Strain Fitness in Pantoea sp. MT58 around IAI47_16895

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,579,018	+		IAI47_16890	0.68	-1.5
3,579,018	+		IAI47_16890	0.68	+0.3
3,579,018	+		IAI47_16890	0.68	-2.1
3,579,018	+		IAI47_16890	0.68	-0.1
3,579,019	-		IAI47_16890	0.68	-1.0
3,579,019	-		IAI47_16890	0.68	-0.1
3,579,019	-		IAI47_16890	0.68	-0.5
3,579,019	-		IAI47_16890	0.68	+0.4
3,579,019	-		IAI47_16890	0.68	-0.7
3,579,019	-		IAI47_16890	0.68	-0.3
3,579,019	-		IAI47_16890	0.68	-0.4
3,579,019	-		IAI47_16890	0.68	-0.4
3,579,019	-		IAI47_16890	0.68	+0.3
3,579,019	-		IAI47_16890	0.68	+0.3
3,579,019	-		IAI47_16890	0.68	-0.8
3,579,019	-		IAI47_16890	0.68	+1.0
3,579,157	+		IAI47_16890	0.72	+1.1
3,579,157	+		IAI47_16890	0.72	+0.8
3,579,157	+		IAI47_16890	0.72	-1.5
3,579,158	-		IAI47_16890	0.72	-0.8
3,579,158	-		IAI47_16890	0.72	-0.0
3,579,205	-		IAI47_16890	0.74	-0.7
3,579,205	-		IAI47_16890	0.74	+0.2
3,579,225	+		IAI47_16890	0.75	-0.6
3,579,225	+		IAI47_16890	0.75	-1.1
3,579,225	+		IAI47_16890	0.75	-1.6
3,579,225	+		IAI47_16890	0.75	+1.7
3,579,226	-		IAI47_16890	0.75	+0.8
3,579,226	-		IAI47_16890	0.75	-0.0
3,579,549	+		IAI47_16890	0.85	-1.8
3,579,549	+		IAI47_16890	0.85	-0.2
3,579,549	+		IAI47_16890	0.85	-0.2
3,579,549	+		IAI47_16890	0.85	-1.3
3,579,550	-		IAI47_16890	0.85	-1.1
3,579,550	-		IAI47_16890	0.85	+1.7
3,579,627	+		IAI47_16890	0.88	-0.1
3,579,627	+		IAI47_16890	0.88	+0.1
3,579,627	+		IAI47_16890	0.88	+1.5
3,579,628	-		IAI47_16890	0.88	-0.0
3,579,628	-		IAI47_16890	0.88	+0.6
3,579,628	-		IAI47_16890	0.88	-0.9
3,579,689	+		IAI47_16890	0.90	-0.2
3,579,689	+		IAI47_16890	0.90	-0.9
3,579,689	+		IAI47_16890	0.90	-1.6
3,579,689	+		IAI47_16890	0.90	+0.1
3,579,690	-		IAI47_16890	0.90	+1.7
3,579,690	-		IAI47_16890	0.90	-0.7
3,579,690	-		IAI47_16890	0.90	+0.7
3,579,690	-		IAI47_16890	0.90	-0.1
3,579,781	+				+0.6
3,579,781	+				+0.9
3,579,782	-				-0.4
3,579,782	-				+0.2
3,579,782	-				-0.2
3,579,950	+				-1.9
3,579,991	+				+0.1
3,579,991	+				-2.8
3,579,992	-				-2.0
3,580,088	+				-0.1
3,580,088	+				+0.2
3,580,088	+				-1.0
3,580,088	+				+1.7
3,580,089	-				+0.3
3,580,089	-				-1.4
3,580,302	+				+1.0
3,580,302	+				-0.7
3,580,302	+				+4.1
3,580,302	+				+0.8
3,580,302	+				+0.1
3,580,302	+				+0.9
3,580,302	+				+0.6
3,580,302	+				-0.6
3,580,302	+				-0.6
3,580,303	-				+0.9
3,580,303	-				+1.0
3,580,303	-				-1.1
3,580,303	-				-1.5
3,580,303	-				+1.7
3,580,303	-				+0.3
3,580,303	-				+0.6
3,580,303	-				+0.7
3,580,303	-				+0.1
3,580,303	-				-0.7
3,580,303	-				-1.0
3,580,303	-				+0.8
3,580,479	+		IAI47_16895	0.15	-1.4
3,580,490	+		IAI47_16895	0.15	-1.8
3,580,490	+		IAI47_16895	0.15	-0.6
3,580,504	+		IAI47_16895	0.15	+0.1
3,580,504	+		IAI47_16895	0.15	+0.7
3,580,511	+		IAI47_16895	0.16	-0.6
3,580,511	+		IAI47_16895	0.16	+0.0
3,580,511	+		IAI47_16895	0.16	+1.2
3,580,511	+		IAI47_16895	0.16	+0.8
3,580,511	+		IAI47_16895	0.16	+0.4
3,580,511	+		IAI47_16895	0.16	-0.0
3,580,511	+		IAI47_16895	0.16	-1.2
3,580,511	+		IAI47_16895	0.16	+0.1
3,580,511	+		IAI47_16895	0.16	+3.0
3,580,511	+		IAI47_16895	0.16	-0.7
3,580,511	+		IAI47_16895	0.16	-0.4
3,580,511	+		IAI47_16895	0.16	+0.2
3,580,511	+		IAI47_16895	0.16	-1.6
3,580,511	+		IAI47_16895	0.16	-1.2
3,580,511	+		IAI47_16895	0.16	-0.3
3,580,511	+		IAI47_16895	0.16	-2.2
3,580,511	+		IAI47_16895	0.16	+0.9
3,580,511	+		IAI47_16895	0.16	+0.2
3,580,511	+		IAI47_16895	0.16	-0.7
3,580,511	+		IAI47_16895	0.16	-0.3
3,580,511	+		IAI47_16895	0.16	+1.4
3,580,511	+		IAI47_16895	0.16	+2.0
3,580,511	+		IAI47_16895	0.16	+1.0
3,580,511	+		IAI47_16895	0.16	-0.4
3,580,511	+		IAI47_16895	0.16	-0.0
3,580,511	+		IAI47_16895	0.16	+0.4
3,580,511	+		IAI47_16895	0.16	-1.0
3,580,511	+		IAI47_16895	0.16	-1.0
3,580,511	+		IAI47_16895	0.16	-2.6
3,580,511	+		IAI47_16895	0.16	-0.1
3,580,511	+		IAI47_16895	0.16	+0.5
3,580,511	+		IAI47_16895	0.16	+1.3
3,580,511	+		IAI47_16895	0.16	+0.5
3,580,511	+		IAI47_16895	0.16	-1.7
3,580,511	+		IAI47_16895	0.16	-0.6
3,580,511	+		IAI47_16895	0.16	+0.5
3,580,511	+		IAI47_16895	0.16	-0.2
3,580,511	+		IAI47_16895	0.16	-2.3
3,580,511	+		IAI47_16895	0.16	+0.1
3,580,511	+		IAI47_16895	0.16	+1.3
3,580,511	+		IAI47_16895	0.16	-1.0
3,580,512	-		IAI47_16895	0.16	+2.0
3,580,512	-		IAI47_16895	0.16	+2.0
3,580,512	-		IAI47_16895	0.16	-0.2
3,580,512	-		IAI47_16895	0.16	-1.3
3,580,512	-		IAI47_16895	0.16	-1.7
3,580,512	-		IAI47_16895	0.16	+0.7
3,580,512	-		IAI47_16895	0.16	-0.6
3,580,512	-		IAI47_16895	0.16	+1.1
3,580,512	-		IAI47_16895	0.16	-1.4
3,580,512	-		IAI47_16895	0.16	-0.4
3,580,512	-		IAI47_16895	0.16	-0.5
3,580,512	-		IAI47_16895	0.16	-1.1
3,580,512	-		IAI47_16895	0.16	-2.1
3,580,512	-		IAI47_16895	0.16	-1.0
3,580,512	-		IAI47_16895	0.16	-0.7
3,580,512	-		IAI47_16895	0.16	+0.3
3,580,512	-		IAI47_16895	0.16	-1.5
3,580,512	-		IAI47_16895	0.16	-0.5
3,580,512	-		IAI47_16895	0.16	-2.8
3,580,512	-		IAI47_16895	0.16	-1.3
3,580,512	-		IAI47_16895	0.16	-0.3
3,580,512	-		IAI47_16895	0.16	-1.9
3,580,512	-		IAI47_16895	0.16	+0.8
3,580,512	-		IAI47_16895	0.16	+0.3
3,580,515	+		IAI47_16895	0.16	+1.5
3,580,515	+		IAI47_16895	0.16	+0.2
3,580,515	+		IAI47_16895	0.16	+0.5
3,580,515	+		IAI47_16895	0.16	+0.1
3,580,515	+		IAI47_16895	0.16	+2.1
3,580,515	+		IAI47_16895	0.16	-0.9
3,580,515	+		IAI47_16895	0.16	+0.1
3,580,516	-		IAI47_16895	0.16	-0.7
3,580,516	-		IAI47_16895	0.16	+1.7
3,580,516	-		IAI47_16895	0.16	-0.6
3,580,516	-		IAI47_16895	0.16	-1.9
3,580,516	-		IAI47_16895	0.16	-1.1
3,580,668	-		IAI47_16895	0.20	+2.2
3,580,677	+		IAI47_16895	0.21	-2.7
3,580,677	+		IAI47_16895	0.21	+0.3
3,580,677	+		IAI47_16895	0.21	+0.8
3,580,678	-		IAI47_16895	0.21	+1.1
3,580,678	-		IAI47_16895	0.21	-0.5
3,580,752	+		IAI47_16895	0.23	+0.1
3,580,752	+		IAI47_16895	0.23	+0.8
3,580,752	+		IAI47_16895	0.23	+0.2
3,580,752	+		IAI47_16895	0.23	+0.1
3,580,753	-		IAI47_16895	0.23	-0.3
3,580,753	-		IAI47_16895	0.23	+2.1
3,580,753	-		IAI47_16895	0.23	+1.4
3,580,762	-		IAI47_16895	0.23	-0.0
3,580,767	+		IAI47_16895	0.23	+1.1
3,580,843	+		IAI47_16895	0.26	+0.2
3,580,843	+		IAI47_16895	0.26	-0.1
3,580,843	+		IAI47_16895	0.26	+1.7
3,580,844	-		IAI47_16895	0.26	+0.8
3,580,844	-		IAI47_16895	0.26	+0.2
3,580,928	+		IAI47_16895	0.28	+0.7
3,580,928	+		IAI47_16895	0.28	+1.1
3,580,929	-		IAI47_16895	0.28	-0.2
3,580,929	-		IAI47_16895	0.28	+1.0
3,580,929	-		IAI47_16895	0.28	-0.0
3,580,929	-		IAI47_16895	0.28	+0.9
3,580,961	+		IAI47_16895	0.29	-0.9
3,580,961	+		IAI47_16895	0.29	+0.7
3,580,962	-		IAI47_16895	0.29	-0.1
3,580,991	+		IAI47_16895	0.30	+0.7
3,581,014	-		IAI47_16895	0.31	-1.7
3,581,044	-		IAI47_16895	0.32	+1.4
3,581,044	-		IAI47_16895	0.32	+1.9
3,581,045	+		IAI47_16895	0.32	-0.4
3,581,045	+		IAI47_16895	0.32	+1.0
3,581,045	+		IAI47_16895	0.32	-0.9
3,581,045	+		IAI47_16895	0.32	-0.5
3,581,046	-		IAI47_16895	0.32	-0.4
3,581,046	-		IAI47_16895	0.32	-0.7
3,581,046	-		IAI47_16895	0.32	-0.5
3,581,046	-		IAI47_16895	0.32	+0.4
3,581,046	-		IAI47_16895	0.32	+3.1
3,581,046	-		IAI47_16895	0.32	-0.9
3,581,073	+		IAI47_16895	0.33	-0.3
3,581,074	-		IAI47_16895	0.33	-1.7
3,581,074	-		IAI47_16895	0.33	+3.8
3,581,074	-		IAI47_16895	0.33	+0.1
3,581,076	+		IAI47_16895	0.33	-1.4
3,581,077	-		IAI47_16895	0.33	-0.7
3,581,077	-		IAI47_16895	0.33	+0.5
3,581,077	-		IAI47_16895	0.33	-0.8
3,581,114	+		IAI47_16895	0.34	+1.5
3,581,114	+		IAI47_16895	0.34	+1.6
3,581,114	+		IAI47_16895	0.34	-1.0
3,581,114	+		IAI47_16895	0.34	+0.6
3,581,114	+		IAI47_16895	0.34	-0.1
3,581,115	-		IAI47_16895	0.34	-1.3
3,581,115	-		IAI47_16895	0.34	+1.1
3,581,115	-		IAI47_16895	0.34	-1.6
3,581,142	+		IAI47_16895	0.35	-0.2
3,581,143	-		IAI47_16895	0.35	-1.0
3,581,143	-		IAI47_16895	0.35	-1.0
3,581,143	-		IAI47_16895	0.35	+2.1
3,581,146	+		IAI47_16895	0.35	+2.6
3,581,146	+		IAI47_16895	0.35	-0.8
3,581,146	+		IAI47_16895	0.35	-0.8
3,581,146	+		IAI47_16895	0.35	+0.0
3,581,147	-		IAI47_16895	0.35	-0.6
3,581,147	-		IAI47_16895	0.35	-0.6
3,581,147	-		IAI47_16895	0.35	+1.9
3,581,147	-		IAI47_16895	0.35	-1.0
3,581,158	-		IAI47_16895	0.36	-0.1
3,581,247	-		IAI47_16895	0.38	-0.2
3,581,247	-		IAI47_16895	0.38	-1.0
3,581,300	+		IAI47_16895	0.40	-0.2
3,581,300	+		IAI47_16895	0.40	+0.8
3,581,300	+		IAI47_16895	0.40	+0.7
3,581,346	+		IAI47_16895	0.41	-1.3
3,581,346	+		IAI47_16895	0.41	-0.2
3,581,347	-		IAI47_16895	0.41	-2.0
3,581,347	-		IAI47_16895	0.41	-0.1
3,581,347	-		IAI47_16895	0.41	-0.7
3,581,388	+		IAI47_16895	0.43	+0.0
3,581,388	+		IAI47_16895	0.43	+0.7
3,581,388	+		IAI47_16895	0.43	+0.2
3,581,401	+		IAI47_16895	0.43	-0.1
3,581,401	+		IAI47_16895	0.43	-0.6
3,581,402	-		IAI47_16895	0.43	+2.7
3,581,524	-		IAI47_16895	0.47	+1.4
3,581,550	+		IAI47_16895	0.48	-0.2
3,581,550	+		IAI47_16895	0.48	-0.0
3,581,550	+		IAI47_16895	0.48	-0.6
3,581,550	+		IAI47_16895	0.48	-1.2
3,581,550	+		IAI47_16895	0.48	+0.6
3,581,550	+		IAI47_16895	0.48	-1.7
3,581,551	-		IAI47_16895	0.48	+1.5
3,581,551	-		IAI47_16895	0.48	+0.5
3,581,607	+		IAI47_16895	0.49	+0.1
3,581,607	+		IAI47_16895	0.49	-0.2
3,581,607	+		IAI47_16895	0.49	+0.3
3,581,607	+		IAI47_16895	0.49	-0.8
3,581,607	+		IAI47_16895	0.49	+1.1
3,581,607	+		IAI47_16895	0.49	+0.6
3,581,607	+		IAI47_16895	0.49	-0.7
3,581,607	+		IAI47_16895	0.49	-1.0
3,581,608	-		IAI47_16895	0.49	+0.4
3,581,608	-		IAI47_16895	0.49	-0.1
3,581,608	-		IAI47_16895	0.49	-0.1
3,581,608	-		IAI47_16895	0.49	-0.2
3,581,608	-		IAI47_16895	0.49	+0.7
3,581,608	-		IAI47_16895	0.49	+0.8
3,581,608	-		IAI47_16895	0.49	-1.3
3,581,608	-		IAI47_16895	0.49	+1.1
3,581,608	-		IAI47_16895	0.49	-0.9
3,581,608	-		IAI47_16895	0.49	-1.1
3,581,608	-		IAI47_16895	0.49	-0.6
3,581,609	+		IAI47_16895	0.49	+0.3
3,581,609	+		IAI47_16895	0.49	-1.7
3,581,609	+		IAI47_16895	0.49	-1.0
3,581,609	+		IAI47_16895	0.49	-0.1
3,581,609	+		IAI47_16895	0.49	+0.3
3,581,609	+		IAI47_16895	0.49	-2.2
3,581,609	+		IAI47_16895	0.49	-0.7
3,581,609	+		IAI47_16895	0.49	+1.2
3,581,609	+		IAI47_16895	0.49	-0.7
3,581,610	-		IAI47_16895	0.50	-1.4
3,581,610	-		IAI47_16895	0.50	+1.1
3,581,610	-		IAI47_16895	0.50	-0.9
3,581,610	-		IAI47_16895	0.50	-1.6
3,581,610	-		IAI47_16895	0.50	+0.1
3,581,610	-		IAI47_16895	0.50	+0.5
3,581,610	-		IAI47_16895	0.50	-0.5
3,581,610	-		IAI47_16895	0.50	+1.6
3,581,610	-		IAI47_16895	0.50	+0.4
3,581,610	-		IAI47_16895	0.50	-0.7
3,581,610	-		IAI47_16895	0.50	-0.2
3,581,610	-		IAI47_16895	0.50	+0.3
3,581,670	+		IAI47_16895	0.51	-2.4
3,581,670	+		IAI47_16895	0.51	+1.2
3,581,670	+		IAI47_16895	0.51	-0.7
3,581,670	+		IAI47_16895	0.51	-0.5
3,581,670	+		IAI47_16895	0.51	-0.0
3,581,671	-		IAI47_16895	0.51	+1.7
3,581,671	-		IAI47_16895	0.51	+0.6
3,581,671	-		IAI47_16895	0.51	+0.5
3,581,674	+		IAI47_16895	0.51	-0.7
3,581,674	+		IAI47_16895	0.51	-1.0
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