Strain Fitness in Pantoea sp. MT58 around IAI47_05345

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,130,605	+				-0.2
1,130,606	-				+0.8
1,130,606	-				+0.0
1,130,641	+		IAI47_05340	0.12	-0.1
1,130,641	+		IAI47_05340	0.12	+0.4
1,130,642	-		IAI47_05340	0.13	+0.7
1,130,713	+		IAI47_05340	0.19	-1.3
1,130,713	+		IAI47_05340	0.19	-1.5
1,130,714	-		IAI47_05340	0.19	-1.0
1,130,721	-		IAI47_05340	0.20	-0.5
1,130,721	-		IAI47_05340	0.20	+0.7
1,130,732	+		IAI47_05340	0.21	-0.4
1,130,732	+		IAI47_05340	0.21	+0.8
1,130,732	+		IAI47_05340	0.21	+1.2
1,130,733	-		IAI47_05340	0.21	-0.1
1,130,733	-		IAI47_05340	0.21	-0.8
1,130,733	-		IAI47_05340	0.21	-1.6
1,130,768	-		IAI47_05340	0.24	-0.7
1,130,795	-		IAI47_05340	0.27	+1.2
1,130,795	-		IAI47_05340	0.27	+0.3
1,130,795	-		IAI47_05340	0.27	-0.8
1,130,820	+		IAI47_05340	0.29	-0.2
1,130,821	-		IAI47_05340	0.29	-0.2
1,130,821	-		IAI47_05340	0.29	-0.9
1,130,821	-		IAI47_05340	0.29	+0.9
1,130,821	-		IAI47_05340	0.29	+0.2
1,130,821	-		IAI47_05340	0.29	+1.3
1,130,848	+		IAI47_05340	0.32	+0.2
1,130,848	+		IAI47_05340	0.32	+0.9
1,130,848	+		IAI47_05340	0.32	-0.3
1,130,848	+		IAI47_05340	0.32	-0.3
1,130,848	+		IAI47_05340	0.32	-0.3
1,130,848	+		IAI47_05340	0.32	-1.2
1,130,849	-		IAI47_05340	0.32	+1.0
1,130,849	-		IAI47_05340	0.32	-0.6
1,130,849	-		IAI47_05340	0.32	+0.1
1,130,849	-		IAI47_05340	0.32	-0.2
1,130,849	-		IAI47_05340	0.32	-1.3
1,130,849	-		IAI47_05340	0.32	-0.6
1,130,859	+		IAI47_05340	0.33	+0.3
1,131,125	+		IAI47_05340	0.58	-0.3
1,131,125	+		IAI47_05340	0.58	-1.5
1,131,146	-		IAI47_05340	0.59	-0.1
1,131,245	+		IAI47_05340	0.69	+0.2
1,131,245	+		IAI47_05340	0.69	-0.7
1,131,245	+		IAI47_05340	0.69	+0.1
1,131,245	+		IAI47_05340	0.69	-0.2
1,131,245	+		IAI47_05340	0.69	+0.9
1,131,246	-		IAI47_05340	0.69	+0.3
1,131,246	-		IAI47_05340	0.69	-1.5
1,131,246	-		IAI47_05340	0.69	+0.4
1,131,246	-		IAI47_05340	0.69	-0.2
1,131,246	-		IAI47_05340	0.69	-1.6
1,131,246	-		IAI47_05340	0.69	-0.3
1,131,247	+		IAI47_05340	0.69	-2.0
1,131,247	+		IAI47_05340	0.69	+0.8
1,131,248	-		IAI47_05340	0.69	-1.2
1,131,290	+		IAI47_05340	0.73	+0.8
1,131,290	+		IAI47_05340	0.73	+0.3
1,131,290	+		IAI47_05340	0.73	+0.1
1,131,290	+		IAI47_05340	0.73	-1.7
1,131,290	+		IAI47_05340	0.73	+1.3
1,131,290	+		IAI47_05340	0.73	-2.2
1,131,290	+		IAI47_05340	0.73	+0.8
1,131,290	+		IAI47_05340	0.73	-0.4
1,131,290	+		IAI47_05340	0.73	+2.3
1,131,290	+		IAI47_05340	0.73	+0.1
1,131,291	-		IAI47_05340	0.73	+0.3
1,131,291	-		IAI47_05340	0.73	-0.3
1,131,291	-		IAI47_05340	0.73	-0.2
1,131,304	+		IAI47_05340	0.74	-1.9
1,131,304	+		IAI47_05340	0.74	+0.6
1,131,304	+		IAI47_05340	0.74	-0.3
1,131,304	+		IAI47_05340	0.74	-1.0
1,131,305	-		IAI47_05340	0.74	+0.2
1,131,307	+		IAI47_05340	0.74	-1.3
1,131,307	+		IAI47_05340	0.74	-1.4
1,131,308	-		IAI47_05340	0.75	-0.9
1,131,308	-		IAI47_05340	0.75	+0.1
1,131,308	-		IAI47_05340	0.75	-1.0
1,131,308	-		IAI47_05340	0.75	+0.3
1,131,313	-		IAI47_05340	0.75	-1.1
1,131,313	-		IAI47_05340	0.75	+0.9
1,131,313	-		IAI47_05340	0.75	+0.2
1,131,364	+		IAI47_05340	0.80	-0.1
1,131,365	-		IAI47_05340	0.80	+0.1
1,131,374	+		IAI47_05340	0.81	-1.7
1,131,374	+		IAI47_05340	0.81	-0.5
1,131,375	-		IAI47_05340	0.81	-0.6
1,131,398	+		IAI47_05340	0.83	-0.9
1,131,398	+		IAI47_05340	0.83	-0.4
1,131,399	-		IAI47_05340	0.83	-1.6
1,131,399	-		IAI47_05340	0.83	-0.8
1,131,399	-		IAI47_05340	0.83	+0.2
1,131,399	-		IAI47_05340	0.83	+0.3
1,131,410	-		IAI47_05340	0.84	+0.2
1,131,567	+				-1.6
1,131,567	+				+1.1
1,131,567	+				-0.9
1,131,567	+				-1.8
1,131,567	+				-0.2
1,131,567	-				+0.1
1,131,568	-				+0.1
1,131,568	-				+0.6
1,131,639	+				-0.1
1,131,639	+				-1.1
1,131,640	-				-0.5
1,131,640	-				-1.0
1,131,640	-				+0.8
1,131,640	-				+1.1
1,131,666	+				+1.5
1,131,667	-				-1.2
1,131,714	+		IAI47_05345	0.12	-0.1
1,131,714	+		IAI47_05345	0.12	-0.6
1,131,714	+		IAI47_05345	0.12	+0.8
1,131,714	+		IAI47_05345	0.12	-1.1
1,131,715	-		IAI47_05345	0.12	-1.5
1,131,715	-		IAI47_05345	0.12	-0.3
1,131,715	-		IAI47_05345	0.12	-0.1
1,131,715	-		IAI47_05345	0.12	+0.0
1,131,735	+		IAI47_05345	0.14	-2.0
1,131,736	-		IAI47_05345	0.14	-0.3
1,131,737	+		IAI47_05345	0.14	+0.5
1,131,737	+		IAI47_05345	0.14	+0.1
1,131,737	+		IAI47_05345	0.14	-0.5
1,131,737	+		IAI47_05345	0.14	-1.2
1,131,737	+		IAI47_05345	0.14	+1.0
1,131,737	+		IAI47_05345	0.14	+0.4
1,131,737	+		IAI47_05345	0.14	+2.0
1,131,737	+		IAI47_05345	0.14	+0.2
1,131,737	+		IAI47_05345	0.14	-0.7
1,131,738	-		IAI47_05345	0.14	-0.3
1,131,738	-		IAI47_05345	0.14	+0.1
1,131,738	-		IAI47_05345	0.14	-2.0
1,131,738	-		IAI47_05345	0.14	+1.1
1,131,738	-		IAI47_05345	0.14	-1.2
1,131,738	-		IAI47_05345	0.14	-0.0
1,131,738	-		IAI47_05345	0.14	+1.1
1,131,738	-		IAI47_05345	0.14	+0.2
1,131,738	-		IAI47_05345	0.14	+0.4
1,131,738	-		IAI47_05345	0.14	+2.6
1,131,738	-		IAI47_05345	0.14	-0.3
1,131,738	-		IAI47_05345	0.14	-1.6
1,131,738	-		IAI47_05345	0.14	+0.2
1,131,738	-		IAI47_05345	0.14	-1.1
1,131,774	+		IAI47_05345	0.17	+0.2
1,131,774	+		IAI47_05345	0.17	-1.5
1,131,775	-		IAI47_05345	0.17	-1.6
1,131,804	+		IAI47_05345	0.20	+2.4
1,131,806	+		IAI47_05345	0.20	-1.0
1,131,806	+		IAI47_05345	0.20	+0.0
1,131,806	+		IAI47_05345	0.20	-0.3
1,131,806	+		IAI47_05345	0.20	+0.4
1,131,806	+		IAI47_05345	0.20	-0.1
1,131,806	+		IAI47_05345	0.20	-0.2
1,131,806	+		IAI47_05345	0.20	+0.2
1,131,806	+		IAI47_05345	0.20	+1.7
1,131,806	+		IAI47_05345	0.20	+1.3
1,131,806	+		IAI47_05345	0.20	-0.6
1,131,806	+		IAI47_05345	0.20	-0.6
1,131,806	+		IAI47_05345	0.20	+1.1
1,131,806	+		IAI47_05345	0.20	+0.5
1,131,806	+		IAI47_05345	0.20	-0.8
1,131,807	-		IAI47_05345	0.20	-1.2
1,131,807	-		IAI47_05345	0.20	+0.5
1,131,807	-		IAI47_05345	0.20	+0.2
1,131,807	-		IAI47_05345	0.20	+0.3
1,131,807	-		IAI47_05345	0.20	+0.3
1,131,807	-		IAI47_05345	0.20	+0.5
1,131,807	-		IAI47_05345	0.20	+0.2
1,131,807	-		IAI47_05345	0.20	+0.6
1,131,820	-		IAI47_05345	0.21	+1.6
1,131,837	+		IAI47_05345	0.22	-2.2
1,131,884	+		IAI47_05345	0.26	+0.2
1,131,884	+		IAI47_05345	0.26	+0.3
1,131,885	-		IAI47_05345	0.26	+0.7
1,131,929	-		IAI47_05345	0.30	-1.0
1,131,939	+		IAI47_05345	0.31	-0.6
1,131,939	+		IAI47_05345	0.31	-1.1
1,131,940	-		IAI47_05345	0.31	-1.1
1,131,940	-		IAI47_05345	0.31	-0.7
1,131,967	-		IAI47_05345	0.34	-0.5
1,131,984	-		IAI47_05345	0.35	-1.3
1,132,017	+		IAI47_05345	0.38	+0.7
1,132,017	+		IAI47_05345	0.38	+1.2
1,132,017	+		IAI47_05345	0.38	+0.1
1,132,017	+		IAI47_05345	0.38	+2.2
1,132,017	+		IAI47_05345	0.38	+1.6
1,132,018	-		IAI47_05345	0.38	-0.1
1,132,018	-		IAI47_05345	0.38	+0.4
1,132,020	+		IAI47_05345	0.38	+0.1
1,132,020	+		IAI47_05345	0.38	-0.8
1,132,020	+		IAI47_05345	0.38	+0.1
1,132,021	-		IAI47_05345	0.38	-0.1
1,132,021	-		IAI47_05345	0.38	+0.3
1,132,080	+		IAI47_05345	0.43	+0.2
1,132,081	-		IAI47_05345	0.43	+0.6
1,132,081	-		IAI47_05345	0.43	+0.2
1,132,115	-		IAI47_05345	0.46	+1.9
1,132,185	-		IAI47_05345	0.52	+0.4
1,132,199	+		IAI47_05345	0.53	+1.5
1,132,200	-		IAI47_05345	0.54	+1.5
1,132,227	+		IAI47_05345	0.56	-2.3
1,132,227	+		IAI47_05345	0.56	-0.4
1,132,227	+		IAI47_05345	0.56	-0.0
1,132,227	+		IAI47_05345	0.56	+1.0
1,132,227	+		IAI47_05345	0.56	+1.1
1,132,228	-		IAI47_05345	0.56	+1.3
1,132,228	-		IAI47_05345	0.56	-0.0
1,132,228	-		IAI47_05345	0.56	-1.9
1,132,348	-		IAI47_05345	0.66	-0.4
1,132,359	+		IAI47_05345	0.67	+1.9
1,132,360	-		IAI47_05345	0.67	+0.3
1,132,360	-		IAI47_05345	0.67	-0.6
1,132,371	+		IAI47_05345	0.68	+0.1
1,132,373	+		IAI47_05345	0.68	-1.9
1,132,373	+		IAI47_05345	0.68	+0.5
1,132,373	+		IAI47_05345	0.68	+2.4
1,132,373	+		IAI47_05345	0.68	+0.1
1,132,374	-		IAI47_05345	0.68	-1.7
1,132,374	-		IAI47_05345	0.68	-0.6
1,132,374	-		IAI47_05345	0.68	+1.9
1,132,374	-		IAI47_05345	0.68	-1.1
1,132,374	-		IAI47_05345	0.68	-0.1
1,132,374	-		IAI47_05345	0.68	-0.3
1,132,374	-		IAI47_05345	0.68	+1.3
1,132,374	-		IAI47_05345	0.68	-1.3
1,132,374	-		IAI47_05345	0.68	-1.9
1,132,374	-		IAI47_05345	0.68	-0.1
1,132,374	-		IAI47_05345	0.68	+0.7
1,132,374	-		IAI47_05345	0.68	-0.2
1,132,374	-		IAI47_05345	0.68	-1.5
1,132,374	-		IAI47_05345	0.68	+1.6
1,132,403	+		IAI47_05345	0.71	-1.6
1,132,403	+		IAI47_05345	0.71	+1.0
1,132,403	+		IAI47_05345	0.71	-0.4
1,132,404	-		IAI47_05345	0.71	-0.2
1,132,404	-		IAI47_05345	0.71	+0.4
1,132,404	-		IAI47_05345	0.71	-1.3
1,132,404	-		IAI47_05345	0.71	-0.6
1,132,404	-		IAI47_05345	0.71	-0.0
1,132,407	+		IAI47_05345	0.71	+0.8
1,132,407	+		IAI47_05345	0.71	-0.1
1,132,407	+		IAI47_05345	0.71	+0.2
1,132,408	-		IAI47_05345	0.71	+1.9
1,132,408	-		IAI47_05345	0.71	+1.1
1,132,408	-		IAI47_05345	0.71	-1.2
1,132,579	+		IAI47_05345	0.86	+0.1
1,132,579	+		IAI47_05345	0.86	-0.4
1,132,579	+		IAI47_05345	0.86	+1.2
1,132,579	+		IAI47_05345	0.86	+0.6
1,132,579	+		IAI47_05345	0.86	-0.1
1,132,579	+		IAI47_05345	0.86	+0.9
1,132,579	+		IAI47_05345	0.86	+0.1
1,132,579	+		IAI47_05345	0.86	-0.2
1,132,580	-		IAI47_05345	0.86	+0.5
1,132,580	-		IAI47_05345	0.86	-0.1
1,132,580	-		IAI47_05345	0.86	-1.0
1,132,616	+		IAI47_05345	0.89	+0.0
1,132,616	+		IAI47_05345	0.89	+0.4
1,132,624	-				+0.2
1,132,634	+				-0.2
1,132,634	+				+1.4
1,132,635	-				+0.0
1,132,693	+				+0.9
1,132,693	+				+0.8
1,132,694	-				+0.0
1,132,723	+				-0.6
1,132,724	-				-0.3
1,132,727	+				-0.1
1,132,727	+				+1.7
1,132,727	+				-0.9
1,132,727	+				-1.3
1,132,727	+				-0.1
1,132,728	-				+0.0
1,132,728	-				+1.0
1,132,728	-				-0.0
1,132,728	-				-0.6
1,132,728	-				-0.5
1,132,728	-				-0.7
1,132,728	-				-0.2
1,132,734	+				+1.4
1,132,734	+				+0.4
1,132,734	+				+0.7
1,132,734	+				-0.4
1,132,734	+				-1.0
1,132,734	+				+0.5
1,132,734	+				-0.2
1,132,734	+				-1.1
1,132,734	+				-2.2
1,132,734	+				-0.2
1,132,734	+				-0.1
1,132,734	+				+1.1
1,132,734	+				-0.1
1,132,735	-				-0.2
1,132,735	-				+1.9
1,132,735	-				-1.9
1,132,735	-				+1.5
1,132,735	-				-0.8
1,132,735	-				+0.6
1,132,735	-				+0.1
1,132,735	-				+1.2
1,132,735	-				+0.2
1,132,735	-				+0.3
1,132,762	+				+0.7
1,132,764	+				-0.5
1,132,764	+				+0.8
1,132,764	+				+1.3
1,132,764	+				-0.8
1,132,764	+				+4.6
1,132,764	+				+0.5
1,132,764	+				+1.7
1,132,764	+				-1.5
1,132,764	+				+3.2
1,132,764	+				-0.9
1,132,765	-				-1.2
1,132,765	-				-0.3
1,132,765	-				-1.3
1,132,765	-				+0.5
1,132,765	-				+0.9
1,132,765	-				-1.6
1,132,765	-				-1.4
1,132,765	-				+0.4
1,132,765	-				+1.2
1,132,768	+				+2.0
1,132,768	+				-0.4
1,132,768	+				+1.5
1,132,769	-				+0.4
1,132,865	+				-1.2
1,132,865	+				-0.5
1,132,865	+				+0.6
1,132,865	+				-0.2
1,132,865	+				-0.4
1,132,865	+				-0.1
1,132,865	+				-1.5
1,132,893	-				+0.8
1,132,893	-				+1.4
1,132,893	-				-0.6
1,132,893	-				+0.4
1,132,893	-				+0.3
1,132,893	-				+0.9
1,132,894	+				-0.2
1,132,894	+				+0.5
1,132,894	+				+0.7
1,132,894	+				-1.6
1,132,894	+				+0.6
1,132,894	+				+0.4
1,132,894	+				-1.4
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