Strain Fitness in Pantoea sp. MT58 around IAI47_16495

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,493,861	+		IAI47_16485	0.77	-2.1
3,493,861	+		IAI47_16485	0.77	-0.4
3,493,861	+		IAI47_16485	0.77	-0.0
3,493,861	+		IAI47_16485	0.77	+1.6
3,493,861	+		IAI47_16485	0.77	-1.2
3,493,862	-		IAI47_16485	0.77	-0.0
3,493,897	+		IAI47_16485	0.79	+0.6
3,493,897	+		IAI47_16485	0.79	-0.1
3,493,897	+		IAI47_16485	0.79	+1.8
3,493,897	+		IAI47_16485	0.79	-0.6
3,493,898	-		IAI47_16485	0.79	-0.9
3,493,912	-		IAI47_16485	0.80	+0.2
3,493,912	-		IAI47_16485	0.80	-0.9
3,493,943	+		IAI47_16485	0.82	+0.3
3,493,943	+		IAI47_16485	0.82	-0.1
3,493,944	-		IAI47_16485	0.82	+2.1
3,493,952	+		IAI47_16485	0.83	+1.0
3,494,058	+		IAI47_16485	0.90	-0.4
3,494,140	+				+0.8
3,494,140	+				+0.7
3,494,170	-				-0.1
3,494,209	-				-1.4
3,494,212	+				-0.2
3,494,213	-				+0.7
3,494,226	+				+0.3
3,494,226	+				+0.7
3,494,227	-				-1.5
3,494,227	-				-0.6
3,494,227	-				+0.6
3,494,250	+				+1.2
3,494,251	-				+0.1
3,494,313	+		IAI47_16490	0.18	+0.7
3,494,386	+		IAI47_16490	0.33	-0.9
3,494,386	+		IAI47_16490	0.33	-2.1
3,494,386	+		IAI47_16490	0.33	-0.5
3,494,386	+		IAI47_16490	0.33	-2.1
3,494,386	+		IAI47_16490	0.33	-0.1
3,494,387	-		IAI47_16490	0.33	-0.9
3,494,387	-		IAI47_16490	0.33	+0.4
3,494,387	-		IAI47_16490	0.33	-0.1
3,494,402	+		IAI47_16490	0.36	-1.2
3,494,445	+		IAI47_16490	0.45	-1.0
3,494,568	+		IAI47_16490	0.71	-1.9
3,494,603	+		IAI47_16490	0.79	+2.9
3,494,603	+		IAI47_16490	0.79	-1.0
3,494,642	+		IAI47_16490	0.87	+0.2
3,494,643	-		IAI47_16490	0.87	-2.0
3,494,643	-		IAI47_16490	0.87	+0.1
3,494,678	+				+1.2
3,494,679	-				-0.6
3,494,705	+				+0.1
3,494,719	+				-2.1
3,494,719	+				-0.9
3,494,720	-				-1.5
3,494,720	-				+0.2
3,494,737	-				-0.1
3,494,737	-				+3.3
3,494,745	-				+1.4
3,494,756	+				-0.9
3,494,757	-				-2.8
3,494,757	-				-0.1
3,494,811	+				+1.0
3,494,812	-				-1.2
3,494,820	+				-1.4
3,494,841	+				+0.4
3,494,842	-				-1.6
3,494,842	-				+0.7
3,494,861	-				-0.6
3,494,861	-				-0.6
3,494,874	+				-0.0
3,494,912	+				-0.3
3,494,915	+				-1.0
3,494,949	+				+2.1
3,494,968	-		IAI47_16495	0.11	+2.4
3,494,990	+		IAI47_16495	0.12	+1.0
3,494,991	-		IAI47_16495	0.13	-0.8
3,494,991	-		IAI47_16495	0.13	-1.1
3,495,090	-		IAI47_16495	0.20	+1.3
3,495,214	+		IAI47_16495	0.28	+1.8
3,495,214	+		IAI47_16495	0.28	-0.9
3,495,214	+		IAI47_16495	0.28	-0.2
3,495,214	+		IAI47_16495	0.28	-0.1
3,495,215	-		IAI47_16495	0.28	-1.5
3,495,215	-		IAI47_16495	0.28	-0.3
3,495,215	-		IAI47_16495	0.28	-1.1
3,495,215	-		IAI47_16495	0.28	+0.3
3,495,236	+		IAI47_16495	0.30	-0.2
3,495,236	+		IAI47_16495	0.30	-0.3
3,495,236	+		IAI47_16495	0.30	+1.2
3,495,237	-		IAI47_16495	0.30	-2.8
3,495,304	-		IAI47_16495	0.35	+0.5
3,495,423	+		IAI47_16495	0.43	+0.2
3,495,423	+		IAI47_16495	0.43	-0.5
3,495,529	+		IAI47_16495	0.50	+0.9
3,495,529	+		IAI47_16495	0.50	-0.3
3,495,529	+		IAI47_16495	0.50	+1.0
3,495,529	+		IAI47_16495	0.50	-0.9
3,495,530	-		IAI47_16495	0.50	+0.5
3,495,530	-		IAI47_16495	0.50	+0.0
3,495,530	-		IAI47_16495	0.50	+0.2
3,495,530	-		IAI47_16495	0.50	+0.1
3,495,530	-		IAI47_16495	0.50	+1.5
3,495,549	+		IAI47_16495	0.52	-1.4
3,495,555	+		IAI47_16495	0.52	-0.1
3,495,555	+		IAI47_16495	0.52	-0.2
3,495,555	+		IAI47_16495	0.52	+2.4
3,495,555	+		IAI47_16495	0.52	-0.3
3,495,555	+		IAI47_16495	0.52	+1.8
3,495,555	+		IAI47_16495	0.52	-0.9
3,495,555	+		IAI47_16495	0.52	-0.6
3,495,555	+		IAI47_16495	0.52	+1.4
3,495,556	-		IAI47_16495	0.52	+0.6
3,495,556	-		IAI47_16495	0.52	+0.9
3,495,556	-		IAI47_16495	0.52	-0.4
3,495,556	-		IAI47_16495	0.52	+1.8
3,495,556	-		IAI47_16495	0.52	-2.4
3,495,567	+		IAI47_16495	0.53	+0.0
3,495,568	-		IAI47_16495	0.53	+0.7
3,495,664	-		IAI47_16495	0.60	-2.4
3,495,776	+		IAI47_16495	0.68	-0.1
3,495,780	+		IAI47_16495	0.68	+0.3
3,495,780	+		IAI47_16495	0.68	-0.6
3,495,780	+		IAI47_16495	0.68	+0.6
3,495,781	-		IAI47_16495	0.68	-1.0
3,495,781	-		IAI47_16495	0.68	+1.8
3,495,792	+		IAI47_16495	0.69	-0.5
3,495,792	+		IAI47_16495	0.69	-0.5
3,495,792	+		IAI47_16495	0.69	+0.7
3,495,793	-		IAI47_16495	0.69	+0.7
3,495,793	-		IAI47_16495	0.69	-1.4
3,495,793	-		IAI47_16495	0.69	-0.0
3,495,793	-		IAI47_16495	0.69	-1.0
3,495,793	-		IAI47_16495	0.69	-0.3
3,495,793	-		IAI47_16495	0.69	-2.1
3,495,793	-		IAI47_16495	0.69	+0.4
3,495,793	-		IAI47_16495	0.69	-0.2
3,495,793	-		IAI47_16495	0.69	-0.6
3,495,793	-		IAI47_16495	0.69	-1.2
3,495,793	-		IAI47_16495	0.69	+1.2
3,495,826	+		IAI47_16495	0.71	+0.6
3,495,826	+		IAI47_16495	0.71	+0.0
3,495,826	+		IAI47_16495	0.71	+0.7
3,495,826	+		IAI47_16495	0.71	+2.4
3,495,826	+		IAI47_16495	0.71	+1.4
3,495,826	+		IAI47_16495	0.71	+1.2
3,495,826	+		IAI47_16495	0.71	-0.4
3,495,826	+		IAI47_16495	0.71	-0.9
3,495,827	-		IAI47_16495	0.71	-1.7
3,495,827	-		IAI47_16495	0.71	-0.3
3,495,827	-		IAI47_16495	0.71	+0.0
3,495,827	-		IAI47_16495	0.71	-0.6
3,495,827	-		IAI47_16495	0.71	+1.9
3,495,827	-		IAI47_16495	0.71	+0.7
3,495,827	-		IAI47_16495	0.71	-0.8
3,495,827	-		IAI47_16495	0.71	-0.4
3,495,827	-		IAI47_16495	0.71	-1.1
3,495,827	-		IAI47_16495	0.71	-0.1
3,495,827	-		IAI47_16495	0.71	-0.3
3,495,846	+		IAI47_16495	0.73	+0.6
3,495,847	-		IAI47_16495	0.73	-0.8
3,495,946	+		IAI47_16495	0.80	+0.9
3,495,946	+		IAI47_16495	0.80	+0.6
3,495,946	+		IAI47_16495	0.80	-1.7
3,495,946	+		IAI47_16495	0.80	+0.6
3,495,946	+		IAI47_16495	0.80	+0.1
3,495,946	+		IAI47_16495	0.80	+0.8
3,495,946	+		IAI47_16495	0.80	+0.5
3,495,946	+		IAI47_16495	0.80	+0.3
3,495,946	+		IAI47_16495	0.80	-1.1
3,495,946	+		IAI47_16495	0.80	+2.0
3,495,946	+		IAI47_16495	0.80	-1.2
3,495,947	-		IAI47_16495	0.80	-0.1
3,495,947	-		IAI47_16495	0.80	+0.1
3,495,947	-		IAI47_16495	0.80	-1.4
3,495,947	-		IAI47_16495	0.80	+0.3
3,495,947	-		IAI47_16495	0.80	-0.8
3,495,947	-		IAI47_16495	0.80	+2.2
3,495,947	-		IAI47_16495	0.80	+1.6
3,495,947	-		IAI47_16495	0.80	-0.2
3,495,947	-		IAI47_16495	0.80	+3.6
3,495,947	-		IAI47_16495	0.80	-3.3
3,495,947	-		IAI47_16495	0.80	-1.0
3,495,947	-		IAI47_16495	0.80	+0.2
3,495,947	-		IAI47_16495	0.80	-1.4
3,495,966	+		IAI47_16495	0.81	-2.0
3,495,966	+		IAI47_16495	0.81	+0.6
3,495,967	-		IAI47_16495	0.81	+0.8
3,495,988	+		IAI47_16495	0.83	-0.2
3,495,989	-		IAI47_16495	0.83	-0.7
3,496,119	+				+0.6
3,496,144	+				+0.4
3,496,145	-				+0.3
3,496,145	-				+0.2
3,496,209	+				+0.0
3,496,210	-				+0.6
3,496,210	-				-1.8
3,496,210	-				-0.2
3,496,234	+				+1.8
3,496,235	-				-0.6
3,496,235	-				+1.4
3,496,241	+				-0.2
3,496,241	+				+1.6
3,496,242	-				+0.1
3,496,242	-				-0.4
3,496,242	-				+0.2
3,496,242	-				-0.7
3,496,248	+				+0.8
3,496,248	+				-0.4
3,496,248	+				+0.6
3,496,249	-				+1.1
3,496,249	-				+0.3
3,496,249	-				-0.8
3,496,249	-				-1.1
3,496,249	-				-0.3
3,496,249	-				+0.4
3,496,249	-				-0.5
3,496,249	-				-0.1
3,496,429	-		IAI47_16500	0.22	+0.7
3,496,429	-		IAI47_16500	0.22	-1.0
3,496,469	-		IAI47_16500	0.26	-1.4
3,496,469	-		IAI47_16500	0.26	-0.1
3,496,469	-		IAI47_16500	0.26	+1.0
3,496,518	+		IAI47_16500	0.32	+1.4
3,496,518	+		IAI47_16500	0.32	+1.9
3,496,530	-		IAI47_16500	0.33	-1.3
3,496,574	+		IAI47_16500	0.39	+0.8
3,496,574	+		IAI47_16500	0.39	+0.9
3,496,574	+		IAI47_16500	0.39	-2.1
3,496,603	+		IAI47_16500	0.42	-1.0
3,496,604	-		IAI47_16500	0.42	-0.2
3,496,604	-		IAI47_16500	0.42	+0.3
3,496,616	+		IAI47_16500	0.43	+0.1
3,496,616	+		IAI47_16500	0.43	-1.3
3,496,616	+		IAI47_16500	0.43	-1.3
3,496,617	-		IAI47_16500	0.44	+0.2
3,496,617	-		IAI47_16500	0.44	-0.2
3,496,617	-		IAI47_16500	0.44	-1.4
3,496,695	+		IAI47_16500	0.53	-0.5
3,496,695	+		IAI47_16500	0.53	-1.4
3,496,695	+		IAI47_16500	0.53	-1.8
3,496,697	+		IAI47_16500	0.53	-1.1
3,496,727	-		IAI47_16500	0.56	-1.7
3,496,727	-		IAI47_16500	0.56	+0.3
3,496,727	-		IAI47_16500	0.56	+0.4
3,496,745	+		IAI47_16500	0.58	-2.3
3,496,783	-		IAI47_16500	0.63	+1.7
3,496,835	+		IAI47_16500	0.69	-0.4
3,496,835	+		IAI47_16500	0.69	+0.2
3,496,836	-		IAI47_16500	0.69	-0.8
3,496,836	-		IAI47_16500	0.69	-0.4
3,496,836	-		IAI47_16500	0.69	-0.4
3,496,836	-		IAI47_16500	0.69	-0.9
3,496,847	+		IAI47_16500	0.70	-2.1
3,496,928	+		IAI47_16500	0.80	-1.9
3,496,928	+		IAI47_16500	0.80	-0.7
3,496,929	-		IAI47_16500	0.80	+1.8
3,496,929	-		IAI47_16500	0.80	+0.8
3,496,929	-		IAI47_16500	0.80	-1.5
3,496,929	-		IAI47_16500	0.80	+0.1
3,496,929	-		IAI47_16500	0.80	-2.9
3,496,929	-		IAI47_16500	0.80	-3.4
3,496,931	+		IAI47_16500	0.80	-1.3
3,496,932	-		IAI47_16500	0.80	+1.6
3,497,003	+		IAI47_16500	0.88	+0.7
3,497,003	+		IAI47_16500	0.88	-1.4
3,497,004	-		IAI47_16500	0.89	-1.1
3,497,004	-		IAI47_16500	0.89	+0.2
3,497,004	-		IAI47_16500	0.89	+2.2
3,497,004	-		IAI47_16500	0.89	+0.2
3,497,069	+				-2.4
3,497,069	+				-2.5
3,497,070	-				+1.4
3,497,094	+				+0.2
3,497,095	-				+0.3
3,497,101	-				-0.6
3,497,119	+				-1.0
3,497,119	+				-1.7
3,497,120	-				+1.2
3,497,120	-				+0.8
3,497,177	+				-1.4
3,497,178	-				+0.5