Strain Fitness in Pantoea sp. MT58 around IAI47_16945

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,595,946	+		IAI47_16935	0.53	-2.0
3,595,946	+		IAI47_16935	0.53	-0.7
3,595,946	+		IAI47_16935	0.53	+0.4
3,595,946	+		IAI47_16935	0.53	-0.0
3,595,947	-		IAI47_16935	0.53	+1.4
3,595,947	-		IAI47_16935	0.53	+1.0
3,595,980	+		IAI47_16935	0.59	-0.5
3,595,980	+		IAI47_16935	0.59	-0.2
3,595,981	-		IAI47_16935	0.59	-0.9
3,595,981	-		IAI47_16935	0.59	+1.0
3,595,981	-		IAI47_16935	0.59	-0.5
3,596,020	+		IAI47_16935	0.65	+0.1
3,596,020	+		IAI47_16935	0.65	+0.3
3,596,020	+		IAI47_16935	0.65	-2.1
3,596,184	-				-1.0
3,596,207	+				-1.1
3,596,207	+				-0.9
3,596,228	+				-0.3
3,596,228	+				-0.9
3,596,228	+				-0.4
3,596,228	+				-2.1
3,596,257	+				+1.5
3,596,258	-				-0.2
3,596,269	+				-0.4
3,596,270	-				+0.3
3,596,270	-				+3.2
3,596,271	+				+0.8
3,596,271	+				-0.0
3,596,271	+				-1.0
3,596,271	+				+0.2
3,596,271	+				-1.1
3,596,271	+				-0.5
3,596,271	+				+0.7
3,596,271	+				+1.8
3,596,271	+				-2.1
3,596,271	+				-2.0
3,596,272	-				+0.8
3,596,272	-				-1.4
3,596,272	-				+0.2
3,596,272	-				+2.2
3,596,272	-				+0.5
3,596,272	-				-1.6
3,596,272	-				+0.2
3,596,272	-				+1.2
3,596,272	-				-1.1
3,596,272	-				-0.1
3,596,272	-				-0.3
3,596,277	-				-0.2
3,596,283	+				+0.3
3,596,284	-				-0.9
3,596,284	-				+2.2
3,596,333	+				-3.7
3,596,333	+				+0.8
3,596,334	-				+0.3
3,596,334	-				+1.4
3,596,334	-				-1.5
3,596,334	-				+0.6
3,596,334	-				-0.5
3,596,334	-				-1.2
3,596,334	-				-0.2
3,596,334	-				+1.1
3,596,411	-				-0.5
3,596,460	+		IAI47_16940	0.14	+1.9
3,596,461	-		IAI47_16940	0.14	-1.0
3,596,461	-		IAI47_16940	0.14	-0.1
3,596,461	-		IAI47_16940	0.14	-0.0
3,596,461	-		IAI47_16940	0.14	-0.2
3,596,461	-		IAI47_16940	0.14	-1.4
3,596,462	+		IAI47_16940	0.14	-1.3
3,596,462	+		IAI47_16940	0.14	+0.7
3,596,463	-		IAI47_16940	0.14	-1.0
3,596,507	+		IAI47_16940	0.23	-1.1
3,596,516	+		IAI47_16940	0.25	-0.0
3,596,654	+		IAI47_16940	0.51	+0.3
3,596,655	-		IAI47_16940	0.51	-1.0
3,596,655	-		IAI47_16940	0.51	+0.9
3,596,807	+		IAI47_16940	0.80	-0.0
3,596,807	+		IAI47_16940	0.80	+1.3
3,596,808	-		IAI47_16940	0.80	-2.5
3,596,808	-		IAI47_16940	0.80	-1.4
3,596,821	+		IAI47_16940	0.83	-0.2
3,596,821	+		IAI47_16940	0.83	+0.9
3,596,821	+		IAI47_16940	0.83	-1.6
3,596,822	-		IAI47_16940	0.83	-0.0
3,596,831	+		IAI47_16940	0.85	-1.0
3,596,864	-				+0.1
3,596,874	-				+0.7
3,596,992	+		IAI47_16945	0.11	-1.0
3,596,992	+		IAI47_16945	0.11	-0.7
3,596,993	-		IAI47_16945	0.11	-1.8
3,596,993	-		IAI47_16945	0.11	-0.8
3,597,115	+		IAI47_16945	0.40	+0.4
3,597,116	-		IAI47_16945	0.40	+0.5
3,597,130	-		IAI47_16945	0.43	+0.5
3,597,144	-		IAI47_16945	0.46	+0.1
3,597,144	-		IAI47_16945	0.46	+1.5
3,597,273	+		IAI47_16945	0.76	-0.7
3,597,273	+		IAI47_16945	0.76	+1.4
3,597,273	+		IAI47_16945	0.76	-0.1
3,597,273	+		IAI47_16945	0.76	-0.3
3,597,273	+		IAI47_16945	0.76	-0.1
3,597,273	+		IAI47_16945	0.76	-1.0
3,597,273	+		IAI47_16945	0.76	+0.4
3,597,273	+		IAI47_16945	0.76	-0.9
3,597,273	+		IAI47_16945	0.76	+1.2
3,597,274	-		IAI47_16945	0.77	-0.1
3,597,274	-		IAI47_16945	0.77	-0.4
3,597,274	-		IAI47_16945	0.77	-0.7
3,597,274	-		IAI47_16945	0.77	-0.9
3,597,276	+		IAI47_16945	0.77	+0.1
3,597,276	+		IAI47_16945	0.77	-1.9
3,597,276	+		IAI47_16945	0.77	-0.6
3,597,276	+		IAI47_16945	0.77	-1.4
3,597,277	-		IAI47_16945	0.77	+0.2
3,597,277	-		IAI47_16945	0.77	+0.7
3,597,277	-		IAI47_16945	0.77	+3.6
3,597,277	-		IAI47_16945	0.77	-0.3
3,597,277	-		IAI47_16945	0.77	-0.6
3,597,277	-		IAI47_16945	0.77	-0.1
3,597,283	+		IAI47_16945	0.79	-1.4
3,597,284	-		IAI47_16945	0.79	-0.8
3,597,310	+		IAI47_16945	0.85	-2.4
3,597,376	+				-0.3
3,597,376	+				+0.2
3,597,376	+				-0.1
3,597,376	+				+0.2
3,597,377	-				+0.4
3,597,377	-				-0.6
3,597,377	-				+0.2
3,597,377	-				+0.4
3,597,377	-				-1.6
3,597,412	+				-1.2
3,597,413	-				-1.0
3,597,413	-				+0.1
3,597,470	+				+1.2
3,597,470	+				-0.2
3,597,470	+				+1.9
3,597,471	-				-0.4
3,597,471	-				-1.3
3,597,471	-				+0.1
3,597,500	+		IAI47_16950	0.17	+0.3
3,597,500	+		IAI47_16950	0.17	-1.5
3,597,501	-		IAI47_16950	0.18	-1.7
3,597,501	-		IAI47_16950	0.18	+2.1
3,597,644	+		IAI47_16950	0.66	-0.9
3,597,644	+		IAI47_16950	0.66	-0.5
3,597,644	+		IAI47_16950	0.66	+1.6
3,597,645	-		IAI47_16950	0.67	+2.5
3,597,653	-		IAI47_16950	0.69	+0.1
3,597,678	+		IAI47_16950	0.78	-1.9
3,597,678	+		IAI47_16950	0.78	+2.3
3,597,679	-		IAI47_16950	0.78	-0.8
3,597,679	-		IAI47_16950	0.78	-0.1
3,597,724	+				+1.5
3,597,724	+				-0.4
3,597,725	-				-0.0
3,597,727	+				-0.3
3,597,727	+				+0.1
3,597,727	+				+1.4
3,597,728	-				+0.3
3,597,728	-				+0.6
3,597,728	-				-0.0
3,597,728	-				+0.2
3,597,728	-				-0.6
3,597,740	+				+1.3
3,597,740	+				-1.2
3,597,755	-				+0.7
3,597,781	+		IAI47_16955	0.11	-2.2
3,597,781	+		IAI47_16955	0.11	+0.5
3,597,781	+		IAI47_16955	0.11	+0.9
3,597,781	+		IAI47_16955	0.11	+1.3
3,597,782	-		IAI47_16955	0.11	-0.5
3,597,782	-		IAI47_16955	0.11	-1.5
3,597,782	-		IAI47_16955	0.11	+0.5
3,597,802	+		IAI47_16955	0.15	-0.1
3,597,802	+		IAI47_16955	0.15	+1.1
3,597,803	-		IAI47_16955	0.15	-0.7
3,597,803	-		IAI47_16955	0.15	-0.1
3,597,803	-		IAI47_16955	0.15	-0.6
3,597,803	-		IAI47_16955	0.15	-1.8
3,597,850	+		IAI47_16955	0.24	-1.3
3,597,919	+		IAI47_16955	0.38	+0.2
3,597,919	+		IAI47_16955	0.38	-1.1
3,597,952	+		IAI47_16955	0.45	+1.8
3,597,953	-		IAI47_16955	0.45	-0.1
3,597,953	-		IAI47_16955	0.45	+0.6
3,597,953	-		IAI47_16955	0.45	+1.1
3,597,953	-		IAI47_16955	0.45	+0.0
3,597,984	+		IAI47_16955	0.51	+0.2
3,598,067	-		IAI47_16955	0.67	+0.5
3,598,067	-		IAI47_16955	0.67	+1.6
3,598,334	-		IAI47_16960	0.21	-0.9
3,598,334	-		IAI47_16960	0.21	+0.7
3,598,334	-		IAI47_16960	0.21	+0.5
3,598,334	-		IAI47_16960	0.21	-0.6
3,598,348	+		IAI47_16960	0.23	+0.7
3,598,348	+		IAI47_16960	0.23	+0.7
3,598,349	-		IAI47_16960	0.23	-2.3
3,598,349	-		IAI47_16960	0.23	-0.3
3,598,349	-		IAI47_16960	0.23	-2.2
3,598,358	+		IAI47_16960	0.25	+1.5
3,598,358	+		IAI47_16960	0.25	-0.2
3,598,358	+		IAI47_16960	0.25	+0.4
3,598,358	+		IAI47_16960	0.25	-0.0
3,598,359	-		IAI47_16960	0.25	+0.2
3,598,359	-		IAI47_16960	0.25	+0.5
3,598,359	-		IAI47_16960	0.25	+0.6