Strain Fitness in Pantoea sp. MT58 around IAI47_13195

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,790,826	+		IAI47_13190	0.30	-2.2
2,790,826	+		IAI47_13190	0.30	+0.8
2,790,826	+		IAI47_13190	0.30	-0.9
2,790,827	-		IAI47_13190	0.30	-1.2
2,790,827	-		IAI47_13190	0.30	-1.4
2,791,048	+		IAI47_13190	0.54	-1.4
2,791,048	+		IAI47_13190	0.54	+0.1
2,791,048	+		IAI47_13190	0.54	+0.5
2,791,048	+		IAI47_13190	0.54	-2.0
2,791,048	+		IAI47_13190	0.54	+0.7
2,791,048	+		IAI47_13190	0.54	-0.2
2,791,048	+		IAI47_13190	0.54	+1.1
2,791,048	+		IAI47_13190	0.54	+1.3
2,791,048	+		IAI47_13190	0.54	+0.0
2,791,048	+		IAI47_13190	0.54	-1.2
2,791,048	+		IAI47_13190	0.54	+0.2
2,791,048	+		IAI47_13190	0.54	-1.2
2,791,048	+		IAI47_13190	0.54	-0.5
2,791,048	+		IAI47_13190	0.54	-1.3
2,791,048	+		IAI47_13190	0.54	+1.7
2,791,048	+		IAI47_13190	0.54	+0.2
2,791,049	-		IAI47_13190	0.54	+2.3
2,791,049	-		IAI47_13190	0.54	+0.7
2,791,049	-		IAI47_13190	0.54	+0.8
2,791,049	-		IAI47_13190	0.54	-0.6
2,791,049	-		IAI47_13190	0.54	+3.1
2,791,049	-		IAI47_13190	0.54	+0.8
2,791,049	-		IAI47_13190	0.54	+1.2
2,791,049	-		IAI47_13190	0.54	-0.2
2,791,050	+		IAI47_13190	0.54	+1.5
2,791,051	-		IAI47_13190	0.54	-0.2
2,791,051	-		IAI47_13190	0.54	+0.5
2,791,228	+		IAI47_13190	0.74	-0.0
2,791,229	-		IAI47_13190	0.74	-1.1
2,791,229	-		IAI47_13190	0.74	-1.5
2,791,229	-		IAI47_13190	0.74	-0.2
2,791,229	-		IAI47_13190	0.74	+0.5
2,791,352	+		IAI47_13190	0.87	-2.0
2,791,352	+		IAI47_13190	0.87	+0.7
2,791,353	-		IAI47_13190	0.87	+0.4
2,791,353	-		IAI47_13190	0.87	+0.2
2,791,353	-		IAI47_13190	0.87	+1.6
2,791,368	-		IAI47_13190	0.89	+0.8
2,791,368	-		IAI47_13190	0.89	+1.1
2,791,430	+				+2.8
2,791,430	+				+1.4
2,791,430	+				+0.7
2,791,431	-				+1.8
2,791,431	-				+1.1
2,791,431	-				+0.9
2,791,431	-				-0.6
2,791,446	-				+1.8
2,791,465	+				+0.5
2,791,466	-				+2.9
2,791,466	-				+0.3
2,791,475	+				+0.8
2,791,475	+				+1.4
2,791,500	+				+2.7
2,791,557	+				-0.4
2,791,558	-				+0.6
2,791,558	-				-1.9
2,791,575	+				-1.5
2,791,575	+				+0.0
2,791,582	+				+2.1
2,791,582	+				+0.2
2,791,586	+				+0.1
2,791,592	+				-0.7
2,791,619	+				+1.2
2,791,636	-				+0.9
2,791,641	-				+0.2
2,791,677	+				-0.9
2,791,678	-				-1.5
2,791,678	-				-0.9
2,791,678	-				-1.6
2,791,678	-				-2.0
2,791,678	-				+2.6
2,791,693	+				+1.8
2,791,694	-				-0.6
2,791,694	-				-2.1
2,791,694	-				-0.9
2,791,694	-				-0.4
2,791,694	-				+0.7
2,791,702	+				-0.6
2,791,709	-				+2.2
2,791,709	-				+0.7
2,791,741	+				+0.2
2,791,741	+				-1.3
2,791,742	-				+0.4
2,791,742	-				-0.7
2,791,743	+				-1.7
2,791,743	+				-0.5
2,791,743	+				-0.6
2,791,743	+				+0.2
2,791,743	+				-1.1
2,791,743	+				-1.6
2,791,743	+				+0.4
2,791,743	+				-0.3
2,791,743	+				-1.6
2,791,744	-				+0.2
2,791,744	-				+2.0
2,791,744	-				+0.1
2,791,744	-				+2.8
2,791,744	-				-0.2
2,791,744	-				-0.2
2,791,744	-				+0.6
2,791,747	+				-1.8
2,791,747	+				+1.5
2,791,748	-				+1.2
2,791,762	+				+0.4
2,791,798	+				-0.1
2,791,838	+				+0.5
2,791,838	+				-0.2
2,791,838	+				-1.6
2,791,838	+				-0.1
2,791,838	+				+0.5
2,791,838	+				-0.0
2,791,839	-				-0.2
2,791,839	-				+0.4
2,791,841	-				-0.9
2,791,847	-		IAI47_13195	0.11	-1.6
2,791,902	+		IAI47_13195	0.22	+1.7
2,791,903	-		IAI47_13195	0.22	+0.4
2,791,912	+		IAI47_13195	0.24	-1.6
2,791,913	-		IAI47_13195	0.24	+0.8
2,791,913	-		IAI47_13195	0.24	-1.0
2,791,930	+		IAI47_13195	0.27	+0.5
2,791,930	+		IAI47_13195	0.27	+0.0
2,791,931	-		IAI47_13195	0.27	-0.3
2,791,931	-		IAI47_13195	0.27	-1.6
2,791,931	-		IAI47_13195	0.27	-0.8
2,791,933	+		IAI47_13195	0.28	-1.0
2,791,933	+		IAI47_13195	0.28	-0.3
2,791,933	+		IAI47_13195	0.28	-2.0
2,791,934	-		IAI47_13195	0.28	-1.9
2,791,934	-		IAI47_13195	0.28	-0.1
2,791,934	-		IAI47_13195	0.28	+0.2
2,791,934	-		IAI47_13195	0.28	+0.7
2,791,963	+		IAI47_13195	0.34	-2.5
2,791,963	+		IAI47_13195	0.34	-1.6
2,791,963	+		IAI47_13195	0.34	-0.2
2,791,963	+		IAI47_13195	0.34	+0.8
2,791,963	+		IAI47_13195	0.34	-1.0
2,791,964	-		IAI47_13195	0.34	-0.2
2,791,964	-		IAI47_13195	0.34	+1.6
2,791,977	+		IAI47_13195	0.37	-2.3
2,791,977	+		IAI47_13195	0.37	-0.5
2,791,978	-		IAI47_13195	0.37	+1.8
2,791,978	-		IAI47_13195	0.37	-0.9
2,791,978	-		IAI47_13195	0.37	+0.0
2,792,046	+		IAI47_13195	0.50	+0.2
2,792,047	-		IAI47_13195	0.50	-0.3
2,792,047	-		IAI47_13195	0.50	+0.0
2,792,047	-		IAI47_13195	0.50	-0.4
2,792,092	+		IAI47_13195	0.59	-0.6
2,792,093	-		IAI47_13195	0.60	+0.8
2,792,122	+		IAI47_13195	0.65	+2.4
2,792,122	+		IAI47_13195	0.65	-0.3
2,792,123	-		IAI47_13195	0.65	+0.4
2,792,165	+		IAI47_13195	0.74	+0.2
2,792,166	-		IAI47_13195	0.74	-0.2
2,792,167	+		IAI47_13195	0.74	+0.2
2,792,167	+		IAI47_13195	0.74	-0.8
2,792,167	+		IAI47_13195	0.74	+1.0
2,792,167	+		IAI47_13195	0.74	-1.1
2,792,167	+		IAI47_13195	0.74	-1.3
2,792,168	-		IAI47_13195	0.74	-1.2
2,792,168	-		IAI47_13195	0.74	-0.6
2,792,180	-		IAI47_13195	0.77	-2.8
2,792,180	-		IAI47_13195	0.77	+0.5
2,792,191	+		IAI47_13195	0.79	-1.2
2,792,192	-		IAI47_13195	0.79	-0.9
2,792,192	-		IAI47_13195	0.79	-0.6
2,792,200	+		IAI47_13195	0.81	+0.2
2,792,200	+		IAI47_13195	0.81	-0.5
2,792,200	+		IAI47_13195	0.81	-0.8
2,792,201	-		IAI47_13195	0.81	+0.2
2,792,221	+		IAI47_13195	0.85	+0.5
2,792,222	-		IAI47_13195	0.85	-1.3
2,792,236	+		IAI47_13195	0.88	-1.4
2,792,236	+		IAI47_13195	0.88	+0.1
2,792,236	+		IAI47_13195	0.88	-0.1
2,792,237	-		IAI47_13195	0.88	+0.2
2,792,294	+				+0.8
2,792,295	-				-0.6
2,792,402	+				-0.6
2,792,402	+				+1.9
2,792,403	-				-0.2
2,792,403	-				+0.7
2,792,403	-				+1.0
2,792,419	+				+3.2
2,792,442	+				-0.3
2,792,442	+				+0.5
2,792,442	+				-1.0
2,792,442	+				+2.1
2,792,443	-				+0.0
2,792,463	+				-0.3
2,792,464	-				-1.3
2,792,464	-				-1.1
2,792,464	-				-0.8
2,792,505	+				+0.1
2,792,505	+				-1.0
2,792,506	-				+1.5
2,792,506	-				+1.0
2,792,506	-				+0.3
2,792,506	-				-0.9
2,792,511	-				+0.7
2,792,511	-				+1.1
2,792,511	-				-0.8
2,792,514	+				+0.7
2,792,515	-				-0.8
2,792,515	-				-2.7
2,792,515	-				-1.9
2,792,515	-				+0.7
2,792,554	+				+0.5
2,792,554	+				-0.8
2,792,629	+				+0.0
2,792,630	-				+0.8
2,792,687	+				-1.6
2,792,687	+				+0.7
2,792,688	-				+1.1
2,792,751	+		IAI47_13200	0.18	+0.3
2,792,751	+		IAI47_13200	0.18	-1.0
2,792,751	+		IAI47_13200	0.18	-0.4
2,792,751	+		IAI47_13200	0.18	-0.8
2,792,751	+		IAI47_13200	0.18	-0.5
2,792,751	+		IAI47_13200	0.18	+1.8
2,792,751	+		IAI47_13200	0.18	+0.5
2,792,751	+		IAI47_13200	0.18	+1.0
2,792,751	+		IAI47_13200	0.18	+1.2
2,792,751	+		IAI47_13200	0.18	-0.5
2,792,751	+		IAI47_13200	0.18	-0.4
2,792,751	+		IAI47_13200	0.18	-0.8
2,792,751	+		IAI47_13200	0.18	-0.8
2,792,751	+		IAI47_13200	0.18	-1.3
2,792,752	-		IAI47_13200	0.18	-1.3
2,792,752	-		IAI47_13200	0.18	+0.9
2,792,752	-		IAI47_13200	0.18	-0.9
2,792,752	-		IAI47_13200	0.18	-0.3
2,792,752	-		IAI47_13200	0.18	-0.6
2,792,752	-		IAI47_13200	0.18	-0.9
2,792,752	-		IAI47_13200	0.18	+1.4
2,792,808	+		IAI47_13200	0.26	+0.7
2,792,808	+		IAI47_13200	0.26	-1.3
2,792,808	+		IAI47_13200	0.26	-0.3
2,792,808	+		IAI47_13200	0.26	-0.1
2,792,808	+		IAI47_13200	0.26	-0.3
2,792,808	+		IAI47_13200	0.26	-0.1
2,792,808	+		IAI47_13200	0.26	+1.1
2,792,808	+		IAI47_13200	0.26	+0.5
2,792,809	-		IAI47_13200	0.26	+1.0
2,792,809	-		IAI47_13200	0.26	-1.9
2,792,809	-		IAI47_13200	0.26	+1.3
2,792,810	+		IAI47_13200	0.26	-0.3
2,792,810	+		IAI47_13200	0.26	-1.9
2,792,810	+		IAI47_13200	0.26	-0.3
2,792,811	-		IAI47_13200	0.26	-0.6
2,792,811	-		IAI47_13200	0.26	+1.0
2,792,811	-		IAI47_13200	0.26	+2.6
2,792,907	-		IAI47_13200	0.39	-0.3
2,792,907	-		IAI47_13200	0.39	+0.6
2,792,907	-		IAI47_13200	0.39	-1.6
2,792,935	-		IAI47_13200	0.43	-1.8
2,792,935	-		IAI47_13200	0.43	+0.0
2,792,937	+		IAI47_13200	0.43	-0.5
2,792,938	-		IAI47_13200	0.43	-1.8
2,792,956	+		IAI47_13200	0.46	+0.4
2,792,956	+		IAI47_13200	0.46	-0.5
2,792,956	+		IAI47_13200	0.46	+1.2
2,792,956	+		IAI47_13200	0.46	-0.6
2,792,957	-		IAI47_13200	0.46	-0.4
2,792,957	-		IAI47_13200	0.46	-0.8
2,792,967	-		IAI47_13200	0.47	-0.8
2,792,967	-		IAI47_13200	0.47	-0.2
2,793,071	+		IAI47_13200	0.61	+0.2
2,793,071	+		IAI47_13200	0.61	+0.6
2,793,071	+		IAI47_13200	0.61	-0.1
2,793,072	-		IAI47_13200	0.61	+0.6
2,793,108	+		IAI47_13200	0.66	+0.3
2,793,108	+		IAI47_13200	0.66	+1.2
2,793,108	+		IAI47_13200	0.66	+1.2
2,793,109	-		IAI47_13200	0.66	+0.2
2,793,109	-		IAI47_13200	0.66	+0.7
2,793,109	-		IAI47_13200	0.66	-0.7
2,793,168	+		IAI47_13200	0.74	+1.7
2,793,168	+		IAI47_13200	0.74	+2.8
2,793,169	-		IAI47_13200	0.74	+0.5
2,793,169	-		IAI47_13200	0.74	+1.2
2,793,169	-		IAI47_13200	0.74	+0.3
2,793,169	-		IAI47_13200	0.74	+1.8
2,793,188	+		IAI47_13200	0.77	+0.8
2,793,200	+		IAI47_13200	0.78	+0.9
2,793,208	+		IAI47_13200	0.79	-2.3
2,793,234	+		IAI47_13200	0.83	+2.8
2,793,234	+		IAI47_13200	0.83	-2.3
2,793,234	+		IAI47_13200	0.83	+0.8
2,793,234	+		IAI47_13200	0.83	+0.5
2,793,234	+		IAI47_13200	0.83	-0.3
2,793,234	+		IAI47_13200	0.83	+0.2
2,793,234	+		IAI47_13200	0.83	-3.1
2,793,234	+		IAI47_13200	0.83	+0.2
2,793,235	-		IAI47_13200	0.83	-0.3
2,793,235	-		IAI47_13200	0.83	+0.7
2,793,235	-		IAI47_13200	0.83	-0.3
2,793,235	-		IAI47_13200	0.83	+0.7
2,793,235	-		IAI47_13200	0.83	-1.1
2,793,268	+		IAI47_13200	0.87	+0.0
2,793,269	-		IAI47_13200	0.87	-1.4