Strain Fitness in Pantoea sp. MT58 around IAI47_12730

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,678,120	+				-0.5
2,678,120	+				+1.8
2,678,120	+				-0.1
2,678,120	+				+1.0
2,678,121	-				-0.8
2,678,121	-				-1.2
2,678,121	-				-1.3
2,678,122	+				+0.2
2,678,122	+				-0.3
2,678,122	+				+2.1
2,678,123	-				+1.8
2,678,123	-				+0.8
2,678,123	-				+0.6
2,678,123	-				+0.4
2,678,146	+				+1.0
2,678,146	+				+0.1
2,678,146	+				-1.8
2,678,147	-				+0.8
2,678,147	-				-0.1
2,678,176	+				+0.6
2,678,176	+				-0.1
2,678,176	+				+2.1
2,678,176	+				+1.2
2,678,177	-				+0.3
2,678,177	-				+1.3
2,678,177	-				+0.1
2,678,177	-				-1.3
2,678,281	+		IAI47_12725	0.15	+0.2
2,678,281	+		IAI47_12725	0.15	+0.8
2,678,282	-		IAI47_12725	0.15	-0.8
2,678,282	-		IAI47_12725	0.15	-0.8
2,678,312	+		IAI47_12725	0.18	-0.5
2,678,312	+		IAI47_12725	0.18	+0.3
2,678,312	+		IAI47_12725	0.18	-1.4
2,678,312	+		IAI47_12725	0.18	-1.3
2,678,313	-		IAI47_12725	0.19	-1.4
2,678,369	+		IAI47_12725	0.24	+1.9
2,678,369	+		IAI47_12725	0.24	+0.7
2,678,369	+		IAI47_12725	0.24	+0.2
2,678,370	-		IAI47_12725	0.25	-1.7
2,678,370	-		IAI47_12725	0.25	+0.2
2,678,370	-		IAI47_12725	0.25	+0.2
2,678,370	-		IAI47_12725	0.25	-1.7
2,678,436	+		IAI47_12725	0.31	-0.9
2,678,437	-		IAI47_12725	0.32	-0.2
2,678,566	+		IAI47_12725	0.45	+1.9
2,678,566	+		IAI47_12725	0.45	-1.6
2,678,567	-		IAI47_12725	0.45	+1.1
2,678,567	-		IAI47_12725	0.45	-0.6
2,678,581	+		IAI47_12725	0.47	+0.0
2,678,582	-		IAI47_12725	0.47	+0.7
2,678,582	-		IAI47_12725	0.47	-1.2
2,678,604	-		IAI47_12725	0.49	-0.7
2,678,609	+		IAI47_12725	0.50	-2.0
2,678,609	+		IAI47_12725	0.50	-0.8
2,678,610	-		IAI47_12725	0.50	+0.3
2,678,610	-		IAI47_12725	0.50	+0.3
2,678,612	+		IAI47_12725	0.50	+0.3
2,678,613	-		IAI47_12725	0.50	+0.2
2,678,613	-		IAI47_12725	0.50	-0.3
2,678,613	-		IAI47_12725	0.50	+0.8
2,678,613	-		IAI47_12725	0.50	-0.9
2,678,613	-		IAI47_12725	0.50	+1.8
2,678,613	-		IAI47_12725	0.50	-0.3
2,678,613	-		IAI47_12725	0.50	-1.3
2,678,622	+		IAI47_12725	0.51	-2.4
2,678,622	+		IAI47_12725	0.51	+1.1
2,678,623	-		IAI47_12725	0.51	-0.5
2,678,694	+		IAI47_12725	0.58	+0.0
2,678,694	+		IAI47_12725	0.58	+0.6
2,678,695	-		IAI47_12725	0.59	-0.4
2,678,695	-		IAI47_12725	0.59	+0.3
2,678,695	-		IAI47_12725	0.59	-1.0
2,678,697	+		IAI47_12725	0.59	-1.6
2,678,697	+		IAI47_12725	0.59	+1.2
2,678,697	+		IAI47_12725	0.59	+0.9
2,678,698	-		IAI47_12725	0.59	+1.5
2,678,753	+		IAI47_12725	0.65	+0.8
2,678,753	+		IAI47_12725	0.65	-0.2
2,678,753	+		IAI47_12725	0.65	+1.6
2,678,753	+		IAI47_12725	0.65	-0.7
2,678,772	+		IAI47_12725	0.67	+0.0
2,678,772	+		IAI47_12725	0.67	+0.6
2,678,772	+		IAI47_12725	0.67	+2.0
2,678,772	+		IAI47_12725	0.67	+1.0
2,678,773	-		IAI47_12725	0.67	+0.4
2,678,773	-		IAI47_12725	0.67	-1.5
2,678,790	+		IAI47_12725	0.69	-1.9
2,678,790	+		IAI47_12725	0.69	-0.2
2,678,791	-		IAI47_12725	0.69	+0.4
2,678,814	-		IAI47_12725	0.71	-0.5
2,678,832	-		IAI47_12725	0.73	-0.3
2,678,837	+		IAI47_12725	0.73	-0.2
2,678,931	+		IAI47_12725	0.83	-0.4
2,678,932	-		IAI47_12725	0.83	+0.4
2,678,932	-		IAI47_12725	0.83	+1.4
2,679,015	+				-0.6
2,679,015	+				+0.5
2,679,016	-				+1.6
2,679,016	-				+0.8
2,679,016	-				+1.2
2,679,016	-				+0.9
2,679,016	-				-0.6
2,679,075	-				+2.5
2,679,087	+				-0.6
2,679,088	-				-0.8
2,679,100	+				-0.2
2,679,100	+				+1.5
2,679,100	+				+1.0
2,679,101	-				+1.4
2,679,101	-				+1.1
2,679,101	-				-1.6
2,679,150	+				+0.1
2,679,150	+				-0.1
2,679,158	+				+0.1
2,679,192	+				+3.3
2,679,192	+				-0.7
2,679,241	+		IAI47_12730	0.12	+0.5
2,679,242	-		IAI47_12730	0.12	-2.2
2,679,242	-		IAI47_12730	0.12	+0.1
2,679,244	+		IAI47_12730	0.12	-1.6
2,679,245	-		IAI47_12730	0.12	+2.3
2,679,245	-		IAI47_12730	0.12	-1.0
2,679,487	-		IAI47_12730	0.34	+1.8
2,679,549	+		IAI47_12730	0.39	-0.9
2,679,550	-		IAI47_12730	0.39	+0.5
2,679,550	-		IAI47_12730	0.39	+1.7
2,679,593	+		IAI47_12730	0.43	-1.0
2,679,594	-		IAI47_12730	0.43	-0.0
2,679,681	+		IAI47_12730	0.50	+0.2
2,679,682	-		IAI47_12730	0.50	+0.4
2,679,682	-		IAI47_12730	0.50	+1.8
2,679,682	-		IAI47_12730	0.50	-2.3
2,679,766	+		IAI47_12730	0.58	+1.1
2,679,766	+		IAI47_12730	0.58	+0.9
2,679,767	-		IAI47_12730	0.58	+0.4
2,680,047	-		IAI47_12730	0.82	-0.7
2,680,056	+		IAI47_12730	0.83	-0.2
2,680,056	+		IAI47_12730	0.83	+0.6
2,680,056	+		IAI47_12730	0.83	+0.9
2,680,057	-		IAI47_12730	0.83	-0.5
2,680,057	-		IAI47_12730	0.83	+1.5
2,680,057	-		IAI47_12730	0.83	+3.2
2,680,082	+		IAI47_12730	0.85	-0.0
2,680,083	-		IAI47_12730	0.85	-0.2
2,680,083	-		IAI47_12730	0.85	+0.5
2,680,221	-				+0.1
2,680,290	+				+1.3
2,680,290	+				+0.2
2,680,290	+				+0.8
2,680,290	+				+0.6
2,680,291	-				+0.9
2,680,291	-				+0.8
2,680,291	-				+0.6
2,680,291	-				-0.7
2,680,291	-				-0.7
2,680,298	+				+0.0
2,680,298	+				+0.1
2,680,299	-				-0.0
2,680,299	-				+0.6
2,680,340	+				-0.5
2,680,341	-		IAI47_12735	0.10	-1.4
2,680,514	+		IAI47_12735	0.32	-1.4
2,680,555	-		IAI47_12735	0.37	-1.2
2,680,575	+		IAI47_12735	0.40	-1.5
2,680,575	+		IAI47_12735	0.40	-2.1
2,680,576	-		IAI47_12735	0.40	-0.4
2,680,576	-		IAI47_12735	0.40	+0.3
2,680,576	-		IAI47_12735	0.40	-0.9
2,680,576	-		IAI47_12735	0.40	-0.6
2,680,576	-		IAI47_12735	0.40	-0.4
2,680,679	-		IAI47_12735	0.53	-0.9
2,680,679	-		IAI47_12735	0.53	-2.4
2,680,679	-		IAI47_12735	0.53	-2.0
2,680,686	+		IAI47_12735	0.54	-0.0
2,680,686	+		IAI47_12735	0.54	-0.3
2,680,686	+		IAI47_12735	0.54	-0.7
2,680,686	+		IAI47_12735	0.54	+2.2
2,680,686	+		IAI47_12735	0.54	+1.2
2,680,686	+		IAI47_12735	0.54	+0.0
2,680,686	+		IAI47_12735	0.54	-1.4
2,680,687	-		IAI47_12735	0.54	+0.0
2,680,687	-		IAI47_12735	0.54	-1.1
2,680,687	-		IAI47_12735	0.54	+0.9
2,680,687	-		IAI47_12735	0.54	+0.3
2,680,687	-		IAI47_12735	0.54	-1.8
2,680,687	-		IAI47_12735	0.54	-0.2
2,680,687	-		IAI47_12735	0.54	+1.8
2,680,687	-		IAI47_12735	0.54	+0.1
2,680,687	-		IAI47_12735	0.54	-2.4
2,680,690	+		IAI47_12735	0.54	-1.2
2,680,690	+		IAI47_12735	0.54	-0.2
2,680,691	-		IAI47_12735	0.54	-1.0
2,680,691	-		IAI47_12735	0.54	+0.6
2,680,691	-		IAI47_12735	0.54	+0.2
2,680,692	-		IAI47_12735	0.54	-1.0
2,680,741	+		IAI47_12735	0.61	+2.0
2,680,741	+		IAI47_12735	0.61	+1.1
2,680,741	+		IAI47_12735	0.61	+0.1
2,680,742	-		IAI47_12735	0.61	+1.8
2,680,742	-		IAI47_12735	0.61	-1.0
2,680,742	-		IAI47_12735	0.61	-0.5
2,680,742	-		IAI47_12735	0.61	-0.2
2,680,742	-		IAI47_12735	0.61	-1.0
2,680,742	-		IAI47_12735	0.61	-0.4
2,680,742	-		IAI47_12735	0.61	+0.2
2,680,767	+		IAI47_12735	0.64	+1.8
2,680,768	-		IAI47_12735	0.64	+0.7
2,680,768	-		IAI47_12735	0.64	-1.9
2,680,800	+		IAI47_12735	0.68	-0.6
2,680,800	+		IAI47_12735	0.68	+1.0
2,680,801	-		IAI47_12735	0.68	+0.0
2,680,801	-		IAI47_12735	0.68	+1.1
2,680,863	+		IAI47_12735	0.76	+0.9
2,680,864	-		IAI47_12735	0.76	-1.0
2,680,864	-		IAI47_12735	0.76	+0.1
2,680,944	+		IAI47_12735	0.86	+3.3
2,680,944	+		IAI47_12735	0.86	-0.4
2,680,944	+		IAI47_12735	0.86	-0.4
2,680,945	-		IAI47_12735	0.86	+1.8
2,680,952	-		IAI47_12735	0.87	-1.4
2,680,992	-				+2.0
2,681,121	+				-1.5
2,681,121	+				+0.0
2,681,122	-				-0.5
2,681,122	-				-1.3
2,681,122	-				+0.7
2,681,137	+		IAI47_12740	0.11	-0.3
2,681,137	+		IAI47_12740	0.11	+0.3
2,681,137	+		IAI47_12740	0.11	+0.9
2,681,138	-		IAI47_12740	0.11	+0.9
2,681,138	-		IAI47_12740	0.11	+0.3
2,681,144	+		IAI47_12740	0.12	-1.1
2,681,144	+		IAI47_12740	0.12	+0.4
2,681,159	+		IAI47_12740	0.14	-0.2
2,681,159	+		IAI47_12740	0.14	-0.5
2,681,160	-		IAI47_12740	0.14	-0.4