Strain Fitness in Pantoea sp. MT58 around IAI47_06080

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,236,252	+		IAI47_06070	0.74	-0.4
1,236,252	+		IAI47_06070	0.74	+1.2
1,236,253	-		IAI47_06070	0.74	-2.6
1,236,277	-		IAI47_06070	0.78	-2.6
1,236,332	+		IAI47_06070	0.86	-1.1
1,236,332	+		IAI47_06070	0.86	+1.9
1,236,352	+		IAI47_06070	0.89	-0.1
1,236,352	+		IAI47_06070	0.89	-0.4
1,236,352	+		IAI47_06070	0.89	+1.1
1,236,352	+		IAI47_06070	0.89	-1.1
1,236,352	+		IAI47_06070	0.89	+0.5
1,236,353	-		IAI47_06070	0.90	-0.3
1,236,433	+				+1.0
1,236,443	+				+0.4
1,236,443	+				-1.5
1,236,443	+				-0.0
1,236,443	+				+1.1
1,236,443	+				-1.3
1,236,444	-				+0.1
1,236,444	-				-0.1
1,236,444	-				+0.4
1,236,466	+				+1.1
1,236,466	+				+1.3
1,236,472	+				-1.6
1,236,473	-				+0.2
1,236,488	+				+1.9
1,236,488	+				+0.3
1,236,488	+				-0.4
1,236,488	+				-1.1
1,236,488	+				+0.7
1,236,488	+				+0.6
1,236,489	-				-0.0
1,236,489	-				+0.6
1,236,503	-				-2.8
1,236,503	-				-0.9
1,236,503	-				-0.7
1,236,503	-				+0.5
1,236,503	-				-0.6
1,236,615	+		IAI47_06075	0.17	+0.9
1,236,615	+		IAI47_06075	0.17	+0.0
1,236,615	+		IAI47_06075	0.17	+0.7
1,236,615	+		IAI47_06075	0.17	+0.8
1,236,630	+		IAI47_06075	0.19	+0.7
1,236,630	+		IAI47_06075	0.19	+1.3
1,236,631	-		IAI47_06075	0.19	-0.6
1,236,660	+		IAI47_06075	0.23	-1.1
1,236,660	+		IAI47_06075	0.23	-1.1
1,236,660	+		IAI47_06075	0.23	-2.3
1,236,660	+		IAI47_06075	0.23	+0.4
1,236,660	+		IAI47_06075	0.23	-0.4
1,236,660	+		IAI47_06075	0.23	+0.1
1,236,660	+		IAI47_06075	0.23	+1.3
1,236,661	-		IAI47_06075	0.23	-1.6
1,236,661	-		IAI47_06075	0.23	+0.8
1,236,661	-		IAI47_06075	0.23	-1.1
1,236,661	-		IAI47_06075	0.23	+1.9
1,236,661	-		IAI47_06075	0.23	-0.2
1,236,661	-		IAI47_06075	0.23	+1.1
1,236,661	-		IAI47_06075	0.23	+1.8
1,236,661	-		IAI47_06075	0.23	-1.8
1,236,661	-		IAI47_06075	0.23	-1.9
1,236,699	+		IAI47_06075	0.28	-2.4
1,236,700	-		IAI47_06075	0.28	+1.4
1,236,700	-		IAI47_06075	0.28	-0.8
1,236,700	-		IAI47_06075	0.28	-1.0
1,236,700	-		IAI47_06075	0.28	-0.9
1,236,803	+		IAI47_06075	0.42	+0.4
1,236,803	+		IAI47_06075	0.42	-0.1
1,236,803	+		IAI47_06075	0.42	-0.7
1,236,803	+		IAI47_06075	0.42	+3.3
1,236,803	+		IAI47_06075	0.42	+2.9
1,236,804	-		IAI47_06075	0.43	+1.7
1,236,889	+		IAI47_06075	0.54	+1.2
1,236,889	+		IAI47_06075	0.54	-1.4
1,236,889	+		IAI47_06075	0.54	+0.5
1,236,890	-		IAI47_06075	0.54	-0.6
1,236,890	-		IAI47_06075	0.54	-0.8
1,236,890	-		IAI47_06075	0.54	+0.6
1,236,903	+		IAI47_06075	0.56	+2.5
1,236,903	+		IAI47_06075	0.56	-0.2
1,236,903	+		IAI47_06075	0.56	-0.9
1,236,903	+		IAI47_06075	0.56	+2.0
1,236,903	+		IAI47_06075	0.56	+0.7
1,236,903	+		IAI47_06075	0.56	-0.8
1,236,903	+		IAI47_06075	0.56	-1.8
1,236,903	+		IAI47_06075	0.56	+0.4
1,236,904	-		IAI47_06075	0.56	-0.8
1,236,904	-		IAI47_06075	0.56	-1.1
1,236,904	-		IAI47_06075	0.56	+1.4
1,236,904	-		IAI47_06075	0.56	-0.1
1,236,904	-		IAI47_06075	0.56	-1.7
1,236,904	-		IAI47_06075	0.56	+1.2
1,236,904	-		IAI47_06075	0.56	-1.2
1,236,904	-		IAI47_06075	0.56	-1.4
1,236,904	-		IAI47_06075	0.56	-2.3
1,236,905	+		IAI47_06075	0.56	-0.0
1,236,905	+		IAI47_06075	0.56	+0.0
1,236,905	+		IAI47_06075	0.56	-1.2
1,236,924	+		IAI47_06075	0.59	+0.2
1,236,924	+		IAI47_06075	0.59	-0.0
1,237,117	-		IAI47_06075	0.85	+0.4
1,237,131	-		IAI47_06075	0.87	+2.4
1,237,131	-		IAI47_06075	0.87	-2.3
1,237,131	-		IAI47_06075	0.87	+0.6
1,237,131	-		IAI47_06075	0.87	+2.1
1,237,157	+				+0.3
1,237,274	+		IAI47_06080	0.21	-2.2
1,237,283	+		IAI47_06080	0.24	+0.4
1,237,283	+		IAI47_06080	0.24	+1.3
1,237,283	+		IAI47_06080	0.24	+1.3
1,237,283	+		IAI47_06080	0.24	+0.9
1,237,284	-		IAI47_06080	0.25	+0.3
1,237,284	-		IAI47_06080	0.25	-0.6
1,237,339	+		IAI47_06080	0.48	+3.7
1,237,339	+		IAI47_06080	0.48	-0.7
1,237,339	+		IAI47_06080	0.48	+0.7
1,237,348	-		IAI47_06080	0.52	+0.4
1,237,483	+				+0.4
1,237,537	+		IAI47_06085	0.17	-1.6
1,237,537	+		IAI47_06085	0.17	+0.9
1,237,537	+		IAI47_06085	0.17	+0.6
1,237,537	+		IAI47_06085	0.17	+0.0
1,237,537	+		IAI47_06085	0.17	+1.3
1,237,537	+		IAI47_06085	0.17	-0.2
1,237,538	-		IAI47_06085	0.17	-0.2
1,237,538	-		IAI47_06085	0.17	+0.7
1,237,538	-		IAI47_06085	0.17	+0.2
1,237,538	-		IAI47_06085	0.17	-0.9
1,237,538	-		IAI47_06085	0.17	+1.6
1,237,567	+		IAI47_06085	0.23	-0.3
1,237,567	+		IAI47_06085	0.23	-2.0
1,237,567	+		IAI47_06085	0.23	+0.8
1,237,567	+		IAI47_06085	0.23	+0.8
1,237,567	+		IAI47_06085	0.23	-0.4
1,237,567	+		IAI47_06085	0.23	-0.1
1,237,567	+		IAI47_06085	0.23	+1.3
1,237,567	+		IAI47_06085	0.23	-1.3
1,237,567	+		IAI47_06085	0.23	+1.0
1,237,568	-		IAI47_06085	0.23	-1.1
1,237,568	-		IAI47_06085	0.23	+2.2
1,237,568	-		IAI47_06085	0.23	+1.7
1,237,570	-		IAI47_06085	0.23	-0.1
1,237,570	-		IAI47_06085	0.23	+0.0
1,237,589	-		IAI47_06085	0.27	+0.6
1,237,708	+		IAI47_06085	0.52	+0.3
1,237,708	+		IAI47_06085	0.52	-0.6
1,237,708	+		IAI47_06085	0.52	+3.4
1,237,709	-		IAI47_06085	0.52	+0.0
1,237,709	-		IAI47_06085	0.52	+1.2
1,237,709	-		IAI47_06085	0.52	-3.1
1,237,856	-		IAI47_06085	0.82	+0.3
1,237,856	-		IAI47_06085	0.82	-1.4
1,237,856	-		IAI47_06085	0.82	-0.5
1,237,856	-		IAI47_06085	0.82	+0.3
1,237,856	-		IAI47_06085	0.82	+0.8
1,237,857	+		IAI47_06085	0.83	+0.5
1,237,857	+		IAI47_06085	0.83	-1.2
1,237,857	+		IAI47_06085	0.83	+1.3
1,237,858	-		IAI47_06085	0.83	+0.9
1,237,858	-		IAI47_06085	0.83	-0.2
1,237,915	+				+0.2
1,237,916	-				+1.0
1,237,929	+				-0.9
1,237,929	+				-2.7
1,237,930	-				-0.5
1,238,004	+				-0.2
1,238,004	+				+1.4
1,238,004	+				+1.3
1,238,004	+				+1.6
1,238,084	+				-0.1
1,238,085	-				-0.8
1,238,085	-				+0.6
1,238,120	+				-0.4
1,238,120	+				-1.1
1,238,121	-				+0.5
1,238,135	+		IAI47_06090	0.10	-3.0
1,238,135	+		IAI47_06090	0.10	+1.5
1,238,136	-		IAI47_06090	0.10	-1.9
1,238,136	-		IAI47_06090	0.10	-2.1
1,238,145	+		IAI47_06090	0.11	+3.0
1,238,145	+		IAI47_06090	0.11	-1.1
1,238,145	+		IAI47_06090	0.11	-1.9
1,238,145	+		IAI47_06090	0.11	+2.0
1,238,145	+		IAI47_06090	0.11	+0.8
1,238,146	-		IAI47_06090	0.11	+0.5
1,238,146	-		IAI47_06090	0.11	+1.2
1,238,146	-		IAI47_06090	0.11	-0.7
1,238,146	-		IAI47_06090	0.11	-0.6
1,238,146	-		IAI47_06090	0.11	-0.3
1,238,162	+		IAI47_06090	0.11	+2.8
1,238,162	+		IAI47_06090	0.11	-0.9
1,238,163	-		IAI47_06090	0.11	-2.4
1,238,163	-		IAI47_06090	0.11	-1.9
1,238,163	-		IAI47_06090	0.11	+0.3
1,238,181	+		IAI47_06090	0.12	-0.8
1,238,182	-		IAI47_06090	0.12	-1.6
1,238,182	-		IAI47_06090	0.12	+1.4
1,238,273	-		IAI47_06090	0.17	+1.7
1,238,286	-		IAI47_06090	0.18	+0.1
1,238,355	-		IAI47_06090	0.21	+0.3
1,238,404	+		IAI47_06090	0.24	+1.9