Strain Fitness in Pantoea sp. MT58 around IAI47_19605

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
149,381	+		IAI47_19595	0.65	+3.5
149,382	-		IAI47_19595	0.66	+3.5
149,394	+		IAI47_19595	0.67	-0.4
149,394	+		IAI47_19595	0.67	-0.6
149,394	+		IAI47_19595	0.67	+1.2
149,394	+		IAI47_19595	0.67	-1.0
149,394	+		IAI47_19595	0.67	-0.4
149,394	+		IAI47_19595	0.67	+0.4
149,394	+		IAI47_19595	0.67	+0.7
149,394	+		IAI47_19595	0.67	-0.2
149,395	-		IAI47_19595	0.67	+0.0
149,395	-		IAI47_19595	0.67	+0.2
149,481	+		IAI47_19595	0.79	+0.1
149,481	+		IAI47_19595	0.79	+1.1
149,481	+		IAI47_19595	0.79	-1.3
149,481	+		IAI47_19595	0.79	+0.5
149,482	-		IAI47_19595	0.79	+0.7
149,482	-		IAI47_19595	0.79	+1.3
149,490	+		IAI47_19595	0.80	-0.7
149,490	+		IAI47_19595	0.80	-0.1
149,490	+		IAI47_19595	0.80	+0.4
149,491	-		IAI47_19595	0.80	+1.9
149,491	-		IAI47_19595	0.80	+0.6
149,515	+		IAI47_19595	0.83	-1.6
149,515	+		IAI47_19595	0.83	-0.5
149,516	-		IAI47_19595	0.83	+1.5
149,516	-		IAI47_19595	0.83	+0.5
149,554	+		IAI47_19595	0.88	-1.3
149,554	+		IAI47_19595	0.88	-0.4
149,554	+		IAI47_19595	0.88	-0.2
149,555	-		IAI47_19595	0.88	+0.7
149,605	+				+1.5
149,605	+				+1.7
149,605	+				+0.9
149,606	-				-2.0
149,606	-				-0.1
149,606	-				+0.8
149,656	+				-0.8
149,656	+				-2.8
149,656	+				+0.0
149,657	-				+3.1
149,657	-				+1.0
149,686	+				+0.8
149,686	+				-0.2
149,686	+				+0.6
149,686	+				+1.9
149,687	-				-0.3
149,687	-				+2.3
149,689	+				-0.4
149,728	+		IAI47_19600	0.12	-1.5
149,728	+		IAI47_19600	0.12	-1.4
149,930	+		IAI47_19600	0.39	-1.1
149,930	+		IAI47_19600	0.39	-0.3
149,930	+		IAI47_19600	0.39	-1.1
149,930	+		IAI47_19600	0.39	+1.2
149,931	-		IAI47_19600	0.40	-0.4
150,029	+		IAI47_19600	0.53	-1.0
150,174	+		IAI47_19600	0.72	+3.8
150,198	+		IAI47_19600	0.76	+0.4
150,199	-		IAI47_19600	0.76	+0.4
150,199	-		IAI47_19600	0.76	-2.0
150,321	+				+0.8
150,321	+				+1.1
150,321	+				+0.3
150,322	-				+0.6
150,345	+				-0.5
150,346	-				-1.7
150,408	+				-0.9
150,520	-		IAI47_19605	0.21	+1.9
150,534	+		IAI47_19605	0.23	+1.4
150,547	+		IAI47_19605	0.25	-0.2
150,548	-		IAI47_19605	0.25	+1.3
150,548	-		IAI47_19605	0.25	-1.1
150,584	-		IAI47_19605	0.30	-1.1
150,584	-		IAI47_19605	0.30	-0.7
150,672	+		IAI47_19605	0.42	+0.4
150,673	-		IAI47_19605	0.42	-0.9
150,716	-		IAI47_19605	0.49	-1.1
150,716	-		IAI47_19605	0.49	+0.0
150,716	-		IAI47_19605	0.49	-1.4
150,716	-		IAI47_19605	0.49	-0.5
150,724	+		IAI47_19605	0.50	+0.2
150,725	-		IAI47_19605	0.50	-0.6
150,831	-		IAI47_19605	0.65	-0.5
150,831	-		IAI47_19605	0.65	-0.1
150,852	+		IAI47_19605	0.68	+1.2
150,853	-		IAI47_19605	0.68	-1.7
150,922	+		IAI47_19605	0.78	-2.2
150,922	+		IAI47_19605	0.78	-0.3
150,922	+		IAI47_19605	0.78	+0.4
150,922	+		IAI47_19605	0.78	-0.7
150,922	+		IAI47_19605	0.78	+0.5
150,922	+		IAI47_19605	0.78	-1.7
150,922	+		IAI47_19605	0.78	-0.2
150,922	+		IAI47_19605	0.78	+1.6
150,922	+		IAI47_19605	0.78	+0.6
150,922	+		IAI47_19605	0.78	+0.3
150,922	+		IAI47_19605	0.78	+0.4
150,922	+		IAI47_19605	0.78	-1.5
150,923	-		IAI47_19605	0.78	-0.9
150,923	-		IAI47_19605	0.78	-0.1
150,923	-		IAI47_19605	0.78	+1.2
150,923	-		IAI47_19605	0.78	-0.3
150,923	-		IAI47_19605	0.78	+0.7
150,937	+		IAI47_19605	0.80	+0.8
150,937	+		IAI47_19605	0.80	+1.6
150,938	-		IAI47_19605	0.80	+0.6
150,965	+		IAI47_19605	0.84	-0.6
150,965	+		IAI47_19605	0.84	-0.5
150,999	+		IAI47_19605	0.89	-2.7
150,999	+		IAI47_19605	0.89	-0.1
150,999	+		IAI47_19605	0.89	-0.6
150,999	+		IAI47_19605	0.89	+1.7
150,999	+		IAI47_19605	0.89	-1.0
150,999	+		IAI47_19605	0.89	-2.7
150,999	+		IAI47_19605	0.89	-0.9
151,000	-		IAI47_19605	0.89	-0.8
151,000	-		IAI47_19605	0.89	-0.8
151,000	-		IAI47_19605	0.89	+1.9
151,000	-		IAI47_19605	0.89	-0.6
151,003	+		IAI47_19605	0.89	+0.2
151,003	+		IAI47_19605	0.89	+1.0
151,004	-		IAI47_19605	0.90	-1.3
151,004	-		IAI47_19605	0.90	+0.8
151,004	-		IAI47_19605	0.90	+0.3
151,004	-		IAI47_19605	0.90	-0.8
151,004	-		IAI47_19605	0.90	-1.2
151,004	-		IAI47_19605	0.90	-0.0
151,045	+				-0.4
151,045	+				-0.1
151,045	+				-2.1
151,045	+				+0.5
151,046	-				+2.5
151,046	-				+0.8
151,088	+				-0.3
151,088	+				+2.4
151,108	-				+0.1
151,108	-				+0.5
151,108	-				+0.5
151,108	-				-1.3
151,108	-				-0.1
151,108	-				-0.3
151,126	+				+1.6
151,126	+				+1.2
151,127	-				-0.2
151,252	-				+0.9
151,252	-				+0.5
151,253	+				+0.5
151,253	+				+0.0
151,253	+				+1.3
151,258	+				+0.5
151,258	+				+0.2
151,258	+				+0.2
151,258	+				+1.1
151,258	+				+0.0
151,258	+				+0.5
151,259	-				-0.6
151,259	-				+0.8
151,259	-				-1.4
151,259	-				-0.7
151,262	+				+0.3
151,263	-				-0.7
151,293	+				-1.5
151,293	+				+1.2
151,294	-				+0.4
151,294	-				+1.5
151,313	-				+1.0
151,373	+				-0.5
151,373	+				+0.9
151,373	+				-0.3
151,391	+				+0.9
151,391	+				+1.0
151,392	-				-1.1
151,392	-				+0.3
151,392	-				-0.2
151,393	+				+0.9
151,393	+				+1.1
151,393	+				-1.2
151,393	+				+1.7
151,393	+				-0.6
151,393	+				+2.1
151,455	+				-0.2
151,455	+				+2.0
151,455	+				-0.7
151,455	+				-1.3
151,455	+				+1.9
151,456	-				+0.8
151,456	-				-0.0
151,459	+				+0.2
151,459	+				+1.3
151,460	-				+2.2
151,460	-				-1.9
151,460	-				+1.5
151,514	+		IAI47_19610	0.11	-0.7
151,514	+		IAI47_19610	0.11	+0.8
151,515	-		IAI47_19610	0.11	+1.9
151,529	+		IAI47_19610	0.12	-2.4
151,529	+		IAI47_19610	0.12	+0.9
151,529	+		IAI47_19610	0.12	+0.0
151,529	+		IAI47_19610	0.12	+0.9
151,530	-		IAI47_19610	0.12	+3.3
151,532	-		IAI47_19610	0.13	+1.2
151,546	-		IAI47_19610	0.13	+0.2
151,580	+		IAI47_19610	0.16	+1.5
151,594	+		IAI47_19610	0.17	-0.1
151,594	+		IAI47_19610	0.17	-0.4
151,594	+		IAI47_19610	0.17	+0.5
151,595	-		IAI47_19610	0.17	-0.7
151,595	-		IAI47_19610	0.17	-0.5
151,595	-		IAI47_19610	0.17	+1.9
151,595	-		IAI47_19610	0.17	-1.3
151,601	+		IAI47_19610	0.17	-1.6
151,607	-		IAI47_19610	0.18	-1.0
151,617	-		IAI47_19610	0.18	+1.1
151,688	-		IAI47_19610	0.23	-2.9
151,696	+		IAI47_19610	0.24	+2.4
151,696	+		IAI47_19610	0.24	+0.0
151,696	+		IAI47_19610	0.24	+0.8
151,697	-		IAI47_19610	0.24	+2.7
151,697	-		IAI47_19610	0.24	-0.1
151,697	-		IAI47_19610	0.24	+0.5
151,697	-		IAI47_19610	0.24	-0.0
151,697	-		IAI47_19610	0.24	-0.9
151,697	-		IAI47_19610	0.24	-0.0
151,697	-		IAI47_19610	0.24	-0.1
151,697	-		IAI47_19610	0.24	-0.5
151,697	-		IAI47_19610	0.24	-0.1
151,697	-		IAI47_19610	0.24	+2.1
151,715	+		IAI47_19610	0.25	+0.2
151,715	+		IAI47_19610	0.25	-1.3
151,715	+		IAI47_19610	0.25	-1.4
151,715	+		IAI47_19610	0.25	-0.4
151,716	-		IAI47_19610	0.25	-0.2
151,716	-		IAI47_19610	0.25	+1.3
151,716	-		IAI47_19610	0.25	-0.1
151,716	-		IAI47_19610	0.25	+1.7
151,716	-		IAI47_19610	0.25	-0.5
151,719	+		IAI47_19610	0.26	-0.8
151,720	-		IAI47_19610	0.26	+2.3
151,720	-		IAI47_19610	0.26	+0.6
151,802	+		IAI47_19610	0.31	+0.8
151,803	-		IAI47_19610	0.31	+1.8
151,846	+		IAI47_19610	0.34	+0.2
151,846	+		IAI47_19610	0.34	+0.5
151,846	+		IAI47_19610	0.34	+0.2
151,847	-		IAI47_19610	0.35	+1.0
151,847	-		IAI47_19610	0.35	-0.0
151,847	-		IAI47_19610	0.35	-0.8
151,849	+		IAI47_19610	0.35	+0.2
151,849	+		IAI47_19610	0.35	-1.2
151,850	-		IAI47_19610	0.35	+0.5
151,948	+		IAI47_19610	0.42	+0.2
151,948	+		IAI47_19610	0.42	+0.3
151,949	-		IAI47_19610	0.42	-1.0
151,957	+		IAI47_19610	0.42	+0.1
151,957	+		IAI47_19610	0.42	+1.5
151,978	+		IAI47_19610	0.44	+0.8
151,980	+		IAI47_19610	0.44	-0.3
151,981	-		IAI47_19610	0.44	+0.4
151,981	-		IAI47_19610	0.44	-1.3
151,983	-		IAI47_19610	0.44	-1.6
151,983	-		IAI47_19610	0.44	+1.4