Strain Fitness in Pantoea sp. MT58 around IAI47_08715

Experiment: Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,843,261	+		IAI47_08710	0.27	-0.6
1,843,261	+		IAI47_08710	0.27	+0.3
1,843,261	+		IAI47_08710	0.27	-1.6
1,843,261	+		IAI47_08710	0.27	-2.3
1,843,261	+		IAI47_08710	0.27	-1.2
1,843,261	+		IAI47_08710	0.27	-2.1
1,843,261	+		IAI47_08710	0.27	-0.2
1,843,261	+		IAI47_08710	0.27	-0.9
1,843,262	-		IAI47_08710	0.27	+0.6
1,843,262	-		IAI47_08710	0.27	+1.2
1,843,264	+		IAI47_08710	0.27	+3.3
1,843,264	+		IAI47_08710	0.27	-0.8
1,843,264	+		IAI47_08710	0.27	-0.1
1,843,265	-		IAI47_08710	0.28	+0.5
1,843,265	-		IAI47_08710	0.28	+0.4
1,843,265	-		IAI47_08710	0.28	-1.4
1,843,265	-		IAI47_08710	0.28	-0.2
1,843,265	-		IAI47_08710	0.28	-1.5
1,843,265	-		IAI47_08710	0.28	+1.0
1,843,265	-		IAI47_08710	0.28	-0.3
1,843,265	-		IAI47_08710	0.28	+1.8
1,843,265	-		IAI47_08710	0.28	-2.2
1,843,265	-		IAI47_08710	0.28	-1.8
1,843,265	-		IAI47_08710	0.28	-1.7
1,843,316	+		IAI47_08710	0.33	-1.5
1,843,317	-		IAI47_08710	0.33	+2.2
1,843,317	-		IAI47_08710	0.33	-1.2
1,843,317	-		IAI47_08710	0.33	+1.0
1,843,317	-		IAI47_08710	0.33	-0.9
1,843,360	+		IAI47_08710	0.38	-1.3
1,843,361	-		IAI47_08710	0.38	-0.2
1,843,552	+		IAI47_08710	0.60	-1.4
1,843,552	+		IAI47_08710	0.60	+0.3
1,843,553	-		IAI47_08710	0.60	+1.6
1,843,604	+		IAI47_08710	0.66	-0.6
1,843,604	+		IAI47_08710	0.66	-0.5
1,843,642	+		IAI47_08710	0.70	-1.5
1,843,643	-		IAI47_08710	0.70	-0.5
1,843,643	-		IAI47_08710	0.70	+0.9
1,843,660	+		IAI47_08710	0.72	-0.4
1,843,660	+		IAI47_08710	0.72	-0.3
1,843,660	+		IAI47_08710	0.72	-0.3
1,843,661	-		IAI47_08710	0.72	-0.8
1,843,661	-		IAI47_08710	0.72	-1.1
1,843,661	-		IAI47_08710	0.72	-0.3
1,843,661	-		IAI47_08710	0.72	-1.3
1,843,766	+		IAI47_08710	0.84	-1.4
1,843,766	+		IAI47_08710	0.84	+0.6
1,843,767	-		IAI47_08710	0.84	-0.6
1,843,767	-		IAI47_08710	0.84	-0.5
1,843,767	-		IAI47_08710	0.84	+0.0
1,843,840	+				+0.7
1,843,840	+				-1.0
1,843,840	+				+0.5
1,843,841	-				+1.6
1,843,858	-				+0.7
1,843,861	+				-2.1
1,843,861	+				-2.1
1,843,861	+				+1.6
1,843,862	-				-0.9
1,843,862	-				-0.7
1,843,867	+				-0.2
1,843,867	+				+1.0
1,843,868	-				-0.4
1,843,868	-				-0.7
1,843,892	+				+1.0
1,843,893	-				+0.0
1,843,902	-				-0.5
1,843,907	+				+1.9
1,843,908	-				-0.4
1,843,908	-				-1.0
1,843,908	-				+2.6
1,843,920	+				+1.3
1,843,920	+				+2.0
1,843,920	+				-0.3
1,843,921	-				-1.9
1,843,921	-				-0.1
1,843,921	-				+0.5
1,843,921	-				+1.9
1,843,951	+				+1.6
1,843,951	+				+1.1
1,843,984	+				+0.4
1,843,984	+				-0.2
1,843,985	-				+1.3
1,843,985	-				-1.1
1,843,985	-				-1.0
1,843,985	-				+1.6
1,843,985	-				+2.2
1,843,985	-				+0.8
1,843,989	+				+0.4
1,843,989	+				-1.4
1,843,990	-				-0.9
1,843,990	-				-0.3
1,843,990	-				+0.9
1,843,990	-				+0.5
1,843,990	-				+1.5
1,843,998	+				-0.8
1,843,999	-				+0.4
1,843,999	-				+0.6
1,844,003	+				+0.7
1,844,003	+				+0.1
1,844,004	-				+0.8
1,844,004	-				+0.7
1,844,004	-				+1.0
1,844,004	-				-1.7
1,844,004	-				-0.1
1,844,038	+				+1.7
1,844,079	-				-0.3
1,844,079	-				-0.7
1,844,079	-				-0.9
1,844,132	+				+0.4
1,844,132	+				-0.2
1,844,133	-				+0.8
1,844,231	+				+0.5
1,844,231	+				+0.1
1,844,232	-				+0.6
1,844,232	-				+0.3
1,844,232	-				+0.3
1,844,363	+				+0.6
1,844,364	-				-0.1
1,844,393	+		IAI47_08715	0.10	-1.7
1,844,394	-		IAI47_08715	0.10	-2.1
1,844,394	-		IAI47_08715	0.10	-0.4
1,844,394	-		IAI47_08715	0.10	-0.2
1,844,450	+		IAI47_08715	0.14	-0.6
1,844,451	-		IAI47_08715	0.14	-1.1
1,844,483	+		IAI47_08715	0.17	+0.3
1,844,483	+		IAI47_08715	0.17	+1.6
1,844,484	-		IAI47_08715	0.17	+1.7
1,844,484	-		IAI47_08715	0.17	+0.7
1,844,534	+		IAI47_08715	0.20	+0.3
1,844,534	+		IAI47_08715	0.20	+1.1
1,844,534	+		IAI47_08715	0.20	+1.5
1,844,534	+		IAI47_08715	0.20	-0.4
1,844,534	+		IAI47_08715	0.20	-0.1
1,844,535	-		IAI47_08715	0.20	+0.6
1,844,535	-		IAI47_08715	0.20	-1.5
1,844,535	-		IAI47_08715	0.20	-1.2
1,844,535	-		IAI47_08715	0.20	-1.9
1,844,535	-		IAI47_08715	0.20	-1.0
1,844,537	+		IAI47_08715	0.20	+0.9
1,844,537	+		IAI47_08715	0.20	+2.4
1,844,700	+		IAI47_08715	0.32	-0.1
1,844,701	-		IAI47_08715	0.32	-0.9
1,844,701	-		IAI47_08715	0.32	+0.6
1,844,826	-		IAI47_08715	0.42	+0.0
1,844,865	+		IAI47_08715	0.44	-0.8
1,844,865	+		IAI47_08715	0.44	+1.1
1,844,865	+		IAI47_08715	0.44	-1.5
1,844,866	-		IAI47_08715	0.44	+0.9
1,844,866	-		IAI47_08715	0.44	+0.3
1,844,866	-		IAI47_08715	0.44	-0.2
1,844,879	+		IAI47_08715	0.45	+0.8
1,845,080	+		IAI47_08715	0.60	+0.6
1,845,080	+		IAI47_08715	0.60	+0.0
1,845,080	+		IAI47_08715	0.60	+0.3
1,845,080	+		IAI47_08715	0.60	-1.0
1,845,080	+		IAI47_08715	0.60	+0.8
1,845,081	-		IAI47_08715	0.60	+1.6
1,845,099	-		IAI47_08715	0.61	-2.1
1,845,099	-		IAI47_08715	0.61	+0.3
1,845,148	-		IAI47_08715	0.65	+0.8
1,845,191	+		IAI47_08715	0.68	+1.8
1,845,226	+		IAI47_08715	0.71	+0.6
1,845,227	-		IAI47_08715	0.71	+0.1
1,845,230	+		IAI47_08715	0.71	+0.6
1,845,230	+		IAI47_08715	0.71	+0.4
1,845,230	+		IAI47_08715	0.71	-2.2
1,845,230	+		IAI47_08715	0.71	-0.7
1,845,230	+		IAI47_08715	0.71	+0.3
1,845,231	-		IAI47_08715	0.71	+0.0
1,845,231	-		IAI47_08715	0.71	+1.5
1,845,231	-		IAI47_08715	0.71	-2.4
1,845,231	-		IAI47_08715	0.71	-0.9
1,845,231	-		IAI47_08715	0.71	+1.3
1,845,231	-		IAI47_08715	0.71	+0.0
1,845,231	-		IAI47_08715	0.71	+0.3
1,845,237	+		IAI47_08715	0.72	-0.9
1,845,276	+		IAI47_08715	0.74	-0.7
1,845,276	+		IAI47_08715	0.74	-1.5
1,845,277	-		IAI47_08715	0.74	-1.7
1,845,277	-		IAI47_08715	0.74	-1.1
1,845,277	-		IAI47_08715	0.74	+0.3
1,845,350	+		IAI47_08715	0.80	-0.0
1,845,350	+		IAI47_08715	0.80	+1.3
1,845,350	+		IAI47_08715	0.80	+2.2
1,845,351	-		IAI47_08715	0.80	+1.2
1,845,373	+		IAI47_08715	0.81	+2.6
1,845,373	+		IAI47_08715	0.81	-0.3
1,845,373	+		IAI47_08715	0.81	-0.9
1,845,374	-		IAI47_08715	0.82	+1.1
1,845,395	+		IAI47_08715	0.83	+1.0
1,845,395	+		IAI47_08715	0.83	-0.4
1,845,396	-		IAI47_08715	0.83	+0.4
1,845,572	+				+0.7
1,845,572	+				-1.2
1,845,573	-				+0.5
1,845,573	-				+1.4
1,845,573	-				+1.5
1,845,578	+				+0.6
1,845,578	+				+1.4
1,845,578	+				+0.1
1,845,579	-				-1.3
1,845,579	-				-0.3
1,845,579	-				+0.1
1,845,579	-				-2.2
1,845,579	-				+0.2
1,845,579	-				+1.3
1,845,579	-				-0.1
1,845,579	-				-0.2
1,845,580	+				+0.3
1,845,580	+				+0.6
1,845,581	-				-1.1
1,845,581	-				-1.3
1,845,581	-				+0.5
1,845,581	-				+0.5
1,845,581	-				+0.9
1,845,581	-				+0.0
1,845,597	+				+1.9
1,845,597	+				-0.7
1,845,598	-				-0.4
1,845,626	+				-0.3
1,845,626	+				+0.3
1,845,626	+				+0.3
1,845,626	+				+0.2
1,845,626	+				-1.4
1,845,626	+				+0.3
1,845,626	+				-1.1
1,845,626	+				-0.5
1,845,627	-				+0.4
1,845,627	-				+1.8
1,845,627	-				-0.2
1,845,631	+				+1.4
1,845,632	-				+0.3
1,845,632	-				-0.2
1,845,635	+				+0.3
1,845,638	+				-1.3
1,845,639	-				-0.6
1,845,651	+				+0.7
1,845,662	+				-1.3
1,845,663	-				-0.4
1,845,663	-				+0.9
1,845,712	+				+1.0
1,845,717	+				+1.9
1,845,731	+				-0.8
1,845,732	-				+1.3
1,845,762	+				+0.9
1,845,762	+				-0.6
1,845,762	+				+0.8
1,845,762	+				-0.9
1,845,762	+				-0.2
1,845,763	-				-1.0
1,845,763	-				+1.0
1,845,763	-				-1.7
1,845,763	-				+0.2
1,845,764	+				+0.5
1,845,764	+				+2.1
1,845,764	+				+1.6
1,845,765	-				-1.3
1,845,800	+				+1.3
1,845,801	-				-1.1
1,845,803	+				+0.1
1,845,803	+				-1.2
1,845,804	-				+0.0
1,845,804	-				+0.1
1,845,834	+				+1.4
1,845,864	+				+0.6
1,845,865	-				-0.4
1,845,865	-				+1.0
1,845,912	+		IAI47_08720	0.12	+1.6
1,845,912	+		IAI47_08720	0.12	+1.0
1,845,912	+		IAI47_08720	0.12	+2.6
1,845,912	+		IAI47_08720	0.12	-0.6
1,845,912	+		IAI47_08720	0.12	+1.1
1,845,912	+		IAI47_08720	0.12	-0.3
1,845,912	+		IAI47_08720	0.12	-0.9
1,845,913	-		IAI47_08720	0.12	-0.4
1,845,913	-		IAI47_08720	0.12	-1.8
1,845,913	-		IAI47_08720	0.12	+1.2
1,845,916	-		IAI47_08720	0.13	+0.3
1,845,916	-		IAI47_08720	0.13	-0.1
1,845,958	+		IAI47_08720	0.18	-1.9
1,845,991	+		IAI47_08720	0.22	-0.4
1,846,021	+		IAI47_08720	0.26	+0.3
1,846,021	+		IAI47_08720	0.26	+0.3
1,846,021	+		IAI47_08720	0.26	+0.6
1,846,064	+		IAI47_08720	0.32	+0.3
1,846,065	-		IAI47_08720	0.32	-1.2
1,846,164	+		IAI47_08720	0.44	-1.9
1,846,164	+		IAI47_08720	0.44	+2.3
1,846,164	+		IAI47_08720	0.44	+1.5
1,846,164	+		IAI47_08720	0.44	-0.9
1,846,165	-		IAI47_08720	0.44	-1.7
1,846,165	-		IAI47_08720	0.44	-0.4
1,846,165	-		IAI47_08720	0.44	-1.2
1,846,171	+		IAI47_08720	0.45	+1.3
1,846,172	-		IAI47_08720	0.45	+0.6
1,846,172	-		IAI47_08720	0.45	-0.6
1,846,195	+		IAI47_08720	0.48	+0.3
1,846,195	+		IAI47_08720	0.48	+0.1
1,846,195	+		IAI47_08720	0.48	-0.2
1,846,195	+		IAI47_08720	0.48	+0.3
1,846,196	-		IAI47_08720	0.48	-0.1
1,846,196	-		IAI47_08720	0.48	+1.2
1,846,206	+		IAI47_08720	0.49	+1.1
1,846,206	+		IAI47_08720	0.49	+1.4
1,846,206	+		IAI47_08720	0.49	-1.5
1,846,206	+		IAI47_08720	0.49	-0.6
1,846,206	+		IAI47_08720	0.49	+1.0
1,846,206	+		IAI47_08720	0.49	+3.0
1,846,206	+		IAI47_08720	0.49	+1.1
1,846,206	+		IAI47_08720	0.49	+1.2
1,846,206	+		IAI47_08720	0.49	-0.2
1,846,206	+		IAI47_08720	0.49	+0.3
1,846,207	-		IAI47_08720	0.50	+1.6
1,846,207	-		IAI47_08720	0.50	+0.0
1,846,207	-		IAI47_08720	0.50	-0.6
1,846,207	-		IAI47_08720	0.50	+1.7
1,846,210	+		IAI47_08720	0.50	+1.5
1,846,210	+		IAI47_08720	0.50	-0.7
1,846,210	+		IAI47_08720	0.50	-0.8
1,846,210	+		IAI47_08720	0.50	-1.3
1,846,210	+		IAI47_08720	0.50	-1.4
1,846,210	+		IAI47_08720	0.50	-0.1
1,846,211	-		IAI47_08720	0.50	-1.1
1,846,211	-		IAI47_08720	0.50	+1.3
1,846,211	-		IAI47_08720	0.50	+0.8
1,846,211	-		IAI47_08720	0.50	+2.7
1,846,211	-		IAI47_08720	0.50	+1.1
1,846,230	+		IAI47_08720	0.53	+0.2
1,846,242	+		IAI47_08720	0.54	-0.1
1,846,243	-		IAI47_08720	0.54	-1.6
1,846,243	-		IAI47_08720	0.54	-0.0
1,846,243	-		IAI47_08720	0.54	-0.6
1,846,243	-		IAI47_08720	0.54	-1.0
1,846,257	+		IAI47_08720	0.56	+0.1
1,846,326	+		IAI47_08720	0.65	+0.0
1,846,326	+		IAI47_08720	0.65	-1.3
1,846,326	+		IAI47_08720	0.65	-1.4
1,846,326	+		IAI47_08720	0.65	-2.0
1,846,327	-		IAI47_08720	0.65	-1.0
1,846,338	+		IAI47_08720	0.66	-0.8
1,846,338	+		IAI47_08720	0.66	-1.4
1,846,346	+		IAI47_08720	0.67	+2.0
1,846,396	+		IAI47_08720	0.73	+1.3
1,846,397	-		IAI47_08720	0.74	+0.5
1,846,407	+		IAI47_08720	0.75	+0.9
1,846,488	+		IAI47_08720	0.85	+0.5
1,846,488	+		IAI47_08720	0.85	-1.2
1,846,488	+		IAI47_08720	0.85	-0.3
1,846,488	+		IAI47_08720	0.85	+0.3
1,846,488	+		IAI47_08720	0.85	-1.2
1,846,488	+		IAI47_08720	0.85	+1.7
1,846,489	-		IAI47_08720	0.85	+0.5
1,846,489	-		IAI47_08720	0.85	+2.6
1,846,489	-		IAI47_08720	0.85	+0.4
1,846,489	-		IAI47_08720	0.85	-2.3
1,846,534	+				+1.2
1,846,534	+				-0.4