Strain Fitness in Pantoea sp. MT58 around IAI47_19170

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
60,023	+				-0.8
60,024	-				+0.4
60,024	-				-0.6
60,056	+				-0.2
60,056	+				-0.1
60,057	-				+0.6
60,057	-				-1.3
60,057	-				-0.3
60,103	+				+1.5
60,103	+				-1.4
60,103	+				-1.3
60,103	+				-1.0
60,103	+				-0.9
60,103	+				-0.6
60,103	+				-0.5
60,103	+				+0.7
60,103	+				+0.0
60,103	+				+0.3
60,103	+				-1.9
60,103	+				+0.9
60,104	-				+0.3
60,104	-				-0.9
60,104	-				+0.1
60,104	-				-0.3
60,104	-				-0.4
60,104	-				+0.9
60,104	-				+1.4
60,104	-				-0.3
60,104	-				-0.2
60,105	+				-0.3
60,105	+				-1.7
60,105	+				+0.4
60,105	+				-0.8
60,105	+				-0.7
60,105	+				-0.9
60,105	+				-1.7
60,105	+				+2.5
60,105	+				-2.1
60,105	+				-1.0
60,105	+				+0.3
60,105	+				+3.6
60,105	+				+0.4
60,105	+				+1.1
60,106	-				-0.7
60,106	-				-0.4
60,106	-				-0.7
60,106	-				+1.5
60,106	-				-1.1
60,106	-				+1.0
60,106	-				+0.6
60,106	-				+0.2
60,106	-				+0.6
60,106	-				+0.4
60,106	-				-0.3
60,106	-				+0.2
60,106	-				-0.5
60,114	+				+0.1
60,114	+				-0.5
60,115	-				+0.2
60,115	-				+0.7
60,115	-				+0.4
60,115	-				+0.6
60,115	-				-1.5
60,125	+				-0.3
60,126	-				-1.3
60,126	-				+0.2
60,128	+				+0.3
60,128	+				+0.1
60,128	+				+1.7
60,128	+				+1.3
60,128	+				-0.6
60,128	+				+1.3
60,129	-				+1.6
60,129	-				-0.1
60,129	-				+0.6
60,129	-				+0.7
60,132	-				+0.5
60,164	+				-0.1
60,165	-				+0.3
60,165	-				-0.4
60,165	-				+0.5
60,165	-				-0.3
60,175	-				-0.1
60,175	-				-0.2
60,226	-		IAI47_19165	0.11	+1.1
60,238	-		IAI47_19165	0.13	+0.2
60,241	+		IAI47_19165	0.14	-0.9
60,241	+		IAI47_19165	0.14	-0.7
60,241	+		IAI47_19165	0.14	+0.5
60,242	-		IAI47_19165	0.14	-0.7
60,242	-		IAI47_19165	0.14	+0.5
60,242	-		IAI47_19165	0.14	+0.0
60,242	-		IAI47_19165	0.14	-1.0
60,242	-		IAI47_19165	0.14	+0.0
60,242	-		IAI47_19165	0.14	-1.6
60,278	+		IAI47_19165	0.19	+0.3
60,279	-		IAI47_19165	0.20	+0.4
60,279	-		IAI47_19165	0.20	-0.8
60,287	+		IAI47_19165	0.21	+0.5
60,287	+		IAI47_19165	0.21	-0.9
60,287	+		IAI47_19165	0.21	+0.3
60,287	+		IAI47_19165	0.21	+2.7
60,288	-		IAI47_19165	0.21	+1.3
60,288	-		IAI47_19165	0.21	-1.7
60,288	-		IAI47_19165	0.21	+0.3
60,288	-		IAI47_19165	0.21	-1.4
60,291	+		IAI47_19165	0.22	+0.3
60,291	+		IAI47_19165	0.22	+0.5
60,291	+		IAI47_19165	0.22	-0.8
60,291	+		IAI47_19165	0.22	-0.2
60,291	+		IAI47_19165	0.22	+0.7
60,292	-		IAI47_19165	0.22	-1.2
60,292	-		IAI47_19165	0.22	+0.6
60,292	-		IAI47_19165	0.22	-2.1
60,292	-		IAI47_19165	0.22	+0.4
60,354	+		IAI47_19165	0.31	+0.5
60,358	+		IAI47_19165	0.32	+0.3
60,358	+		IAI47_19165	0.32	-0.9
60,358	+		IAI47_19165	0.32	-0.2
60,359	-		IAI47_19165	0.32	+0.2
60,359	-		IAI47_19165	0.32	+0.1
60,359	-		IAI47_19165	0.32	-1.3
60,359	-		IAI47_19165	0.32	+1.5
60,359	-		IAI47_19165	0.32	-1.0
60,359	-		IAI47_19165	0.32	-0.4
60,359	-		IAI47_19165	0.32	-0.9
60,360	+		IAI47_19165	0.32	+0.2
60,360	+		IAI47_19165	0.32	+0.3
60,361	-		IAI47_19165	0.33	-0.9
60,361	-		IAI47_19165	0.33	-0.7
60,361	-		IAI47_19165	0.33	+0.0
60,362	+		IAI47_19165	0.33	+1.1
60,362	+		IAI47_19165	0.33	+1.4
60,363	-		IAI47_19165	0.33	-0.5
60,420	+		IAI47_19165	0.42	+1.1
60,420	+		IAI47_19165	0.42	+0.7
60,420	+		IAI47_19165	0.42	-1.5
60,420	+		IAI47_19165	0.42	-1.4
60,421	-		IAI47_19165	0.42	+0.7
60,421	-		IAI47_19165	0.42	-0.2
60,470	-		IAI47_19165	0.50	+0.5
60,491	+		IAI47_19165	0.53	+0.9
60,491	+		IAI47_19165	0.53	-1.0
60,491	+		IAI47_19165	0.53	-0.2
60,491	+		IAI47_19165	0.53	-0.5
60,492	-		IAI47_19165	0.53	-2.5
60,492	-		IAI47_19165	0.53	+0.5
60,492	-		IAI47_19165	0.53	+0.9
60,492	-		IAI47_19165	0.53	-1.9
60,492	-		IAI47_19165	0.53	+1.3
60,492	-		IAI47_19165	0.53	+0.4
60,492	-		IAI47_19165	0.53	+0.0
60,494	+		IAI47_19165	0.53	+0.1
60,494	+		IAI47_19165	0.53	+2.4
60,494	+		IAI47_19165	0.53	+1.0
60,494	+		IAI47_19165	0.53	-1.1
60,495	-		IAI47_19165	0.54	-0.5
60,495	-		IAI47_19165	0.54	+0.2
60,495	-		IAI47_19165	0.54	-0.9
60,576	+		IAI47_19165	0.66	+1.2
60,576	+		IAI47_19165	0.66	-0.7
60,577	-		IAI47_19165	0.67	+1.8
60,582	+		IAI47_19165	0.67	+0.6
60,582	+		IAI47_19165	0.67	+0.1
60,589	+		IAI47_19165	0.68	-0.4
60,590	-		IAI47_19165	0.69	-0.9
60,590	-		IAI47_19165	0.69	+0.7
60,590	-		IAI47_19165	0.69	+0.5
60,592	+		IAI47_19165	0.69	+0.3
60,592	+		IAI47_19165	0.69	-0.0
60,592	+		IAI47_19165	0.69	+1.4
60,593	-		IAI47_19165	0.69	+0.0
60,593	-		IAI47_19165	0.69	+0.8
60,621	+		IAI47_19165	0.73	-1.9
60,621	+		IAI47_19165	0.73	+0.3
60,628	+		IAI47_19165	0.75	+0.6
60,628	+		IAI47_19165	0.75	+0.6
60,628	+		IAI47_19165	0.75	-1.0
60,629	-		IAI47_19165	0.75	+0.9
60,636	+		IAI47_19165	0.76	-0.5
60,636	+		IAI47_19165	0.76	-0.3
60,636	+		IAI47_19165	0.76	+0.5
60,636	+		IAI47_19165	0.76	-0.3
60,636	+		IAI47_19165	0.76	-1.0
60,637	-		IAI47_19165	0.76	+0.2
60,637	-		IAI47_19165	0.76	+0.7
60,637	-		IAI47_19165	0.76	+1.6
60,665	+		IAI47_19165	0.80	-1.5
60,665	+		IAI47_19165	0.80	-0.3
60,682	+		IAI47_19165	0.83	+4.7
60,684	+		IAI47_19165	0.83	+1.5
60,684	+		IAI47_19165	0.83	+1.1
60,684	+		IAI47_19165	0.83	+1.8
60,685	-		IAI47_19165	0.83	-0.6
60,685	-		IAI47_19165	0.83	+1.7
60,685	-		IAI47_19165	0.83	+0.2
60,685	-		IAI47_19165	0.83	-1.8
60,685	-		IAI47_19165	0.83	+0.1
60,712	+		IAI47_19165	0.88	+1.5
60,713	-		IAI47_19165	0.88	+1.9
60,758	+				-1.0
60,758	+				+0.2
60,758	+				-0.1
60,758	+				+1.9
60,759	-				+0.3
60,773	+				-0.5
60,774	-				-1.5
60,774	-				+0.9
60,774	-				+0.4
60,783	+				+0.5
60,784	-				-0.5
60,786	-				+0.6
60,786	-				-0.4
60,786	-				-1.6
60,792	+				+0.8
60,792	+				+0.3
60,793	-				-0.4
60,797	-				+1.6
60,797	-				-0.1
60,797	-				+1.3
60,812	-				-0.4
60,819	+				+0.3
60,819	+				-0.5
60,828	+				+0.1
60,828	+				+0.1
60,829	-				+0.3
60,829	-				+0.5
60,831	-				-0.2
60,880	-				-2.1
60,912	-				+0.5
60,917	+				-0.9
60,918	-				-1.9
60,918	-				+1.0
60,922	+				+1.0
60,922	+				+0.9
60,922	+				+0.3
60,923	-				-0.7
60,930	+				+0.5
60,930	+				+1.1
60,931	-				+0.1
60,931	-				-0.9
60,977	+				-0.1
60,978	-				-1.3
60,985	-				-0.5
60,985	-				+2.7
60,985	-				+0.5
61,003	+				-1.9
61,003	+				+0.3
61,004	-				+0.7
61,004	-				-1.1
61,017	+				+1.5
61,018	-				-0.5
61,020	+				+1.1
61,038	+				+0.7
61,038	+				-0.1
61,039	-				-0.3
61,039	-				-1.4
61,044	+				+1.4
61,044	+				+0.1
61,045	-				-0.5
61,045	-				+0.7
61,087	+				-1.2
61,094	+				-1.4
61,094	+				-1.6
61,094	+				-0.8
61,094	+				-2.1
61,094	+				-2.3
61,094	+				-0.3
61,094	+				+0.7
61,094	+				-2.2
61,095	-				-0.3
61,095	-				-0.0
61,095	-				-0.5
61,095	-				+2.1
61,095	-				-0.7
61,139	+		IAI47_19170	0.11	-0.2
61,140	-		IAI47_19170	0.11	+1.2
61,164	+		IAI47_19170	0.13	-0.7
61,164	+		IAI47_19170	0.13	+0.6
61,170	+		IAI47_19170	0.14	-0.6
61,170	+		IAI47_19170	0.14	+0.1
61,171	-		IAI47_19170	0.14	+0.2
61,219	-		IAI47_19170	0.18	+0.0
61,233	+		IAI47_19170	0.19	+1.2
61,306	+		IAI47_19170	0.25	+1.3
61,307	-		IAI47_19170	0.25	-1.0
61,353	+		IAI47_19170	0.29	+0.6
61,353	+		IAI47_19170	0.29	-0.2
61,354	-		IAI47_19170	0.29	-0.5
61,355	+		IAI47_19170	0.29	-0.8
61,355	+		IAI47_19170	0.29	-1.1
61,355	+		IAI47_19170	0.29	-0.8
61,355	+		IAI47_19170	0.29	-0.3
61,356	-		IAI47_19170	0.29	+1.8
61,356	-		IAI47_19170	0.29	-1.2
61,356	-		IAI47_19170	0.29	+0.3
61,444	-		IAI47_19170	0.37	-1.2
61,453	+		IAI47_19170	0.38	-0.3
61,453	+		IAI47_19170	0.38	-1.1
61,453	+		IAI47_19170	0.38	+0.5
61,453	+		IAI47_19170	0.38	-0.0
61,454	-		IAI47_19170	0.38	+0.1
61,454	-		IAI47_19170	0.38	-0.2
61,454	-		IAI47_19170	0.38	-0.7
61,454	-		IAI47_19170	0.38	-1.1
61,476	+		IAI47_19170	0.40	+0.9
61,517	+		IAI47_19170	0.43	-1.4
61,517	+		IAI47_19170	0.43	-0.3
61,518	-		IAI47_19170	0.43	-0.1
61,518	-		IAI47_19170	0.43	-0.9
61,525	+		IAI47_19170	0.44	+0.5
61,525	+		IAI47_19170	0.44	-0.2
61,525	+		IAI47_19170	0.44	+0.5
61,525	+		IAI47_19170	0.44	-1.4
61,525	+		IAI47_19170	0.44	+1.4
61,525	+		IAI47_19170	0.44	+0.8
61,525	+		IAI47_19170	0.44	-0.9
61,525	+		IAI47_19170	0.44	-1.2
61,525	+		IAI47_19170	0.44	+2.2
61,526	-		IAI47_19170	0.44	+0.8
61,526	-		IAI47_19170	0.44	-0.0
61,526	-		IAI47_19170	0.44	-0.4
61,526	-		IAI47_19170	0.44	+2.2
61,526	-		IAI47_19170	0.44	-0.9
61,526	-		IAI47_19170	0.44	+1.7
61,526	-		IAI47_19170	0.44	-1.6
61,552	+		IAI47_19170	0.46	+0.1
61,553	-		IAI47_19170	0.46	-1.1
61,553	-		IAI47_19170	0.46	+1.2
61,553	-		IAI47_19170	0.46	-0.1
61,617	+		IAI47_19170	0.52	+0.2
61,625	-		IAI47_19170	0.52	+0.1
61,662	+		IAI47_19170	0.55	+2.2
61,662	+		IAI47_19170	0.55	-1.9
61,662	+		IAI47_19170	0.55	-0.5
61,663	-		IAI47_19170	0.55	+1.0
61,663	-		IAI47_19170	0.55	-1.0
61,664	+		IAI47_19170	0.56	-1.6
61,665	-		IAI47_19170	0.56	-2.2
61,665	-		IAI47_19170	0.56	+2.0
61,665	-		IAI47_19170	0.56	-0.2
61,681	+		IAI47_19170	0.57	+1.2
61,682	-		IAI47_19170	0.57	-0.2
61,682	-		IAI47_19170	0.57	-0.0
61,682	-		IAI47_19170	0.57	-1.0
61,698	+		IAI47_19170	0.58	-0.2
61,699	-		IAI47_19170	0.59	+0.9
61,714	-		IAI47_19170	0.60	+0.5
61,717	+		IAI47_19170	0.60	+0.6
61,717	+		IAI47_19170	0.60	+0.7
61,718	-		IAI47_19170	0.60	+0.2
61,731	+		IAI47_19170	0.61	-0.9
61,731	+		IAI47_19170	0.61	+2.2
61,742	+		IAI47_19170	0.62	-1.6
61,743	-		IAI47_19170	0.62	-0.3
61,743	-		IAI47_19170	0.62	-1.2
61,756	-		IAI47_19170	0.63	-0.7
61,840	-		IAI47_19170	0.70	-0.1
61,875	+		IAI47_19170	0.73	+0.5
61,875	+		IAI47_19170	0.73	-1.2
61,876	-		IAI47_19170	0.74	-0.5
61,876	-		IAI47_19170	0.74	-1.7
61,917	+		IAI47_19170	0.77	+1.2
61,917	+		IAI47_19170	0.77	+0.1
61,917	+		IAI47_19170	0.77	-0.3
61,917	+		IAI47_19170	0.77	-0.1
61,917	+		IAI47_19170	0.77	+0.2
61,917	+		IAI47_19170	0.77	+0.3
61,918	-		IAI47_19170	0.77	-0.8
61,918	-		IAI47_19170	0.77	-0.8
61,918	-		IAI47_19170	0.77	-1.3
61,918	-		IAI47_19170	0.77	-1.0
61,918	-		IAI47_19170	0.77	+0.9
61,918	-		IAI47_19170	0.77	-1.0
62,013	+		IAI47_19170	0.85	-0.6
62,019	+		IAI47_19170	0.86	+0.2
62,019	+		IAI47_19170	0.86	+2.0
62,019	+		IAI47_19170	0.86	+0.1
62,019	+		IAI47_19170	0.86	+0.1
62,020	-		IAI47_19170	0.86	-1.9
62,020	-		IAI47_19170	0.86	-1.9
62,022	-		IAI47_19170	0.86	+0.0
62,043	+		IAI47_19170	0.88	+0.1
62,043	+		IAI47_19170	0.88	+2.5
62,044	-		IAI47_19170	0.88	-0.4
62,104	+				+0.5
62,104	+				-1.7
62,104	+				+0.5
62,115	+				+0.3
62,115	+				-0.5
62,115	+				+1.1
62,116	-				+0.3
62,137	+				+0.5
62,137	+				-1.0
62,138	-				-0.8
62,138	-				+0.1
62,141	+				-1.6
62,179	+				+0.2
62,187	+				+1.5
62,197	+				+0.3
62,197	+				-2.3
62,197	+				-0.2
62,197	+				-0.1
62,198	-				-1.1
62,198	-				-0.5
62,198	-				+2.0
62,198	-				+0.4
62,198	-				+0.9
62,201	+				-0.9
62,201	+				+1.3
62,201	+				-1.2
62,201	+				-0.1
62,201	+				-0.7
62,201	+				+0.5
62,201	+				-0.5
62,201	+				+1.1
62,202	-				-0.9
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