Strain Fitness in Pantoea sp. MT58 around IAI47_08275

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,749,385	+				-1.3
1,749,385	+				+0.2
1,749,386	-				-0.9
1,749,391	+				+0.8
1,749,391	+				+0.1
1,749,392	-				+1.4
1,749,392	-				-0.7
1,749,413	-				-0.1
1,749,413	-				-0.6
1,749,419	+				-0.2
1,749,419	+				+0.1
1,749,420	-				+0.8
1,749,460	-				-0.6
1,749,496	+				+0.2
1,749,563	-				+1.0
1,749,585	+				+0.6
1,749,585	+				-1.5
1,749,586	-				+2.5
1,749,586	-				-1.7
1,749,606	+				-1.0
1,749,630	-				-0.4
1,749,630	-				+1.0
1,749,643	+				-1.7
1,749,643	+				-0.8
1,749,643	+				+0.9
1,749,644	-				-0.6
1,749,644	-				-0.0
1,749,705	-		IAI47_08270	0.15	-0.3
1,749,708	+		IAI47_08270	0.15	+1.0
1,749,708	+		IAI47_08270	0.15	+0.9
1,749,708	+		IAI47_08270	0.15	-0.6
1,749,708	+		IAI47_08270	0.15	-1.3
1,749,791	+		IAI47_08270	0.26	+0.4
1,749,791	+		IAI47_08270	0.26	-0.4
1,749,791	+		IAI47_08270	0.26	+0.1
1,749,791	+		IAI47_08270	0.26	-0.1
1,749,791	+		IAI47_08270	0.26	-0.2
1,749,792	-		IAI47_08270	0.26	-0.0
1,749,874	-		IAI47_08270	0.36	+0.8
1,749,998	-		IAI47_08270	0.52	-0.4
1,750,052	+		IAI47_08270	0.59	-1.8
1,750,052	+		IAI47_08270	0.59	-1.9
1,750,053	-		IAI47_08270	0.59	+1.0
1,750,053	-		IAI47_08270	0.59	+0.7
1,750,097	+		IAI47_08270	0.64	+0.8
1,750,123	-		IAI47_08270	0.68	-0.9
1,750,146	+		IAI47_08270	0.71	-0.4
1,750,146	+		IAI47_08270	0.71	-0.5
1,750,146	+		IAI47_08270	0.71	-0.7
1,750,147	-		IAI47_08270	0.71	+0.6
1,750,173	+		IAI47_08270	0.74	-1.0
1,750,173	+		IAI47_08270	0.74	-1.5
1,750,185	+		IAI47_08270	0.76	+0.1
1,750,290	-		IAI47_08270	0.89	-1.2
1,750,331	+				-0.2
1,750,331	+				+0.4
1,750,331	+				+0.8
1,750,331	+				-0.2
1,750,332	-				-0.5
1,750,334	+				-0.4
1,750,334	+				-0.2
1,750,334	+				+0.4
1,750,335	-				-0.8
1,750,335	-				+0.4
1,750,335	-				+0.6
1,750,337	+				-0.5
1,750,337	+				+1.0
1,750,337	+				-0.9
1,750,338	-				-2.2
1,750,338	-				+0.9
1,750,340	+				-0.4
1,750,340	+				+0.4
1,750,368	+				+1.3
1,750,369	-				+1.7
1,750,373	+				-0.5
1,750,373	+				+0.0
1,750,373	+				+1.4
1,750,373	+				-1.0
1,750,385	-				+2.6
1,750,385	-				+1.3
1,750,397	+				-0.6
1,750,451	-				-1.0
1,750,451	-				-0.0
1,750,534	+		IAI47_08275	0.11	-0.0
1,750,535	-		IAI47_08275	0.11	+1.2
1,750,565	+		IAI47_08275	0.13	+0.4
1,750,566	-		IAI47_08275	0.13	+0.8
1,750,572	+		IAI47_08275	0.14	+0.2
1,750,572	+		IAI47_08275	0.14	+1.1
1,750,573	-		IAI47_08275	0.14	+0.0
1,750,573	-		IAI47_08275	0.14	+0.7
1,750,573	-		IAI47_08275	0.14	+0.5
1,750,611	+		IAI47_08275	0.16	-0.3
1,750,612	-		IAI47_08275	0.17	-1.3
1,750,614	+		IAI47_08275	0.17	+0.2
1,750,614	+		IAI47_08275	0.17	-0.3
1,750,614	+		IAI47_08275	0.17	+2.7
1,750,614	+		IAI47_08275	0.17	-1.8
1,750,615	-		IAI47_08275	0.17	+2.4
1,750,615	-		IAI47_08275	0.17	+0.7
1,750,631	+		IAI47_08275	0.18	-3.2
1,750,631	+		IAI47_08275	0.18	-1.0
1,750,631	+		IAI47_08275	0.18	-1.6
1,750,631	+		IAI47_08275	0.18	+0.4
1,750,631	+		IAI47_08275	0.18	-0.7
1,750,632	-		IAI47_08275	0.18	-0.3
1,750,657	-		IAI47_08275	0.20	+0.2
1,750,701	+		IAI47_08275	0.23	+2.0
1,750,701	+		IAI47_08275	0.23	-1.8
1,750,701	+		IAI47_08275	0.23	-1.1
1,750,702	-		IAI47_08275	0.23	-0.8
1,750,761	-		IAI47_08275	0.27	+2.4
1,750,761	-		IAI47_08275	0.27	+0.1
1,750,779	+		IAI47_08275	0.28	-0.5
1,750,790	-		IAI47_08275	0.29	+0.3
1,750,850	+		IAI47_08275	0.33	+2.0
1,750,850	+		IAI47_08275	0.33	+0.3
1,750,850	+		IAI47_08275	0.33	+0.4
1,750,850	+		IAI47_08275	0.33	-1.3
1,750,878	-		IAI47_08275	0.35	-0.9
1,750,923	+		IAI47_08275	0.38	-0.3
1,750,923	+		IAI47_08275	0.38	-0.3
1,750,923	+		IAI47_08275	0.38	+0.5
1,750,923	+		IAI47_08275	0.38	-0.2
1,750,923	+		IAI47_08275	0.38	+0.5
1,750,924	-		IAI47_08275	0.38	+0.2
1,750,924	-		IAI47_08275	0.38	+0.4
1,750,924	-		IAI47_08275	0.38	-0.8
1,750,996	+		IAI47_08275	0.43	+0.2
1,750,996	+		IAI47_08275	0.43	-1.1
1,750,997	-		IAI47_08275	0.43	+0.8
1,750,997	-		IAI47_08275	0.43	-1.5
1,751,003	+		IAI47_08275	0.44	+2.8
1,751,004	-		IAI47_08275	0.44	-0.2
1,751,004	-		IAI47_08275	0.44	+1.3
1,751,042	+		IAI47_08275	0.46	+0.3
1,751,042	+		IAI47_08275	0.46	+0.2
1,751,042	+		IAI47_08275	0.46	+2.1
1,751,042	+		IAI47_08275	0.46	+0.0
1,751,056	-		IAI47_08275	0.47	+0.4
1,751,084	+		IAI47_08275	0.49	-0.1
1,751,084	+		IAI47_08275	0.49	+0.1
1,751,084	+		IAI47_08275	0.49	-0.9
1,751,084	+		IAI47_08275	0.49	+2.4
1,751,084	+		IAI47_08275	0.49	+1.0
1,751,085	-		IAI47_08275	0.49	+0.1
1,751,085	-		IAI47_08275	0.49	+1.6
1,751,214	+		IAI47_08275	0.58	-1.2
1,751,214	+		IAI47_08275	0.58	-0.5
1,751,214	+		IAI47_08275	0.58	-0.4
1,751,214	+		IAI47_08275	0.58	-0.1
1,751,214	+		IAI47_08275	0.58	+2.4
1,751,214	+		IAI47_08275	0.58	+1.0
1,751,215	-		IAI47_08275	0.59	+0.3
1,751,215	-		IAI47_08275	0.59	-0.2
1,751,304	+		IAI47_08275	0.65	+1.4
1,751,355	-		IAI47_08275	0.68	+0.4
1,751,358	+		IAI47_08275	0.68	-0.5
1,751,358	+		IAI47_08275	0.68	+1.2
1,751,358	+		IAI47_08275	0.68	+0.5
1,751,359	-		IAI47_08275	0.69	-2.4
1,751,359	-		IAI47_08275	0.69	+0.1
1,751,359	-		IAI47_08275	0.69	-0.4
1,751,359	-		IAI47_08275	0.69	+1.0
1,751,385	+		IAI47_08275	0.70	+0.5
1,751,386	-		IAI47_08275	0.70	+2.2
1,751,386	-		IAI47_08275	0.70	+1.0
1,751,388	+		IAI47_08275	0.71	-0.6
1,751,388	+		IAI47_08275	0.71	+0.4
1,751,389	-		IAI47_08275	0.71	-0.8
1,751,389	-		IAI47_08275	0.71	-1.1
1,751,389	-		IAI47_08275	0.71	-1.4
1,751,394	-		IAI47_08275	0.71	+3.6
1,751,394	-		IAI47_08275	0.71	+0.7
1,751,496	+		IAI47_08275	0.78	+0.7
1,751,496	+		IAI47_08275	0.78	-0.2
1,751,496	+		IAI47_08275	0.78	+0.5
1,751,497	-		IAI47_08275	0.78	+0.3
1,751,497	-		IAI47_08275	0.78	+0.8
1,751,497	-		IAI47_08275	0.78	+1.4
1,751,497	-		IAI47_08275	0.78	-0.9
1,751,497	-		IAI47_08275	0.78	-0.9
1,751,497	-		IAI47_08275	0.78	+0.1
1,751,531	-		IAI47_08275	0.81	+0.5
1,751,584	+		IAI47_08275	0.84	-0.1
1,751,584	+		IAI47_08275	0.84	+0.2
1,751,584	+		IAI47_08275	0.84	+0.0
1,751,585	-		IAI47_08275	0.84	+1.1
1,751,595	+		IAI47_08275	0.85	+0.5
1,751,596	-		IAI47_08275	0.85	-1.5
1,751,636	+		IAI47_08275	0.88	+1.0
1,751,667	+				-0.2
1,751,667	+				-0.1
1,751,668	-				+0.2
1,751,693	+				-0.9
1,751,693	+				-0.1
1,751,694	-				+0.9
1,751,702	+				-0.7
1,751,702	+				+1.0
1,751,705	+				+0.0
1,751,706	-				-0.8
1,751,756	+				+1.5
1,751,756	+				-1.5
1,751,756	+				+0.6
1,751,756	+				+0.6
1,751,756	+				+0.3
1,751,757	-				+0.4
1,751,757	-				+0.8
1,751,757	-				+1.1
1,751,768	+				-0.6
1,751,768	+				-1.4
1,751,769	-				+1.9
1,751,769	-				+0.3
1,751,769	-				+0.1
1,751,769	-				+0.8
1,751,824	+				+1.3
1,751,825	-				-0.6
1,751,825	-				+0.3
1,751,832	+				+0.6
1,751,832	+				+0.5
1,751,833	-				-0.8
1,751,833	-				-0.8
1,751,833	-				+1.1
1,751,833	-				-1.0
1,751,844	+				+0.8
1,751,844	+				-0.2
1,751,844	+				-0.3
1,751,845	-				-1.7
1,751,845	-				-1.6
1,751,845	-				+2.9
1,751,909	+				-1.9
1,751,910	-				+1.1
1,751,918	+				-0.5
1,751,918	+				+1.4
1,751,918	+				+1.4
1,751,918	+				+1.2
1,751,918	+				+0.2
1,751,919	-				+0.4
1,751,919	-				-1.4
1,751,919	-				-0.5
1,751,925	+				-0.2
1,751,925	+				-1.5
1,751,925	+				+1.0
1,751,925	+				+0.9
1,751,926	-				-0.5
1,751,926	-				-0.2
1,751,936	+				-1.3
1,751,952	+				+1.3
1,751,953	-				-0.8
1,752,040	+				+1.0
1,752,040	+				+1.4
1,752,040	+				+1.8
1,752,041	-				+0.9
1,752,045	-				+2.2
1,752,045	-				-0.2
1,752,045	-				-1.0
1,752,045	-				-0.2
1,752,053	+				-0.6
1,752,087	-				+1.1
1,752,087	-				-1.4
1,752,097	+				+1.0
1,752,098	-				+1.9
1,752,098	-				-0.8
1,752,098	-				+1.9
1,752,098	-				+0.8
1,752,098	-				+0.8
1,752,100	-				+1.4
1,752,128	+				-0.2
1,752,129	-				-0.2
1,752,133	-				-0.6
1,752,143	+				-1.0
1,752,143	+				+1.0
1,752,143	+				+0.2
1,752,144	-				-0.9
1,752,152	+				+0.2
1,752,219	+				+0.2
1,752,219	+				-1.4
1,752,242	+				+1.3
1,752,243	-				+1.1
1,752,277	-				+1.1
1,752,343	+				-0.7
1,752,344	-				-1.3
1,752,344	-				+0.1
1,752,344	-				-2.4
1,752,401	-				+0.1
1,752,401	-				-0.9
1,752,419	+				+0.1
1,752,423	-				+0.2
1,752,449	+				+2.0
1,752,449	+				-1.2
1,752,576	+				-1.2
1,752,576	+				-1.0
1,752,576	+				-0.3
1,752,576	+				+0.8
1,752,577	-				-0.5
1,752,577	-				-0.5
1,752,577	-				-1.0
1,752,577	-				-0.1
1,752,594	+				-0.2
1,752,594	+				-1.0
1,752,595	-				-1.1
1,752,596	+				-0.7
1,752,596	+				-1.1
1,752,597	-				-0.3
1,752,597	-				+0.2
1,752,633	+				+1.7
1,752,634	-				-1.4
1,752,634	-				-1.4
1,752,671	-				-0.4
1,752,742	+				-0.4
1,752,742	+				+0.7
1,752,742	+				-1.1
1,752,742	+				-0.6
1,752,743	-				+0.7
1,752,743	-				-0.3
1,752,743	-				-2.0
1,752,743	-				-0.2
1,752,743	-				-1.4
1,752,746	+				+0.2
1,752,746	+				+0.2
1,752,746	+				-0.4
1,752,746	+				+0.7
1,752,746	+				-0.2
1,752,746	+				+0.9
1,752,746	+				+0.1
1,752,747	-				-0.0
1,752,747	-				-2.2
1,752,747	-				-0.6
1,752,747	-				-0.7
1,752,749	-				-1.1
1,752,749	-				-0.5