Strain Fitness in Pantoea sp. MT58 around IAI47_13285

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,809,075	+		IAI47_13280	0.55	+0.2
2,809,076	-		IAI47_13280	0.55	-0.9
2,809,114	+		IAI47_13280	0.57	-0.2
2,809,115	-		IAI47_13280	0.57	+1.1
2,809,121	-		IAI47_13280	0.57	+0.3
2,809,121	-		IAI47_13280	0.57	-1.5
2,809,136	+		IAI47_13280	0.58	-0.8
2,809,137	-		IAI47_13280	0.58	+0.9
2,809,207	-		IAI47_13280	0.62	-0.8
2,809,214	+		IAI47_13280	0.63	+0.1
2,809,214	+		IAI47_13280	0.63	-0.6
2,809,215	-		IAI47_13280	0.63	-0.7
2,809,215	-		IAI47_13280	0.63	+1.0
2,809,215	-		IAI47_13280	0.63	-0.9
2,809,215	-		IAI47_13280	0.63	-0.4
2,809,217	-		IAI47_13280	0.63	-0.4
2,809,285	+		IAI47_13280	0.67	-0.2
2,809,287	+		IAI47_13280	0.67	+0.9
2,809,289	+		IAI47_13280	0.67	+0.5
2,809,289	+		IAI47_13280	0.67	+2.0
2,809,289	+		IAI47_13280	0.67	-0.2
2,809,289	+		IAI47_13280	0.67	-0.2
2,809,289	+		IAI47_13280	0.67	+1.6
2,809,289	+		IAI47_13280	0.67	+0.1
2,809,289	+		IAI47_13280	0.67	+1.0
2,809,289	+		IAI47_13280	0.67	+1.5
2,809,289	+		IAI47_13280	0.67	+2.7
2,809,290	-		IAI47_13280	0.67	+0.3
2,809,290	-		IAI47_13280	0.67	+1.0
2,809,290	-		IAI47_13280	0.67	+1.1
2,809,290	-		IAI47_13280	0.67	+2.8
2,809,290	-		IAI47_13280	0.67	+1.0
2,809,290	-		IAI47_13280	0.67	-0.9
2,809,290	-		IAI47_13280	0.67	+1.9
2,809,290	-		IAI47_13280	0.67	-2.9
2,809,290	-		IAI47_13280	0.67	-1.1
2,809,309	+		IAI47_13280	0.68	-0.1
2,809,309	+		IAI47_13280	0.68	-1.3
2,809,310	-		IAI47_13280	0.69	+1.2
2,809,354	+		IAI47_13280	0.71	-0.4
2,809,355	-		IAI47_13280	0.71	+0.3
2,809,355	-		IAI47_13280	0.71	+1.6
2,809,396	+		IAI47_13280	0.74	+0.8
2,809,396	+		IAI47_13280	0.74	-0.4
2,809,396	+		IAI47_13280	0.74	+0.9
2,809,396	+		IAI47_13280	0.74	-0.1
2,809,396	+		IAI47_13280	0.74	+0.3
2,809,397	-		IAI47_13280	0.74	+0.2
2,809,397	-		IAI47_13280	0.74	-0.7
2,809,397	-		IAI47_13280	0.74	+0.6
2,809,397	-		IAI47_13280	0.74	+1.3
2,809,397	-		IAI47_13280	0.74	+0.3
2,809,681	-				-0.1
2,809,734	+				+0.4
2,809,734	+				-1.4
2,809,781	+				+1.1
2,809,782	-				-1.5
2,809,839	-				+0.9
2,809,839	-				-1.2
2,809,847	-				+0.1
2,809,856	+				+0.2
2,809,857	-				-0.9
2,809,931	+				-1.0
2,809,931	+				-0.6
2,809,931	+				+0.0
2,809,931	+				+0.3
2,809,932	-				+0.6
2,809,935	-				-0.5
2,809,935	-				-1.2
2,809,938	+				-0.1
2,809,938	+				-0.7
2,809,938	+				+1.1
2,809,938	+				-0.4
2,809,939	-				+0.4
2,809,939	-				+0.2
2,809,953	+				-0.5
2,809,959	-				+1.0
2,809,959	-				-0.1
2,809,959	-				+0.1
2,809,959	-				-0.7
2,809,960	+				+0.6
2,809,966	+				+0.7
2,809,966	+				+0.2
2,809,966	+				+1.8
2,809,966	+				+1.1
2,809,967	-				+0.7
2,809,967	-				+1.5
2,809,967	-				+0.7
2,809,967	-				-0.1
2,809,967	-				-0.0
2,809,967	-				+0.6
2,809,967	-				+1.2
2,809,970	+				-0.2
2,809,985	+				+1.0
2,809,986	-				-0.2
2,810,008	+				+0.6
2,810,008	+				-0.4
2,810,009	-				-1.4
2,810,009	-				-0.3
2,810,031	+				+1.2
2,810,031	+				-0.3
2,810,032	-				-1.1
2,810,119	+				-0.0
2,810,119	+				+2.2
2,810,119	+				+1.8
2,810,120	-				-0.4
2,810,120	-				+1.2
2,810,120	-				-0.7
2,810,120	-				+0.4
2,810,151	-				-0.4
2,810,151	-				+0.9
2,810,282	+		IAI47_13285	0.20	+0.6
2,810,283	-		IAI47_13285	0.20	-0.3
2,810,360	+		IAI47_13285	0.27	+1.9
2,810,360	+		IAI47_13285	0.27	+1.8
2,810,361	-		IAI47_13285	0.27	+0.6
2,810,406	-		IAI47_13285	0.31	+1.2
2,810,511	+		IAI47_13285	0.40	+0.6
2,810,512	-		IAI47_13285	0.40	+0.9
2,810,512	-		IAI47_13285	0.40	+0.4
2,810,559	-		IAI47_13285	0.44	-1.8
2,810,601	-		IAI47_13285	0.48	+0.8
2,810,601	-		IAI47_13285	0.48	+1.0
2,810,601	-		IAI47_13285	0.48	-0.4
2,810,613	-		IAI47_13285	0.49	+0.2
2,810,751	+		IAI47_13285	0.61	+0.7
2,810,751	+		IAI47_13285	0.61	+0.6
2,810,751	+		IAI47_13285	0.61	-2.0
2,810,752	-		IAI47_13285	0.61	-2.5
2,810,752	-		IAI47_13285	0.61	+0.8
2,810,789	+		IAI47_13285	0.64	+0.2
2,810,789	+		IAI47_13285	0.64	+0.9
2,810,789	+		IAI47_13285	0.64	-0.3
2,810,790	-		IAI47_13285	0.64	+0.4
2,810,790	-		IAI47_13285	0.64	-0.1
2,810,790	-		IAI47_13285	0.64	-1.0
2,810,790	-		IAI47_13285	0.64	-0.8
2,810,790	-		IAI47_13285	0.64	+0.2
2,811,069	+		IAI47_13285	0.88	+1.4
2,811,069	+		IAI47_13285	0.88	-0.3
2,811,069	+		IAI47_13285	0.88	-2.4
2,811,070	-		IAI47_13285	0.88	+1.6
2,811,070	-		IAI47_13285	0.88	+0.9
2,811,112	+				+1.1
2,811,116	+				-0.1
2,811,116	+				-0.6
2,811,116	+				-0.8
2,811,117	-				+0.3
2,811,117	-				+0.9
2,811,126	+				-0.2
2,811,126	+				-2.3
2,811,126	+				-0.7
2,811,447	+		IAI47_13290	0.25	-0.2
2,811,447	+		IAI47_13290	0.25	+0.0
2,811,447	+		IAI47_13290	0.25	-0.1
2,811,447	+		IAI47_13290	0.25	+0.9
2,811,448	-		IAI47_13290	0.25	-1.5
2,811,448	-		IAI47_13290	0.25	+0.1
2,811,448	-		IAI47_13290	0.25	+0.1
2,811,479	+		IAI47_13290	0.28	+1.7
2,811,508	+		IAI47_13290	0.31	-0.0
2,811,557	+		IAI47_13290	0.36	+0.9
2,811,557	+		IAI47_13290	0.36	-1.5
2,811,557	+		IAI47_13290	0.36	+0.4
2,811,557	+		IAI47_13290	0.36	-0.2
2,811,557	+		IAI47_13290	0.36	-0.8
2,811,557	+		IAI47_13290	0.36	+1.1
2,811,558	-		IAI47_13290	0.36	-1.1
2,811,558	-		IAI47_13290	0.36	+0.7
2,811,558	-		IAI47_13290	0.36	+1.4
2,811,630	+		IAI47_13290	0.44	+0.5
2,811,630	+		IAI47_13290	0.44	+0.9
2,811,630	+		IAI47_13290	0.44	-0.2
2,811,630	+		IAI47_13290	0.44	+0.4
2,811,630	+		IAI47_13290	0.44	+0.2
2,811,630	+		IAI47_13290	0.44	-0.0
2,811,630	+		IAI47_13290	0.44	+0.7
2,811,631	-		IAI47_13290	0.44	+1.0
2,811,631	-		IAI47_13290	0.44	-1.0
2,811,631	-		IAI47_13290	0.44	+0.5
2,811,631	-		IAI47_13290	0.44	+0.9
2,811,631	-		IAI47_13290	0.44	-0.1
2,811,631	-		IAI47_13290	0.44	-1.5
2,811,631	-		IAI47_13290	0.44	-0.0
2,811,631	-		IAI47_13290	0.44	+1.1
2,811,706	-		IAI47_13290	0.51	-1.0
2,811,708	+		IAI47_13290	0.52	+0.6
2,811,708	+		IAI47_13290	0.52	+0.1
2,811,708	+		IAI47_13290	0.52	-0.2
2,811,709	-		IAI47_13290	0.52	+0.9
2,811,711	+		IAI47_13290	0.52	-2.0
2,811,711	+		IAI47_13290	0.52	+0.9
2,811,711	+		IAI47_13290	0.52	+0.8
2,811,711	+		IAI47_13290	0.52	-2.1
2,811,711	+		IAI47_13290	0.52	+0.1
2,811,712	-		IAI47_13290	0.52	+0.6
2,811,712	-		IAI47_13290	0.52	-0.4
2,811,712	-		IAI47_13290	0.52	+0.8
2,811,712	-		IAI47_13290	0.52	-2.4
2,811,772	+		IAI47_13290	0.58	-0.3
2,811,772	+		IAI47_13290	0.58	-1.1
2,811,772	+		IAI47_13290	0.58	-0.1
2,811,773	-		IAI47_13290	0.58	-2.5
2,811,773	-		IAI47_13290	0.58	-2.3
2,811,808	-		IAI47_13290	0.62	-0.7
2,811,808	-		IAI47_13290	0.62	-0.6
2,811,835	+		IAI47_13290	0.65	+1.0
2,811,835	+		IAI47_13290	0.65	-1.6
2,811,835	+		IAI47_13290	0.65	-0.7
2,811,835	+		IAI47_13290	0.65	+0.2
2,811,836	-		IAI47_13290	0.65	-1.7
2,811,836	-		IAI47_13290	0.65	-0.2
2,811,836	-		IAI47_13290	0.65	+0.2
2,811,836	-		IAI47_13290	0.65	-0.1
2,811,836	-		IAI47_13290	0.65	-0.0
2,811,836	-		IAI47_13290	0.65	-0.3
2,811,914	+		IAI47_13290	0.73	+0.6
2,811,915	-		IAI47_13290	0.73	+0.5
2,811,915	-		IAI47_13290	0.73	-0.2
2,811,915	-		IAI47_13290	0.73	-0.1
2,811,989	+		IAI47_13290	0.81	-0.2
2,811,989	+		IAI47_13290	0.81	+1.3
2,811,990	-		IAI47_13290	0.81	+0.1
2,811,990	-		IAI47_13290	0.81	-1.1
2,812,027	-		IAI47_13290	0.85	-0.8
2,812,027	-		IAI47_13290	0.85	+0.4
2,812,027	-		IAI47_13290	0.85	-0.1
2,812,027	-		IAI47_13290	0.85	-0.0
2,812,091	+				+0.0
2,812,091	+				-0.8
2,812,092	-				+1.1
2,812,092	-				+1.6
2,812,092	-				-0.4
2,812,155	+				-2.0
2,812,156	-				+0.4
2,812,156	-				+1.4
2,812,164	+				+0.8
2,812,191	+				-0.2
2,812,192	-				-0.9