Strain Fitness in Pantoea sp. MT58 around IAI47_11225

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,372,372	+		IAI47_11215	0.83	-0.8
2,372,420	-		IAI47_11215	0.88	-1.9
2,372,420	-		IAI47_11215	0.88	-1.6
2,372,430	+		IAI47_11215	0.89	-0.1
2,372,430	+		IAI47_11215	0.89	+0.8
2,372,430	+		IAI47_11215	0.89	-0.2
2,372,430	+		IAI47_11215	0.89	+0.2
2,372,430	+		IAI47_11215	0.89	+0.7
2,372,430	+		IAI47_11215	0.89	-1.9
2,372,430	+		IAI47_11215	0.89	+0.1
2,372,430	+		IAI47_11215	0.89	+1.9
2,372,430	+		IAI47_11215	0.89	-1.7
2,372,431	-		IAI47_11215	0.89	-0.1
2,372,431	-		IAI47_11215	0.89	+0.0
2,372,431	-		IAI47_11215	0.89	-0.1
2,372,431	-		IAI47_11215	0.89	-1.1
2,372,431	-		IAI47_11215	0.89	-2.0
2,372,434	+		IAI47_11215	0.89	-1.0
2,372,434	+		IAI47_11215	0.89	-0.2
2,372,435	-		IAI47_11215	0.89	-0.1
2,372,435	-		IAI47_11215	0.89	+1.3
2,372,503	+				-1.1
2,372,503	+				+0.6
2,372,504	-				-0.4
2,372,504	-				-0.9
2,372,504	-				-0.6
2,372,504	-				-0.9
2,372,524	+				+1.2
2,372,524	+				-1.0
2,372,524	+				+0.6
2,372,525	-				-2.4
2,372,593	+				-1.8
2,372,593	+				-3.0
2,372,639	+		IAI47_11220	0.11	-0.6
2,372,639	+		IAI47_11220	0.11	-1.3
2,372,639	+		IAI47_11220	0.11	-2.4
2,372,639	+		IAI47_11220	0.11	+0.4
2,372,639	+		IAI47_11220	0.11	-0.5
2,372,640	-		IAI47_11220	0.11	+1.4
2,372,732	-		IAI47_11220	0.23	+0.7
2,372,732	-		IAI47_11220	0.23	+1.0
2,372,732	-		IAI47_11220	0.23	+1.3
2,372,826	+		IAI47_11220	0.35	-1.5
2,372,827	-		IAI47_11220	0.35	-2.2
2,372,827	-		IAI47_11220	0.35	+1.3
2,372,840	+		IAI47_11220	0.37	-1.7
2,372,840	+		IAI47_11220	0.37	-1.2
2,372,840	+		IAI47_11220	0.37	-2.3
2,372,841	-		IAI47_11220	0.37	-1.1
2,372,841	-		IAI47_11220	0.37	+1.6
2,372,861	+		IAI47_11220	0.39	-1.3
2,372,874	-		IAI47_11220	0.41	-1.5
2,372,916	+		IAI47_11220	0.46	+0.0
2,372,947	+		IAI47_11220	0.50	-0.1
2,372,947	+		IAI47_11220	0.50	-0.1
2,372,948	-		IAI47_11220	0.50	+1.0
2,373,008	+		IAI47_11220	0.58	+0.7
2,373,015	-		IAI47_11220	0.59	+0.9
2,373,019	+		IAI47_11220	0.60	-0.2
2,373,020	-		IAI47_11220	0.60	+1.0
2,373,024	+		IAI47_11220	0.60	-1.3
2,373,024	+		IAI47_11220	0.60	-1.6
2,373,026	+		IAI47_11220	0.60	+0.0
2,373,026	+		IAI47_11220	0.60	-0.5
2,373,027	-		IAI47_11220	0.61	-0.9
2,373,056	-		IAI47_11220	0.64	-1.4
2,373,233	+		IAI47_11220	0.87	-0.8
2,373,233	+		IAI47_11220	0.87	-1.1
2,373,288	+				-1.6
2,373,288	+				+0.5
2,373,289	-				+0.8
2,373,346	+				+0.5
2,373,347	-				+0.6
2,373,353	+				+1.0
2,373,391	+				+0.6
2,373,392	-				+0.5
2,373,422	+				+0.4
2,373,422	+				-0.0
2,373,422	+				-0.7
2,373,423	-				-0.0
2,373,423	-				-0.7
2,373,423	-				-0.1
2,373,423	-				-1.8
2,373,449	+		IAI47_11225	0.11	+1.2
2,373,449	+		IAI47_11225	0.11	+0.5
2,373,449	+		IAI47_11225	0.11	-0.9
2,373,449	+		IAI47_11225	0.11	+1.3
2,373,449	+		IAI47_11225	0.11	-1.6
2,373,449	+		IAI47_11225	0.11	-1.3
2,373,450	-		IAI47_11225	0.11	-0.3
2,373,450	-		IAI47_11225	0.11	-0.8
2,373,457	+		IAI47_11225	0.12	+1.1
2,373,490	+		IAI47_11225	0.15	+2.1
2,373,490	+		IAI47_11225	0.15	-0.1
2,373,490	+		IAI47_11225	0.15	-0.6
2,373,491	-		IAI47_11225	0.15	-1.6
2,373,491	-		IAI47_11225	0.15	-0.8
2,373,491	-		IAI47_11225	0.15	+0.2
2,373,523	+		IAI47_11225	0.18	+0.2
2,373,524	-		IAI47_11225	0.19	-0.1
2,373,685	+		IAI47_11225	0.35	-1.4
2,373,686	-		IAI47_11225	0.36	-0.5
2,373,686	-		IAI47_11225	0.36	-0.0
2,373,686	-		IAI47_11225	0.36	-0.9
2,373,686	-		IAI47_11225	0.36	-1.3
2,373,760	+		IAI47_11225	0.43	-1.3
2,373,760	+		IAI47_11225	0.43	+0.5
2,373,761	-		IAI47_11225	0.43	-0.8
2,373,761	-		IAI47_11225	0.43	+0.2
2,373,841	+		IAI47_11225	0.52	+1.0
2,373,841	+		IAI47_11225	0.52	+0.1
2,373,842	-		IAI47_11225	0.52	+0.2
2,373,842	-		IAI47_11225	0.52	-2.1
2,373,843	+		IAI47_11225	0.52	-0.2
2,373,844	-		IAI47_11225	0.52	-0.6
2,373,950	+		IAI47_11225	0.63	-0.7
2,373,950	+		IAI47_11225	0.63	-1.2
2,373,950	+		IAI47_11225	0.63	-1.9
2,373,950	+		IAI47_11225	0.63	-0.8
2,373,950	+		IAI47_11225	0.63	-0.0
2,373,950	+		IAI47_11225	0.63	+0.1
2,373,950	+		IAI47_11225	0.63	-0.7
2,373,950	+		IAI47_11225	0.63	+1.0
2,373,950	+		IAI47_11225	0.63	+0.0
2,373,951	-		IAI47_11225	0.63	-1.9
2,373,951	-		IAI47_11225	0.63	+0.1
2,373,951	-		IAI47_11225	0.63	+1.7
2,373,951	-		IAI47_11225	0.63	+0.7
2,374,015	+		IAI47_11225	0.70	-0.4
2,374,015	+		IAI47_11225	0.70	+1.5
2,374,015	+		IAI47_11225	0.70	+0.5
2,374,015	+		IAI47_11225	0.70	-1.1
2,374,015	+		IAI47_11225	0.70	+1.8
2,374,015	+		IAI47_11225	0.70	-2.3
2,374,015	+		IAI47_11225	0.70	-1.5
2,374,016	-		IAI47_11225	0.70	+1.0
2,374,054	+		IAI47_11225	0.74	-0.5
2,374,055	-		IAI47_11225	0.74	+1.7
2,374,055	-		IAI47_11225	0.74	-1.3
2,374,120	+		IAI47_11225	0.81	+1.7
2,374,121	-		IAI47_11225	0.81	-0.0
2,374,130	-		IAI47_11225	0.82	-0.2
2,374,178	-		IAI47_11225	0.87	+1.4
2,374,202	+		IAI47_11225	0.90	+0.8
2,374,202	+		IAI47_11225	0.90	-0.5
2,374,202	+		IAI47_11225	0.90	-0.3
2,374,203	-		IAI47_11225	0.90	+2.3
2,374,233	+				-0.1
2,374,233	+				+0.5
2,374,233	+				-3.3
2,374,233	+				+0.6
2,374,233	+				-0.7
2,374,233	+				-0.3
2,374,234	-				-1.3
2,374,234	-				-1.5
2,374,234	-				-0.2
2,374,237	+				-0.7
2,374,237	+				-1.5
2,374,238	-				+1.1
2,374,238	-				+0.6
2,374,288	+				-1.7
2,374,298	+				-0.7
2,374,299	-				-0.4
2,374,299	-				+1.6
2,374,330	+				-0.4
2,374,331	-				-0.1
2,374,344	+				-0.8
2,374,344	+				+0.2
2,374,344	+				+0.2
2,374,344	+				-0.0
2,374,345	-				+1.2
2,374,345	-				+0.8
2,374,345	-				+0.2
2,374,359	+				-1.3
2,374,359	+				+0.3
2,374,359	+				-0.8
2,374,360	-				+0.2
2,374,360	-				+1.3
2,374,362	+				+0.6
2,374,362	+				-0.5
2,374,363	-				-1.9
2,374,404	+				-0.4
2,374,405	-				-0.2
2,374,456	+				+1.5
2,374,456	+				-0.2
2,374,494	+		IAI47_11230	0.10	-2.1
2,374,495	-		IAI47_11230	0.10	-0.0
2,374,496	+		IAI47_11230	0.11	-0.4
2,374,504	+		IAI47_11230	0.11	-1.1
2,374,504	+		IAI47_11230	0.11	+2.4
2,374,504	+		IAI47_11230	0.11	-0.7
2,374,504	+		IAI47_11230	0.11	-0.5
2,374,505	-		IAI47_11230	0.11	+2.1
2,374,505	-		IAI47_11230	0.11	-0.9
2,374,505	-		IAI47_11230	0.11	-0.2
2,374,505	-		IAI47_11230	0.11	+0.1
2,374,505	-		IAI47_11230	0.11	-0.0
2,374,506	+		IAI47_11230	0.11	-0.5
2,374,506	+		IAI47_11230	0.11	+1.8
2,374,506	+		IAI47_11230	0.11	-0.0
2,374,506	+		IAI47_11230	0.11	-2.0
2,374,506	+		IAI47_11230	0.11	+0.8
2,374,507	-		IAI47_11230	0.11	+0.6
2,374,507	-		IAI47_11230	0.11	+1.2
2,374,507	-		IAI47_11230	0.11	+1.2
2,374,507	-		IAI47_11230	0.11	-0.2
2,374,602	+		IAI47_11230	0.18	+0.1
2,374,602	+		IAI47_11230	0.18	-0.1
2,374,632	+		IAI47_11230	0.20	-0.2
2,374,632	+		IAI47_11230	0.20	-0.1
2,374,632	+		IAI47_11230	0.20	+0.1
2,374,633	-		IAI47_11230	0.20	+0.7
2,374,687	+		IAI47_11230	0.24	+1.0
2,374,687	+		IAI47_11230	0.24	-0.0
2,374,687	+		IAI47_11230	0.24	-1.3
2,374,687	+		IAI47_11230	0.24	-1.3
2,374,687	+		IAI47_11230	0.24	-2.3
2,374,688	-		IAI47_11230	0.24	+0.5
2,374,688	-		IAI47_11230	0.24	+1.3
2,374,688	-		IAI47_11230	0.24	+1.1
2,374,688	-		IAI47_11230	0.24	+1.8
2,374,688	-		IAI47_11230	0.24	+0.1
2,374,688	-		IAI47_11230	0.24	+1.2
2,374,688	-		IAI47_11230	0.24	-2.2
2,374,689	+		IAI47_11230	0.24	+0.3
2,374,689	+		IAI47_11230	0.24	-0.4
2,374,689	+		IAI47_11230	0.24	-0.5
2,374,689	+		IAI47_11230	0.24	+0.2
2,374,689	+		IAI47_11230	0.24	+0.4
2,374,689	+		IAI47_11230	0.24	+0.0
2,374,690	-		IAI47_11230	0.24	+0.2
2,374,702	+		IAI47_11230	0.25	-1.8
2,374,702	+		IAI47_11230	0.25	-1.7
2,374,702	+		IAI47_11230	0.25	+1.6
2,374,703	-		IAI47_11230	0.25	-1.3
2,374,705	+		IAI47_11230	0.25	+0.7
2,374,705	+		IAI47_11230	0.25	-0.0
2,374,706	-		IAI47_11230	0.25	+1.4
2,374,706	-		IAI47_11230	0.25	-0.9
2,374,706	-		IAI47_11230	0.25	-1.2
2,374,706	-		IAI47_11230	0.25	+2.2
2,374,737	+		IAI47_11230	0.27	-0.2
2,374,800	+		IAI47_11230	0.32	-0.8
2,374,825	+		IAI47_11230	0.34	+0.5
2,374,909	-		IAI47_11230	0.39	-1.5
2,374,909	-		IAI47_11230	0.39	+0.8
2,374,950	+		IAI47_11230	0.42	+0.3
2,374,950	+		IAI47_11230	0.42	+3.7
2,374,950	+		IAI47_11230	0.42	-0.9
2,374,950	+		IAI47_11230	0.42	-0.7
2,374,950	+		IAI47_11230	0.42	+0.1
2,374,951	-		IAI47_11230	0.42	-1.1
2,374,951	-		IAI47_11230	0.42	+1.0
2,374,979	-		IAI47_11230	0.44	+1.9
2,374,979	-		IAI47_11230	0.44	-0.3
2,375,019	+		IAI47_11230	0.47	+0.6
2,375,020	-		IAI47_11230	0.47	-0.7
2,375,020	-		IAI47_11230	0.47	+0.6
2,375,020	-		IAI47_11230	0.47	+0.2
2,375,023	+		IAI47_11230	0.47	-1.1
2,375,023	+		IAI47_11230	0.47	+0.5
2,375,023	+		IAI47_11230	0.47	-1.5
2,375,023	+		IAI47_11230	0.47	+0.8
2,375,023	+		IAI47_11230	0.47	-0.6
2,375,023	+		IAI47_11230	0.47	-0.5
2,375,023	+		IAI47_11230	0.47	+0.5
2,375,023	+		IAI47_11230	0.47	+1.6
2,375,024	-		IAI47_11230	0.47	-0.9
2,375,024	-		IAI47_11230	0.47	+0.2
2,375,024	-		IAI47_11230	0.47	-0.2
2,375,024	-		IAI47_11230	0.47	+2.2
2,375,046	+		IAI47_11230	0.49	+0.2
2,375,047	-		IAI47_11230	0.49	+0.5
2,375,100	+		IAI47_11230	0.53	+0.5
2,375,100	+		IAI47_11230	0.53	+2.3
2,375,100	+		IAI47_11230	0.53	+1.6
2,375,101	-		IAI47_11230	0.53	+0.6
2,375,104	+		IAI47_11230	0.53	+0.5
2,375,104	+		IAI47_11230	0.53	+0.9
2,375,137	+		IAI47_11230	0.55	+0.7
2,375,138	-		IAI47_11230	0.55	-0.8