2,258,321	-		IAI47_10665	0.45	-0.7
2,258,321	-		IAI47_10665	0.45	+0.2
2,258,321	-		IAI47_10665	0.45	+0.1
2,258,321	-		IAI47_10665	0.45	+1.9
2,258,321	-		IAI47_10665	0.45	+0.4
2,258,321	-		IAI47_10665	0.45	-0.7
2,258,321	-		IAI47_10665	0.45	+0.3
2,258,401	+		IAI47_10665	0.49	+1.9
2,258,402	-		IAI47_10665	0.49	-0.5
2,258,421	+		IAI47_10665	0.50	-2.3
2,258,421	+		IAI47_10665	0.50	+1.0
2,258,422	-		IAI47_10665	0.50	-0.2
2,258,422	-		IAI47_10665	0.50	+1.6
2,258,520	+		IAI47_10665	0.54	+1.0
2,258,623	+		IAI47_10665	0.59	+0.2
2,258,645	-		IAI47_10665	0.60	+1.4
2,258,658	+		IAI47_10665	0.61	+1.1
2,258,659	-		IAI47_10665	0.61	-1.0
2,258,659	-		IAI47_10665	0.61	+0.4
2,258,659	-		IAI47_10665	0.61	+2.2
2,258,707	+		IAI47_10665	0.63	-0.6
2,258,752	-		IAI47_10665	0.66	+3.2
2,258,791	+		IAI47_10665	0.67	+2.3
2,258,791	+		IAI47_10665	0.67	+2.6
2,258,791	+		IAI47_10665	0.67	-1.5
2,258,792	-		IAI47_10665	0.68	-1.6
2,258,792	-		IAI47_10665	0.68	+1.3
2,258,806	-		IAI47_10665	0.68	+0.9
2,258,806	-		IAI47_10665	0.68	+1.1
2,258,826	+		IAI47_10665	0.69	-0.9
2,258,826	+		IAI47_10665	0.69	+1.7
2,258,829	+		IAI47_10665	0.69	+0.6
2,258,830	-		IAI47_10665	0.69	+0.3
2,258,857	+		IAI47_10665	0.71	+0.2
2,258,857	+		IAI47_10665	0.71	-2.1
2,258,857	+		IAI47_10665	0.71	-1.9
2,258,857	+		IAI47_10665	0.71	+0.3
2,258,857	+		IAI47_10665	0.71	+1.1
2,258,857	+		IAI47_10665	0.71	+0.7
2,258,857	+		IAI47_10665	0.71	+0.9
2,258,857	+		IAI47_10665	0.71	+0.3
2,258,857	+		IAI47_10665	0.71	-0.5
2,258,858	-		IAI47_10665	0.71	+0.5
2,258,858	-		IAI47_10665	0.71	+0.5
2,258,864	-		IAI47_10665	0.71	+1.3
2,258,864	-		IAI47_10665	0.71	+1.1
2,258,926	-		IAI47_10665	0.74	+0.2
2,258,926	-		IAI47_10665	0.74	+0.8
2,258,926	-		IAI47_10665	0.74	+0.2
2,258,926	-		IAI47_10665	0.74	+0.0
2,259,048	-		IAI47_10665	0.80	+0.7
2,259,238	+		IAI47_10665	0.89	+1.7
2,259,238	+		IAI47_10665	0.89	+0.1
2,259,238	+		IAI47_10665	0.89	+0.8
2,259,238	+		IAI47_10665	0.89	+0.7
2,259,239	-		IAI47_10665	0.89	+0.9
2,259,239	-		IAI47_10665	0.89	+0.1
2,259,241	-		IAI47_10665	0.89	+0.7
2,259,287	+				+1.6
2,259,287	+				-0.1
2,259,287	+				+0.7
2,259,287	+				+0.2
2,259,287	+				-1.8
2,259,287	+				+0.5
2,259,287	+				+1.3
2,259,287	+				+0.9
2,259,288	-				-2.4
2,259,288	-				-2.3
2,259,288	-				+0.4
2,259,301	-				-0.3
2,259,463	+				-0.9
2,259,480	+				+0.7
2,259,559	+				+0.9
2,259,560	-				-0.3
2,259,560	-				+0.3
2,259,560	-				-1.0
2,259,560	-				+0.3
2,259,562	+				+0.1
2,259,563	-				+0.3
2,259,582	-				-0.2
2,259,706	+		IAI47_10670	0.15	-0.5
2,259,796	+		IAI47_10670	0.27	+1.9
2,259,796	+		IAI47_10670	0.27	-1.8
2,259,827	+		IAI47_10670	0.31	+1.5
2,259,853	+		IAI47_10670	0.34	-1.8
2,259,853	+		IAI47_10670	0.34	-0.9
2,259,853	+		IAI47_10670	0.34	-0.4
2,259,854	-		IAI47_10670	0.34	-0.1
2,259,956	+		IAI47_10670	0.47	-0.9
2,259,956	+		IAI47_10670	0.47	-0.2
2,259,956	+		IAI47_10670	0.47	+0.4
2,259,957	-		IAI47_10670	0.48	+2.8
2,259,976	-		IAI47_10670	0.50	+1.2
2,260,046	+		IAI47_10670	0.59	+0.6
2,260,046	+		IAI47_10670	0.59	+1.3
2,260,046	+		IAI47_10670	0.59	+2.0
2,260,047	-		IAI47_10670	0.59	+0.8
2,260,047	-		IAI47_10670	0.59	-1.5
2,260,047	-		IAI47_10670	0.59	-0.3
2,260,048	+		IAI47_10670	0.59	+0.8
2,260,049	-		IAI47_10670	0.60	+1.7
2,260,070	-		IAI47_10670	0.62	-0.3
2,260,094	-		IAI47_10670	0.65	+0.2
2,260,117	-		IAI47_10670	0.68	+0.7
2,260,144	+		IAI47_10670	0.72	-1.0
2,260,144	+		IAI47_10670	0.72	+0.5
2,260,145	-		IAI47_10670	0.72	+0.1
2,260,286	+				-0.1
2,260,286	+				-0.5
2,260,286	+				-0.9
2,260,287	-				-0.8
2,260,287	-				-0.1
2,260,287	-				+0.5
2,260,287	-				-0.2
2,260,288	+				+0.4
2,260,289	-				-0.8
2,260,289	-				+0.6
2,260,291	+				-2.7
2,260,291	+				+2.0
2,260,346	-				+1.0
2,260,355	+				-0.3
2,260,355	+				+0.5
2,260,355	+				-0.8
2,260,355	+				+0.6
2,260,356	-				-0.1
2,260,359	+				+2.3
2,260,376	+				-0.8
2,260,377	-				-0.3
2,260,422	+				-0.7
2,260,433	+				-0.1
2,260,445	+				+0.9
2,260,446	-				+0.1
2,260,460	-				+0.3