Strain Fitness in Pantoea sp. MT58 around IAI47_09890

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,094,066	+				+1.6
2,094,066	+				-0.5
2,094,067	-				-1.1
2,094,118	+		IAI47_09885	0.13	+0.5
2,094,118	+		IAI47_09885	0.13	-1.6
2,094,240	-		IAI47_09885	0.25	-1.3
2,094,240	-		IAI47_09885	0.25	-1.7
2,094,266	-		IAI47_09885	0.27	-1.8
2,094,281	+		IAI47_09885	0.29	+0.7
2,094,412	+		IAI47_09885	0.41	+0.9
2,094,413	-		IAI47_09885	0.41	-2.1
2,094,545	-		IAI47_09885	0.54	+2.9
2,094,545	-		IAI47_09885	0.54	+0.0
2,094,554	+		IAI47_09885	0.55	-1.1
2,094,554	+		IAI47_09885	0.55	+1.1
2,094,554	+		IAI47_09885	0.55	+1.2
2,094,554	+		IAI47_09885	0.55	-0.2
2,094,554	+		IAI47_09885	0.55	-1.0
2,094,554	+		IAI47_09885	0.55	+3.8
2,094,555	-		IAI47_09885	0.55	-0.5
2,094,555	-		IAI47_09885	0.55	-1.5
2,094,555	-		IAI47_09885	0.55	-0.1
2,094,555	-		IAI47_09885	0.55	+0.4
2,094,555	-		IAI47_09885	0.55	-1.7
2,094,601	+		IAI47_09885	0.59	+1.4
2,094,601	+		IAI47_09885	0.59	+0.8
2,094,601	+		IAI47_09885	0.59	-1.7
2,094,601	+		IAI47_09885	0.59	-0.2
2,094,601	+		IAI47_09885	0.59	+0.9
2,094,601	+		IAI47_09885	0.59	+0.9
2,094,601	+		IAI47_09885	0.59	-0.2
2,094,602	-		IAI47_09885	0.59	+0.4
2,094,602	-		IAI47_09885	0.59	+1.1
2,094,602	-		IAI47_09885	0.59	+0.9
2,094,602	-		IAI47_09885	0.59	-1.1
2,094,602	-		IAI47_09885	0.59	-0.5
2,094,623	-		IAI47_09885	0.61	+0.6
2,094,653	+		IAI47_09885	0.64	-1.3
2,094,653	+		IAI47_09885	0.64	+0.7
2,094,654	-		IAI47_09885	0.64	+1.7
2,094,654	-		IAI47_09885	0.64	+0.7
2,094,654	-		IAI47_09885	0.64	-0.8
2,094,654	-		IAI47_09885	0.64	-1.2
2,094,676	+		IAI47_09885	0.66	+1.8
2,094,677	-		IAI47_09885	0.66	+1.4
2,094,703	+		IAI47_09885	0.69	+0.3
2,094,704	-		IAI47_09885	0.69	+0.5
2,094,794	-		IAI47_09885	0.77	+0.0
2,094,832	+		IAI47_09885	0.81	-0.5
2,094,833	-		IAI47_09885	0.81	-0.1
2,094,835	+		IAI47_09885	0.81	-0.4
2,094,835	+		IAI47_09885	0.81	-0.9
2,094,835	+		IAI47_09885	0.81	-0.4
2,094,835	+		IAI47_09885	0.81	-0.2
2,094,835	+		IAI47_09885	0.81	+0.7
2,094,835	+		IAI47_09885	0.81	+0.5
2,094,835	+		IAI47_09885	0.81	+0.1
2,094,835	+		IAI47_09885	0.81	-0.7
2,094,835	+		IAI47_09885	0.81	+0.3
2,094,836	-		IAI47_09885	0.81	+2.3
2,094,836	-		IAI47_09885	0.81	+0.9
2,094,836	-		IAI47_09885	0.81	+0.5
2,094,836	-		IAI47_09885	0.81	+1.3
2,094,904	+		IAI47_09885	0.87	-0.3
2,094,905	-		IAI47_09885	0.88	+0.7
2,094,905	-		IAI47_09885	0.88	-0.7
2,094,911	+		IAI47_09885	0.88	+0.9
2,094,911	+		IAI47_09885	0.88	+0.8
2,094,912	-		IAI47_09885	0.88	+0.5
2,094,990	+				-0.6
2,094,990	+				-1.6
2,094,990	+				+0.3
2,094,991	-				+0.2
2,094,991	-				+0.8
2,094,991	-				+0.9
2,094,991	-				+0.2
2,095,003	+				+3.4
2,095,004	-				+0.4
2,095,004	-				+1.3
2,095,004	-				+0.3
2,095,004	-				-0.5
2,095,034	+				-1.3
2,095,097	+				+0.9
2,095,137	-				-0.6
2,095,170	-		IAI47_09890	0.14	-0.5
2,095,220	+		IAI47_09890	0.20	-0.4
2,095,221	-		IAI47_09890	0.20	-1.2
2,095,221	-		IAI47_09890	0.20	-1.4
2,095,221	-		IAI47_09890	0.20	+0.6
2,095,244	+		IAI47_09890	0.23	+1.8
2,095,245	-		IAI47_09890	0.23	+0.9
2,095,245	-		IAI47_09890	0.23	+1.5
2,095,312	+		IAI47_09890	0.32	+0.5
2,095,312	+		IAI47_09890	0.32	-0.3
2,095,438	+		IAI47_09890	0.48	-0.7
2,095,438	+		IAI47_09890	0.48	+1.1
2,095,439	-		IAI47_09890	0.48	-0.5
2,095,439	-		IAI47_09890	0.48	+0.3
2,095,450	+		IAI47_09890	0.49	-0.4
2,095,450	+		IAI47_09890	0.49	-0.3
2,095,450	+		IAI47_09890	0.49	+0.9
2,095,450	+		IAI47_09890	0.49	+1.0
2,095,450	+		IAI47_09890	0.49	-0.1
2,095,450	+		IAI47_09890	0.49	+3.3
2,095,450	+		IAI47_09890	0.49	+0.8
2,095,450	+		IAI47_09890	0.49	+1.1
2,095,451	-		IAI47_09890	0.49	+1.8
2,095,451	-		IAI47_09890	0.49	-0.9
2,095,451	-		IAI47_09890	0.49	-0.2
2,095,555	+		IAI47_09890	0.62	-0.1
2,095,555	+		IAI47_09890	0.62	+1.2
2,095,555	+		IAI47_09890	0.62	+0.2
2,095,555	+		IAI47_09890	0.62	+0.4
2,095,555	+		IAI47_09890	0.62	-1.3
2,095,555	+		IAI47_09890	0.62	+3.3
2,095,555	+		IAI47_09890	0.62	-0.5
2,095,556	-		IAI47_09890	0.62	+1.0
2,095,556	-		IAI47_09890	0.62	+1.3
2,095,556	-		IAI47_09890	0.62	-2.3
2,095,556	-		IAI47_09890	0.62	+0.5
2,095,556	-		IAI47_09890	0.62	+0.3
2,095,556	-		IAI47_09890	0.62	+0.7
2,095,556	-		IAI47_09890	0.62	+0.3
2,095,556	-		IAI47_09890	0.62	-1.3
2,095,556	-		IAI47_09890	0.62	-1.3
2,095,556	-		IAI47_09890	0.62	-0.8
2,095,611	+		IAI47_09890	0.69	+0.5
2,095,678	+		IAI47_09890	0.78	-0.5
2,095,679	-		IAI47_09890	0.78	-0.5
2,095,681	+		IAI47_09890	0.78	+0.7
2,095,681	+		IAI47_09890	0.78	+0.9
2,095,681	+		IAI47_09890	0.78	+0.4
2,095,682	-		IAI47_09890	0.78	-0.2
2,095,682	-		IAI47_09890	0.78	-0.3
2,095,682	-		IAI47_09890	0.78	+2.5
2,095,690	+		IAI47_09890	0.79	+0.4
2,095,690	+		IAI47_09890	0.79	-0.4
2,095,690	+		IAI47_09890	0.79	+2.2
2,095,690	+		IAI47_09890	0.79	-0.1
2,095,691	-		IAI47_09890	0.79	+1.8
2,095,691	-		IAI47_09890	0.79	+2.6
2,095,691	-		IAI47_09890	0.79	-1.5
2,095,691	-		IAI47_09890	0.79	-0.9
2,095,692	+		IAI47_09890	0.79	-0.3
2,095,692	+		IAI47_09890	0.79	-0.6
2,095,692	+		IAI47_09890	0.79	+1.2
2,095,692	+		IAI47_09890	0.79	+0.6
2,095,693	-		IAI47_09890	0.80	+2.6
2,095,693	-		IAI47_09890	0.80	-0.4
2,095,693	-		IAI47_09890	0.80	-0.1
2,095,693	-		IAI47_09890	0.80	+0.1
2,095,693	-		IAI47_09890	0.80	+1.3
2,095,693	-		IAI47_09890	0.80	-0.8
2,095,721	-		IAI47_09890	0.83	+0.6
2,095,750	+		IAI47_09890	0.87	+0.4
2,095,751	-		IAI47_09890	0.87	+0.7
2,095,840	-				-0.1
2,095,875	+				-1.7
2,095,876	-				+0.0
2,095,921	+				+0.8
2,095,921	+				+1.3
2,095,921	+				-0.7
2,095,922	-				-1.7
2,095,922	-				+0.0
2,095,935	-		IAI47_09895	0.12	+0.4
2,095,935	-		IAI47_09895	0.12	-1.4
2,096,048	+		IAI47_09895	0.37	+0.8
2,096,195	+		IAI47_09895	0.71	+1.3
2,096,195	+		IAI47_09895	0.71	-1.5
2,096,196	-		IAI47_09895	0.71	-1.2
2,096,200	+		IAI47_09895	0.72	+0.3
2,096,235	-		IAI47_09895	0.80	+0.6
2,096,248	+		IAI47_09895	0.83	-0.5
2,096,248	+		IAI47_09895	0.83	+0.9
2,096,248	+		IAI47_09895	0.83	-0.5
2,096,249	-		IAI47_09895	0.83	+0.5
2,096,249	-		IAI47_09895	0.83	+0.6
2,096,249	-		IAI47_09895	0.83	-0.4
2,096,249	-		IAI47_09895	0.83	-1.3
2,096,256	+		IAI47_09895	0.85	+0.8
2,096,285	+				+0.2
2,096,285	+				-0.9
2,096,309	+				+1.8
2,096,309	+				-0.3
2,096,309	+				+0.7
2,096,309	+				-1.3
2,096,309	+				+0.0
2,096,310	-				-0.1
2,096,310	-				-0.3
2,096,310	-				-0.7
2,096,335	+				-0.3
2,096,335	+				-0.1
2,096,336	-				-0.4
2,096,393	+				-3.0
2,096,393	+				-1.0
2,096,448	+				+0.1
2,096,462	+				-0.3
2,096,484	+				-0.9
2,096,484	+				+0.7
2,096,502	+				+1.2
2,096,502	+				+0.4
2,096,502	+				+0.9
2,096,502	+				-0.3
2,096,502	+				-1.2
2,096,502	+				-1.5
2,096,502	+				+0.0
2,096,503	-				-0.1
2,096,503	-				+1.7
2,096,503	-				+3.0
2,096,504	+				-0.7
2,096,504	+				+0.5
2,096,504	+				-0.4
2,096,504	+				+1.1
2,096,504	+				+0.1
2,096,504	+				+0.0
2,096,504	+				-1.1
2,096,504	+				+1.1
2,096,504	+				-0.6
2,096,504	+				+1.5
2,096,504	+				-1.1
2,096,505	-				+1.1
2,096,505	-				+0.3
2,096,505	-				+0.4
2,096,505	-				+1.1
2,096,505	-				+0.4
2,096,505	-				-0.5
2,096,505	-				-0.3
2,096,505	-				+1.9
2,096,505	-				-1.6
2,096,514	+				-0.3
2,096,515	-				+2.0
2,096,515	-				+0.7
2,096,602	+		IAI47_09900	0.42	-0.2
2,096,656	+		IAI47_09900	0.63	-1.6
2,096,657	-		IAI47_09900	0.64	-0.6
2,096,657	-		IAI47_09900	0.64	-0.0
2,096,665	-		IAI47_09900	0.67	+0.7
2,096,665	-		IAI47_09900	0.67	+2.3
2,096,744	+				+1.3
2,096,745	-				-0.8
2,096,745	-				+0.5
2,096,745	-				-1.8
2,096,745	-				-0.2
2,096,789	+				+2.2
2,096,827	+				+2.3
2,096,827	+				+0.8
2,096,827	+				-0.5
2,096,827	+				-1.3
2,096,827	+				+0.6
2,096,828	-				-1.6
2,096,828	-				+1.7
2,096,828	-				-1.4