Strain Fitness in Pantoea sp. MT58 around IAI47_09605

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,031,131	+		IAI47_09600	0.58	+0.4
2,031,131	+		IAI47_09600	0.58	+1.8
2,031,132	-		IAI47_09600	0.58	-1.5
2,031,147	+		IAI47_09600	0.60	+2.0
2,031,148	-		IAI47_09600	0.60	+1.0
2,031,174	+		IAI47_09600	0.62	+2.3
2,031,174	+		IAI47_09600	0.62	-0.7
2,031,174	+		IAI47_09600	0.62	-1.3
2,031,175	-		IAI47_09600	0.62	-1.0
2,031,175	-		IAI47_09600	0.62	+1.4
2,031,199	-		IAI47_09600	0.63	-0.3
2,031,262	+		IAI47_09600	0.68	+1.5
2,031,263	-		IAI47_09600	0.68	+1.4
2,031,301	-		IAI47_09600	0.71	+1.0
2,031,301	-		IAI47_09600	0.71	-2.0
2,031,301	-		IAI47_09600	0.71	+0.8
2,031,394	+		IAI47_09600	0.78	-2.1
2,031,414	+		IAI47_09600	0.79	-0.1
2,031,414	+		IAI47_09600	0.79	-1.7
2,031,415	-		IAI47_09600	0.79	+0.8
2,031,420	+		IAI47_09600	0.80	+0.5
2,031,420	+		IAI47_09600	0.80	-0.7
2,031,420	+		IAI47_09600	0.80	+0.5
2,031,420	+		IAI47_09600	0.80	+1.2
2,031,420	+		IAI47_09600	0.80	-3.1
2,031,421	-		IAI47_09600	0.80	+1.0
2,031,421	-		IAI47_09600	0.80	-0.1
2,031,457	-		IAI47_09600	0.83	-0.1
2,031,457	-		IAI47_09600	0.83	-0.1
2,031,457	-		IAI47_09600	0.83	-0.2
2,031,474	-		IAI47_09600	0.84	+0.3
2,031,493	+		IAI47_09600	0.85	-1.7
2,031,493	+		IAI47_09600	0.85	-1.0
2,031,493	+		IAI47_09600	0.85	-1.7
2,031,494	-		IAI47_09600	0.85	+0.1
2,031,494	-		IAI47_09600	0.85	+0.9
2,031,494	-		IAI47_09600	0.85	+0.7
2,031,537	+		IAI47_09600	0.89	+0.4
2,031,537	+		IAI47_09600	0.89	-1.7
2,031,537	+		IAI47_09600	0.89	+0.5
2,031,635	+				+0.6
2,031,635	+				+0.5
2,031,635	+				-0.8
2,031,635	+				-1.0
2,031,636	-				+1.3
2,031,637	+				-1.7
2,031,637	+				+0.1
2,031,637	+				-1.4
2,031,637	+				-1.0
2,031,637	+				-1.5
2,031,637	+				-1.4
2,031,637	+				-0.7
2,031,638	-				-0.3
2,031,638	-				+1.1
2,031,638	-				-1.9
2,031,699	-				-0.3
2,031,699	-				+1.9
2,031,711	+				+0.2
2,031,711	+				-0.7
2,031,711	+				+0.1
2,031,712	-				-0.2
2,031,712	-				+0.3
2,031,748	+				+1.6
2,031,749	-				-1.8
2,031,772	+				+1.0
2,031,875	+				+0.5
2,031,876	-				-0.3
2,031,876	-				+1.1
2,031,876	-				+0.5
2,031,885	-				-1.6
2,031,957	+				+0.2
2,031,957	+				+0.5
2,031,958	-				+0.0
2,031,968	-				-1.7
2,032,013	+				+0.1
2,032,014	-				-0.3
2,032,014	-				+1.8
2,032,039	+				+0.8
2,032,059	+				-2.1
2,032,060	-				+0.8
2,032,070	+				+0.3
2,032,070	+				-0.3
2,032,070	+				-0.1
2,032,071	-				-0.2
2,032,071	-				-0.1
2,032,071	-				+0.9
2,032,088	+				-1.2
2,032,089	-				-0.2
2,032,089	-				-1.8
2,032,104	-				+0.1
2,032,166	+				-0.7
2,032,167	-				+1.6
2,032,167	-				+0.6
2,032,167	-				+0.5
2,032,196	+				-0.8
2,032,197	-				-0.2
2,032,200	+				+0.2
2,032,200	+				-1.8
2,032,200	+				-0.4
2,032,200	+				-1.5
2,032,200	+				-0.3
2,032,208	+				-0.1
2,032,208	+				+0.2
2,032,208	+				+1.7
2,032,208	+				+1.1
2,032,208	+				-0.4
2,032,209	-				-1.2
2,032,209	-				-0.2
2,032,209	-				+0.2
2,032,209	-				-1.0
2,032,209	-				-1.0
2,032,209	-				+0.2
2,032,213	+				+1.4
2,032,213	+				+0.3
2,032,239	-				-1.0
2,032,265	+				-1.0
2,032,265	+				+0.6
2,032,265	+				-1.0
2,032,265	+				-0.1
2,032,327	+		IAI47_09605	0.14	-0.5
2,032,327	+		IAI47_09605	0.14	+1.0
2,032,328	-		IAI47_09605	0.14	+0.1
2,032,328	-		IAI47_09605	0.14	+0.5
2,032,328	-		IAI47_09605	0.14	+1.3
2,032,366	-		IAI47_09605	0.16	+0.5
2,032,381	+		IAI47_09605	0.17	+2.6
2,032,382	-		IAI47_09605	0.17	+0.3
2,032,456	+		IAI47_09605	0.22	+0.4
2,032,456	+		IAI47_09605	0.22	-0.2
2,032,457	-		IAI47_09605	0.22	+1.1
2,032,457	-		IAI47_09605	0.22	-0.7
2,032,486	+		IAI47_09605	0.24	-0.5
2,032,486	+		IAI47_09605	0.24	-0.5
2,032,486	+		IAI47_09605	0.24	+0.2
2,032,533	+		IAI47_09605	0.27	+1.4
2,032,533	+		IAI47_09605	0.27	-1.1
2,032,534	-		IAI47_09605	0.27	+0.2
2,032,538	-		IAI47_09605	0.27	+1.3
2,032,607	+		IAI47_09605	0.32	+0.9
2,032,784	+		IAI47_09605	0.44	+0.1
2,032,784	+		IAI47_09605	0.44	+1.4
2,032,785	-		IAI47_09605	0.44	-2.0
2,032,796	-		IAI47_09605	0.44	-0.3
2,032,796	-		IAI47_09605	0.44	-1.2
2,032,796	-		IAI47_09605	0.44	-0.5
2,032,797	+		IAI47_09605	0.45	+0.2
2,032,797	+		IAI47_09605	0.45	+0.3
2,032,798	-		IAI47_09605	0.45	+2.1
2,032,798	-		IAI47_09605	0.45	+0.7
2,032,973	+		IAI47_09605	0.56	-0.7
2,032,973	+		IAI47_09605	0.56	+0.5
2,032,974	-		IAI47_09605	0.56	+1.0
2,032,974	-		IAI47_09605	0.56	+0.2
2,033,002	-		IAI47_09605	0.58	-1.3
2,033,002	-		IAI47_09605	0.58	+2.5
2,033,043	+		IAI47_09605	0.61	+1.5
2,033,043	+		IAI47_09605	0.61	-0.1
2,033,044	-		IAI47_09605	0.61	-0.7
2,033,072	-		IAI47_09605	0.63	+2.2
2,033,088	+		IAI47_09605	0.64	+0.9
2,033,089	-		IAI47_09605	0.64	+2.3
2,033,089	-		IAI47_09605	0.64	+2.0
2,033,108	+		IAI47_09605	0.65	-1.9
2,033,132	-		IAI47_09605	0.67	-0.4
2,033,137	-		IAI47_09605	0.67	-0.6
2,033,137	-		IAI47_09605	0.67	+1.2
2,033,137	-		IAI47_09605	0.67	+0.4
2,033,142	+		IAI47_09605	0.67	+1.4
2,033,142	+		IAI47_09605	0.67	+0.0
2,033,143	-		IAI47_09605	0.67	+1.4
2,033,143	-		IAI47_09605	0.67	-1.6
2,033,143	-		IAI47_09605	0.67	-1.0
2,033,143	-		IAI47_09605	0.67	-1.6
2,033,152	+		IAI47_09605	0.68	+1.1
2,033,152	+		IAI47_09605	0.68	+0.5
2,033,152	+		IAI47_09605	0.68	+0.9
2,033,152	+		IAI47_09605	0.68	-2.2
2,033,153	-		IAI47_09605	0.68	+0.4
2,033,153	-		IAI47_09605	0.68	+0.2
2,033,153	-		IAI47_09605	0.68	-1.3
2,033,153	-		IAI47_09605	0.68	-1.5
2,033,153	-		IAI47_09605	0.68	+0.3
2,033,153	-		IAI47_09605	0.68	+0.8
2,033,153	-		IAI47_09605	0.68	-1.7
2,033,153	-		IAI47_09605	0.68	+0.6
2,033,153	-		IAI47_09605	0.68	+1.8
2,033,153	-		IAI47_09605	0.68	-1.2
2,033,153	-		IAI47_09605	0.68	+0.5
2,033,153	-		IAI47_09605	0.68	-0.5
2,033,153	-		IAI47_09605	0.68	+1.8
2,033,174	+		IAI47_09605	0.69	+0.9
2,033,175	-		IAI47_09605	0.69	+0.5
2,033,200	-		IAI47_09605	0.71	-0.1
2,033,200	-		IAI47_09605	0.71	-0.6
2,033,281	+		IAI47_09605	0.76	-1.9
2,033,344	+		IAI47_09605	0.80	+0.3
2,033,344	+		IAI47_09605	0.80	-0.0
2,033,344	+		IAI47_09605	0.80	+1.4
2,033,344	+		IAI47_09605	0.80	+2.5
2,033,344	+		IAI47_09605	0.80	+0.7
2,033,344	+		IAI47_09605	0.80	+1.3
2,033,344	+		IAI47_09605	0.80	+0.3
2,033,345	-		IAI47_09605	0.81	+1.4
2,033,345	-		IAI47_09605	0.81	+0.8
2,033,345	-		IAI47_09605	0.81	-2.1
2,033,345	-		IAI47_09605	0.81	+0.5
2,033,345	-		IAI47_09605	0.81	-0.5
2,033,345	-		IAI47_09605	0.81	+1.8
2,033,355	+		IAI47_09605	0.81	-0.7
2,033,355	+		IAI47_09605	0.81	-0.4
2,033,437	+		IAI47_09605	0.87	+1.1
2,033,438	-		IAI47_09605	0.87	-1.3
2,033,438	-		IAI47_09605	0.87	+0.4
2,033,470	+		IAI47_09605	0.89	-1.7
2,033,470	+		IAI47_09605	0.89	-0.0
2,033,470	+		IAI47_09605	0.89	+0.8
2,033,470	+		IAI47_09605	0.89	-0.1
2,033,471	-		IAI47_09605	0.89	+0.9
2,033,472	+		IAI47_09605	0.89	-1.1
2,033,472	+		IAI47_09605	0.89	-1.9
2,033,472	+		IAI47_09605	0.89	+0.0
2,033,472	+		IAI47_09605	0.89	+1.0
2,033,472	+		IAI47_09605	0.89	+1.6
2,033,472	+		IAI47_09605	0.89	+1.1
2,033,472	+		IAI47_09605	0.89	-0.4
2,033,472	+		IAI47_09605	0.89	+0.1
2,033,473	-		IAI47_09605	0.89	+1.2
2,033,473	-		IAI47_09605	0.89	-1.1
2,033,473	-		IAI47_09605	0.89	+1.2
2,033,473	-		IAI47_09605	0.89	+1.2
2,033,473	-		IAI47_09605	0.89	-0.7
2,033,473	-		IAI47_09605	0.89	-1.6
2,033,553	+				+1.3
2,033,553	+				-0.3
2,033,553	+				+1.5
2,033,554	-				-1.5
2,033,613	-				-0.3
2,033,613	-				-1.3
2,033,616	-				-0.4
2,033,638	+				-1.8
2,033,704	-				+1.6
2,033,723	+				-0.8
2,033,818	-				+2.9
2,033,844	+				-0.5
2,033,844	+				-0.7
2,033,845	-				+0.9
2,033,846	+				-0.1
2,033,847	-				-0.6
2,033,922	+				+0.9
2,033,922	+				-2.0
2,033,923	-				+0.6
2,033,923	-				-1.1
2,033,945	+				-1.2
2,033,946	-				+1.1
2,033,946	-				-0.6
2,033,946	-				-0.2
2,033,947	+				-0.9
2,033,947	+				+0.7
2,033,947	+				+3.1
2,033,947	+				-2.0
2,033,947	+				-0.4
2,033,948	-				+0.9
2,033,948	-				-1.9
2,034,041	+		IAI47_09610	0.11	+1.6
2,034,042	-		IAI47_09610	0.11	+0.9
2,034,095	-		IAI47_09610	0.14	-0.4
2,034,095	-		IAI47_09610	0.14	-1.0
2,034,117	-		IAI47_09610	0.16	+0.5
2,034,145	+		IAI47_09610	0.17	+1.9
2,034,145	+		IAI47_09610	0.17	+0.7
2,034,145	+		IAI47_09610	0.17	-1.7
2,034,145	+		IAI47_09610	0.17	+0.8
2,034,145	+		IAI47_09610	0.17	-0.5
2,034,146	-		IAI47_09610	0.17	+0.5
2,034,146	-		IAI47_09610	0.17	+0.2
2,034,253	-		IAI47_09610	0.24	-1.3
2,034,296	+		IAI47_09610	0.26	-1.1
2,034,331	-		IAI47_09610	0.28	+1.6
2,034,331	-		IAI47_09610	0.28	-1.0
2,034,331	-		IAI47_09610	0.28	-0.1
2,034,392	-		IAI47_09610	0.32	-0.7
2,034,438	+		IAI47_09610	0.35	+0.5
2,034,438	+		IAI47_09610	0.35	-1.3
2,034,438	+		IAI47_09610	0.35	+2.5
2,034,439	-		IAI47_09610	0.35	+0.4
2,034,439	-		IAI47_09610	0.35	-0.5
2,034,439	-		IAI47_09610	0.35	-0.3
2,034,439	-		IAI47_09610	0.35	+0.4
2,034,439	-		IAI47_09610	0.35	+0.0
2,034,442	+		IAI47_09610	0.35	+1.8
2,034,442	+		IAI47_09610	0.35	-1.8
2,034,442	+		IAI47_09610	0.35	+0.7
2,034,443	-		IAI47_09610	0.35	-0.3
2,034,443	-		IAI47_09610	0.35	-0.6
2,034,481	+		IAI47_09610	0.37	-0.3