Strain Fitness in Pantoea sp. MT58 around IAI47_18895

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
15,231	+		IAI47_18890	0.80	-0.7
15,231	+		IAI47_18890	0.80	+0.9
15,232	-		IAI47_18890	0.80	-0.9
15,239	+		IAI47_18890	0.80	-0.8
15,353	+		IAI47_18890	0.83	+0.5
15,573	+		IAI47_18890	0.88	-0.3
15,573	+		IAI47_18890	0.88	+1.0
15,573	+		IAI47_18890	0.88	-1.1
15,573	+		IAI47_18890	0.88	+0.5
15,574	-		IAI47_18890	0.88	+0.8
15,574	-		IAI47_18890	0.88	+0.6
15,574	-		IAI47_18890	0.88	-1.0
15,574	-		IAI47_18890	0.88	-1.1
15,574	-		IAI47_18890	0.88	+0.5
15,586	-		IAI47_18890	0.88	+0.3
15,687	+				-0.8
15,687	+				-1.8
15,734	+				-1.2
15,734	+				+1.5
15,734	+				-1.8
15,735	-				-0.4
15,735	-				-1.4
15,845	+				+1.8
15,845	+				+0.1
15,845	+				-0.4
15,846	-				-0.3
15,846	-				+0.0
15,846	-				-0.9
15,846	-				-1.1
15,846	-				-0.2
15,846	-				+0.3
15,846	-				+0.5
15,846	-				-0.0
15,846	-				-0.5
15,847	+				-0.1
15,847	+				+1.2
15,847	+				-0.7
15,847	+				-1.1
15,847	+				+1.5
15,847	+				+0.1
15,847	+				-0.4
15,847	+				+2.0
15,847	+				-1.3
15,847	+				-0.5
15,848	-				-0.3
15,848	-				+0.3
15,848	-				+0.1
15,848	-				-2.5
15,848	-				-1.3
15,848	-				+0.3
15,848	-				-1.5
15,852	+				+1.3
16,015	-				+0.1
16,015	-				+0.5
16,077	+				+1.5
16,077	+				-1.9
16,109	+				-2.3
16,109	+				+1.3
16,109	+				+1.0
16,109	+				-0.7
16,109	+				+1.4
16,110	-				-0.4
16,110	-				+0.6
16,110	-				-1.4
16,110	-				-0.3
16,110	-				-0.1
16,118	+				+1.7
16,119	-				-1.5
16,121	+				+1.1
16,121	+				-0.1
16,122	-				+0.1
16,122	-				+1.5
16,158	+				-1.5
16,281	+				+0.9
16,281	+				+0.5
16,282	-				+1.9
16,282	-				+1.8
16,295	+				+0.9
16,295	+				-1.0
16,296	-				-0.4
16,350	+		IAI47_18895	0.11	-0.5
16,351	-		IAI47_18895	0.12	+0.1
16,374	-		IAI47_18895	0.13	-0.0
16,374	-		IAI47_18895	0.13	-1.6
16,434	+		IAI47_18895	0.19	-0.6
16,434	+		IAI47_18895	0.19	-0.8
16,500	-		IAI47_18895	0.24	+0.4
16,515	+		IAI47_18895	0.25	-2.6
16,515	+		IAI47_18895	0.25	+0.8
16,516	-		IAI47_18895	0.25	-0.3
16,540	+		IAI47_18895	0.27	-1.1
16,570	-		IAI47_18895	0.30	-1.3
16,579	+		IAI47_18895	0.31	+0.0
16,579	+		IAI47_18895	0.31	+0.5
16,579	+		IAI47_18895	0.31	-0.7
16,580	-		IAI47_18895	0.31	+0.1
16,580	-		IAI47_18895	0.31	-0.1
16,597	+		IAI47_18895	0.32	+0.1
16,598	-		IAI47_18895	0.32	-2.8
16,665	+		IAI47_18895	0.38	-1.7
16,665	+		IAI47_18895	0.38	+0.1
16,721	+		IAI47_18895	0.43	-0.5
16,856	-		IAI47_18895	0.54	+0.1
16,891	+		IAI47_18895	0.57	-0.5
16,891	+		IAI47_18895	0.57	-1.1
16,891	+		IAI47_18895	0.57	-0.6
16,891	+		IAI47_18895	0.57	-0.9
16,892	-		IAI47_18895	0.57	+0.4
16,894	+		IAI47_18895	0.57	-1.1
16,894	+		IAI47_18895	0.57	+0.4
16,894	+		IAI47_18895	0.57	+0.7
16,894	+		IAI47_18895	0.57	+1.1
16,895	-		IAI47_18895	0.57	+0.1
16,895	-		IAI47_18895	0.57	-0.0
16,895	-		IAI47_18895	0.57	+0.5
16,895	-		IAI47_18895	0.57	+1.8
16,895	-		IAI47_18895	0.57	+1.0
16,895	-		IAI47_18895	0.57	+0.7
16,907	+		IAI47_18895	0.58	+0.9
16,907	+		IAI47_18895	0.58	-1.9
16,908	-		IAI47_18895	0.58	-0.2
16,908	-		IAI47_18895	0.58	-2.7
16,920	+		IAI47_18895	0.59	+0.7
16,926	-		IAI47_18895	0.60	+1.7
17,020	-		IAI47_18895	0.68	-1.3
17,098	+		IAI47_18895	0.74	-1.3
17,098	+		IAI47_18895	0.74	-1.0
17,098	+		IAI47_18895	0.74	-0.5
17,099	-		IAI47_18895	0.74	+0.1
17,099	-		IAI47_18895	0.74	-1.3
17,134	+		IAI47_18895	0.77	-0.6
17,135	-		IAI47_18895	0.77	+0.5
17,203	-		IAI47_18895	0.83	-0.7
17,240	+		IAI47_18895	0.86	-0.4
17,240	+		IAI47_18895	0.86	-1.3
17,240	+		IAI47_18895	0.86	-1.4
17,240	+		IAI47_18895	0.86	-0.5
17,240	+		IAI47_18895	0.86	-0.2
17,241	-		IAI47_18895	0.86	-0.2
17,241	-		IAI47_18895	0.86	-0.2
17,251	+		IAI47_18895	0.87	+0.0
17,294	+				+0.1
17,294	+				+0.1
17,303	+				+0.9
17,353	-				+0.7
17,358	+				+0.1
17,359	-				-0.6
17,406	+				-0.8
17,446	+				-0.3
17,446	+				-1.1
17,447	-				+0.3
17,447	-				-1.9
17,447	-				+0.9
17,447	-				+0.2
17,447	-				-1.3
17,447	-				-0.6
17,448	+				+2.5
17,448	+				+1.1
17,449	-				-0.9
17,449	-				+0.4
17,504	-				+0.5
17,559	+				+0.1
17,574	+				-1.1
17,574	+				-1.7
17,575	-				+2.0
17,575	-				+0.9
17,575	-				-2.9
17,576	+				-0.1
17,576	+				-0.2
17,576	+				+1.0
17,577	-				-0.1
17,577	-				+1.6
17,641	+				+1.5
17,653	+				-0.3
17,654	-				+0.1
17,654	-				+0.7
17,677	-				+0.5
17,693	+				-1.0
17,694	-				-1.6
17,703	-				-1.1
17,718	+				+0.3
17,718	+				-1.3
17,718	+				-0.7
17,718	+				-1.0
17,718	+				+0.5
17,719	-				+2.1
17,719	-				+0.5
17,729	-				+0.1
17,729	-				-0.1
17,729	-				-0.1
17,729	-				-0.9
17,729	-				+0.1
17,729	-				+0.3
17,739	+		IAI47_18900	0.11	-0.3
17,740	-		IAI47_18900	0.11	+1.1
17,740	-		IAI47_18900	0.11	+0.3
17,761	+		IAI47_18900	0.17	-0.5
17,761	+		IAI47_18900	0.17	-0.4
17,761	+		IAI47_18900	0.17	-0.1
17,761	+		IAI47_18900	0.17	+0.0
17,761	+		IAI47_18900	0.17	-0.8
17,762	-		IAI47_18900	0.17	+0.9
17,762	-		IAI47_18900	0.17	-1.8
17,763	+		IAI47_18900	0.17	+2.0
17,763	+		IAI47_18900	0.17	-0.7
17,763	+		IAI47_18900	0.17	+0.2
17,763	+		IAI47_18900	0.17	-0.4
17,763	+		IAI47_18900	0.17	-0.7
17,764	-		IAI47_18900	0.18	-0.3
17,801	-		IAI47_18900	0.27	-0.5
17,801	-		IAI47_18900	0.27	+0.0
17,832	+		IAI47_18900	0.35	+1.7
17,832	+		IAI47_18900	0.35	-1.1
17,832	+		IAI47_18900	0.35	+1.5
17,833	-		IAI47_18900	0.35	-0.8
17,833	-		IAI47_18900	0.35	+0.8
17,833	-		IAI47_18900	0.35	-1.7
17,834	+		IAI47_18900	0.35	+0.1
17,834	+		IAI47_18900	0.35	+0.5
17,835	-		IAI47_18900	0.36	+2.7
17,835	-		IAI47_18900	0.36	-0.1
17,835	-		IAI47_18900	0.36	+0.1
17,835	-		IAI47_18900	0.36	-1.0
17,883	-		IAI47_18900	0.48	+1.8
17,955	+		IAI47_18900	0.66	-0.8
17,955	+		IAI47_18900	0.66	-0.2
17,955	+		IAI47_18900	0.66	-0.7
17,955	+		IAI47_18900	0.66	-1.9
17,956	-		IAI47_18900	0.66	-0.3
17,956	-		IAI47_18900	0.66	-0.4
17,956	-		IAI47_18900	0.66	+0.0
17,956	-		IAI47_18900	0.66	+2.2
17,956	-		IAI47_18900	0.66	+0.8
18,001	+		IAI47_18900	0.78	+1.2
18,024	+		IAI47_18900	0.84	+0.3
18,043	+		IAI47_18900	0.89	-1.1
18,044	-		IAI47_18900	0.89	-0.3
18,044	-		IAI47_18900	0.89	+0.4
18,049	+				-0.3
18,050	-				+0.1
18,050	-				+0.1
18,084	-				-1.7
18,107	-				+2.5
18,119	+				+0.9
18,120	-				-0.8
18,120	-				-0.3
18,120	-				+0.1
18,120	-				+1.5
18,143	-				-0.2
18,143	-				+0.5
18,249	+		IAI47_18905	0.18	-0.2
18,330	+		IAI47_18905	0.31	+0.1
18,330	+		IAI47_18905	0.31	+0.4
18,375	+		IAI47_18905	0.38	+0.5