Strain Fitness in Pantoea sp. MT58 around IAI47_06580

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,367,821	-		IAI47_06570	0.62	+0.3
1,367,821	-		IAI47_06570	0.62	-1.1
1,367,821	-		IAI47_06570	0.62	-1.9
1,367,821	-		IAI47_06570	0.62	+1.5
1,367,862	+		IAI47_06570	0.66	-1.7
1,367,862	+		IAI47_06570	0.66	+2.8
1,367,863	-		IAI47_06570	0.66	-0.5
1,367,877	+		IAI47_06570	0.67	+0.5
1,367,878	-		IAI47_06570	0.68	+2.0
1,367,883	+		IAI47_06570	0.68	-1.6
1,367,883	+		IAI47_06570	0.68	-0.2
1,367,883	+		IAI47_06570	0.68	-0.3
1,367,884	-		IAI47_06570	0.68	+0.1
1,367,884	-		IAI47_06570	0.68	-0.7
1,367,884	-		IAI47_06570	0.68	+1.5
1,367,994	+		IAI47_06570	0.79	-2.1
1,367,994	+		IAI47_06570	0.79	-1.8
1,367,995	-		IAI47_06570	0.79	+0.6
1,368,029	+		IAI47_06570	0.83	-1.4
1,368,029	+		IAI47_06570	0.83	+0.8
1,368,097	+		IAI47_06570	0.89	-1.0
1,368,097	+		IAI47_06570	0.89	-0.6
1,368,146	+				+0.1
1,368,147	-				+0.4
1,368,189	-				-1.9
1,368,217	+				+0.3
1,368,217	+				+1.9
1,368,217	+				+1.4
1,368,248	+				-0.9
1,368,248	+				+0.2
1,368,248	+				-1.7
1,368,248	+				-0.0
1,368,248	+				+2.0
1,368,259	-				+0.3
1,368,259	-				-2.4
1,368,259	-				-0.6
1,368,272	+				-1.1
1,368,273	-				-0.4
1,368,733	+				+2.9
1,368,733	+				+0.5
1,368,733	+				-1.7
1,368,734	-				+1.6
1,368,734	-				+0.0
1,368,735	+				-0.1
1,368,735	+				+0.7
1,368,735	+				-0.2
1,368,735	+				+2.3
1,368,736	-				+0.6
1,368,736	-				+0.6
1,368,736	-				+0.4
1,368,786	+				+1.4
1,368,893	+				-0.7
1,368,893	+				+0.0
1,368,893	+				+0.6
1,368,893	+				+0.2
1,368,894	-				+0.6
1,368,973	+		IAI47_06580	0.11	-0.4
1,368,973	+		IAI47_06580	0.11	-0.7
1,368,974	-		IAI47_06580	0.11	-1.4
1,368,974	-		IAI47_06580	0.11	+0.4
1,368,994	+		IAI47_06580	0.12	+0.2
1,368,994	+		IAI47_06580	0.12	+0.3
1,368,995	-		IAI47_06580	0.12	+2.8
1,368,995	-		IAI47_06580	0.12	-0.2
1,368,995	-		IAI47_06580	0.12	-0.2
1,369,056	+		IAI47_06580	0.15	+2.4
1,369,056	+		IAI47_06580	0.15	+1.1
1,369,057	-		IAI47_06580	0.15	+0.1
1,369,162	+		IAI47_06580	0.21	+0.8
1,369,163	-		IAI47_06580	0.22	+0.5
1,369,163	-		IAI47_06580	0.22	-0.8
1,369,216	+		IAI47_06580	0.25	+1.2
1,369,216	+		IAI47_06580	0.25	-0.0
1,369,216	+		IAI47_06580	0.25	-2.5
1,369,302	-		IAI47_06580	0.29	+1.8
1,369,450	+		IAI47_06580	0.38	+1.1
1,369,476	+		IAI47_06580	0.39	+0.6
1,369,477	-		IAI47_06580	0.39	+1.4
1,369,502	-		IAI47_06580	0.41	+1.1
1,369,655	-		IAI47_06580	0.50	+0.2
1,369,820	-		IAI47_06580	0.59	-0.8
1,369,820	-		IAI47_06580	0.59	-0.8
1,369,914	+		IAI47_06580	0.64	+2.5
1,369,914	+		IAI47_06580	0.64	-2.0
1,369,914	+		IAI47_06580	0.64	-0.6
1,369,915	-		IAI47_06580	0.64	+0.4
1,369,974	+		IAI47_06580	0.68	+0.2
1,369,974	+		IAI47_06580	0.68	+1.1
1,369,974	+		IAI47_06580	0.68	-1.6
1,369,974	+		IAI47_06580	0.68	-0.8
1,369,992	+		IAI47_06580	0.69	-1.6
1,369,992	+		IAI47_06580	0.69	-0.5
1,369,992	+		IAI47_06580	0.69	+0.8
1,369,992	+		IAI47_06580	0.69	+0.8
1,369,992	+		IAI47_06580	0.69	+2.5
1,369,992	+		IAI47_06580	0.69	-1.1
1,369,993	-		IAI47_06580	0.69	+1.3
1,369,993	-		IAI47_06580	0.69	+1.0
1,369,993	-		IAI47_06580	0.69	-0.6
1,369,993	-		IAI47_06580	0.69	+0.8
1,369,993	-		IAI47_06580	0.69	+0.3
1,369,993	-		IAI47_06580	0.69	-0.1
1,369,993	-		IAI47_06580	0.69	-1.6
1,369,993	-		IAI47_06580	0.69	+0.0
1,369,993	-		IAI47_06580	0.69	+1.7
1,369,993	-		IAI47_06580	0.69	+0.6
1,369,996	+		IAI47_06580	0.69	-0.2
1,369,996	+		IAI47_06580	0.69	-0.4
1,369,996	+		IAI47_06580	0.69	+0.4
1,369,996	+		IAI47_06580	0.69	-1.1
1,369,996	+		IAI47_06580	0.69	+0.2
1,369,996	+		IAI47_06580	0.69	+0.1
1,369,996	+		IAI47_06580	0.69	+0.9
1,369,996	+		IAI47_06580	0.69	-0.0
1,369,996	+		IAI47_06580	0.69	+0.9
1,369,996	+		IAI47_06580	0.69	-0.1
1,369,996	+		IAI47_06580	0.69	+0.2
1,369,996	+		IAI47_06580	0.69	+0.1
1,369,997	-		IAI47_06580	0.69	+0.7
1,369,997	-		IAI47_06580	0.69	-0.7
1,369,997	-		IAI47_06580	0.69	+0.2
1,369,997	-		IAI47_06580	0.69	+0.1
1,369,997	-		IAI47_06580	0.69	+1.4
1,369,997	-		IAI47_06580	0.69	+0.3
1,369,997	-		IAI47_06580	0.69	+0.9
1,369,997	-		IAI47_06580	0.69	+0.8
1,370,043	+		IAI47_06580	0.72	-1.5
1,370,044	-		IAI47_06580	0.72	+0.0
1,370,055	+		IAI47_06580	0.72	+0.3
1,370,056	-		IAI47_06580	0.72	-0.4
1,370,056	-		IAI47_06580	0.72	+1.9
1,370,068	+		IAI47_06580	0.73	+1.8
1,370,137	+		IAI47_06580	0.77	-1.9
1,370,137	+		IAI47_06580	0.77	+0.2
1,370,138	-		IAI47_06580	0.77	-1.5
1,370,138	-		IAI47_06580	0.77	+1.4
1,370,138	-		IAI47_06580	0.77	-0.4
1,370,138	-		IAI47_06580	0.77	+0.1
1,370,151	+		IAI47_06580	0.78	+1.1
1,370,164	+		IAI47_06580	0.79	+0.5
1,370,164	+		IAI47_06580	0.79	-0.8
1,370,165	-		IAI47_06580	0.79	+1.7
1,370,165	-		IAI47_06580	0.79	-1.8
1,370,308	+		IAI47_06580	0.87	+1.8
1,370,309	-		IAI47_06580	0.87	+0.6
1,370,325	+		IAI47_06580	0.88	-1.0
1,370,335	-		IAI47_06580	0.88	-1.8
1,370,335	-		IAI47_06580	0.88	+1.6
1,370,338	+		IAI47_06580	0.88	-0.7
1,370,338	+		IAI47_06580	0.88	+0.3
1,370,338	+		IAI47_06580	0.88	+1.2
1,370,339	-		IAI47_06580	0.89	+0.6
1,370,339	-		IAI47_06580	0.89	-0.9
1,370,339	-		IAI47_06580	0.89	+1.3
1,370,339	-		IAI47_06580	0.89	+1.1
1,370,339	-		IAI47_06580	0.89	+1.5
1,370,339	-		IAI47_06580	0.89	-1.4
1,370,526	-				-2.9
1,370,526	-				-0.8
1,370,530	+				+0.5
1,370,530	+				+3.0
1,370,530	+				-1.4
1,370,530	+				+0.1
1,370,531	-				-0.0
1,370,531	-				+1.9
1,370,556	+				-0.4
1,370,557	-				+0.5
1,370,557	-				-1.1
1,370,570	+				+1.2
1,370,570	+				+0.4
1,370,570	+				+0.3
1,370,570	+				+0.4
1,370,570	+				+0.4
1,370,588	+				+0.1
1,370,589	-				-0.2
1,370,620	+				-0.2
1,370,622	+				+1.1
1,370,622	+				+1.5
1,370,623	-				-0.3
1,370,623	-				-1.9
1,370,623	-				-3.2
1,370,623	-				-0.0
1,370,623	-				+1.2
1,370,623	-				+0.2
1,370,623	-				+4.2
1,370,623	-				-1.2
1,370,623	-				+0.8
1,370,839	+		IAI47_06585	0.20	-1.0
1,370,839	+		IAI47_06585	0.20	+0.6
1,370,840	-		IAI47_06585	0.20	-2.3
1,370,840	-		IAI47_06585	0.20	+0.8
1,370,840	-		IAI47_06585	0.20	-1.1
1,370,853	-		IAI47_06585	0.22	-0.4
1,370,853	-		IAI47_06585	0.22	+0.8
1,370,853	-		IAI47_06585	0.22	+2.3
1,370,883	+		IAI47_06585	0.26	+1.3
1,370,883	+		IAI47_06585	0.26	-1.3
1,370,905	+		IAI47_06585	0.29	-1.2
1,370,906	-		IAI47_06585	0.29	-0.8
1,370,906	-		IAI47_06585	0.29	+1.5
1,370,947	+		IAI47_06585	0.35	-1.4
1,370,947	+		IAI47_06585	0.35	-1.6
1,370,948	-		IAI47_06585	0.35	+2.0
1,370,948	-		IAI47_06585	0.35	+1.2
1,370,948	-		IAI47_06585	0.35	-0.5
1,370,948	-		IAI47_06585	0.35	+0.4
1,370,948	-		IAI47_06585	0.35	+0.2
1,371,057	+		IAI47_06585	0.50	-0.0
1,371,057	+		IAI47_06585	0.50	-2.4
1,371,058	-		IAI47_06585	0.50	-0.3
1,371,088	+		IAI47_06585	0.55	-0.6
1,371,088	+		IAI47_06585	0.55	+0.9
1,371,089	-		IAI47_06585	0.55	+1.1
1,371,089	-		IAI47_06585	0.55	-0.4
1,371,124	-		IAI47_06585	0.60	+0.6
1,371,138	+		IAI47_06585	0.62	+1.3
1,371,138	+		IAI47_06585	0.62	+1.7
1,371,201	+		IAI47_06585	0.70	+0.2
1,371,349	+				+2.3
1,371,349	+				+2.5
1,371,350	-				-0.1
1,371,381	+				-1.9
1,371,381	+				+2.3
1,371,381	+				+0.5
1,371,381	+				+0.1
1,371,516	+				+1.8