Strain Fitness in Pantoea sp. MT58 around IAI47_16060

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,395,270	+		IAI47_16055	0.67	-0.2
3,395,312	-		IAI47_16055	0.69	-0.8
3,395,429	-		IAI47_16055	0.73	+1.1
3,395,429	-		IAI47_16055	0.73	-0.6
3,395,474	-		IAI47_16055	0.74	-3.5
3,395,486	-		IAI47_16055	0.75	-1.6
3,395,486	-		IAI47_16055	0.75	-1.1
3,395,519	-		IAI47_16055	0.76	-0.4
3,395,632	+		IAI47_16055	0.80	-0.7
3,395,633	-		IAI47_16055	0.80	+0.2
3,395,633	-		IAI47_16055	0.80	-1.3
3,395,644	+		IAI47_16055	0.80	+0.5
3,395,645	-		IAI47_16055	0.80	-0.4
3,395,645	-		IAI47_16055	0.80	-0.0
3,395,771	+		IAI47_16055	0.85	-1.0
3,395,771	+		IAI47_16055	0.85	-2.9
3,395,771	+		IAI47_16055	0.85	-1.1
3,395,771	+		IAI47_16055	0.85	-0.9
3,395,771	+		IAI47_16055	0.85	-0.8
3,395,772	-		IAI47_16055	0.85	-1.8
3,395,772	-		IAI47_16055	0.85	-0.6
3,395,772	-		IAI47_16055	0.85	-1.6
3,395,772	-		IAI47_16055	0.85	-2.3
3,395,772	-		IAI47_16055	0.85	-0.0
3,395,772	-		IAI47_16055	0.85	+1.7
3,395,772	-		IAI47_16055	0.85	+0.3
3,395,772	-		IAI47_16055	0.85	-0.5
3,395,772	-		IAI47_16055	0.85	-1.7
3,395,772	-		IAI47_16055	0.85	-2.3
3,395,772	-		IAI47_16055	0.85	+0.7
3,395,772	-		IAI47_16055	0.85	-0.9
3,395,851	+		IAI47_16055	0.87	-1.4
3,395,852	-		IAI47_16055	0.87	+0.2
3,395,863	+		IAI47_16055	0.88	+0.3
3,395,864	-		IAI47_16055	0.88	+0.6
3,395,897	-		IAI47_16055	0.89	-1.4
3,395,935	+				-0.4
3,395,936	-				-1.1
3,396,076	+				-0.9
3,396,076	+				-1.2
3,396,218	+				+0.6
3,396,218	+				-0.3
3,396,219	-				+1.8
3,396,219	-				+2.9
3,396,244	-				-0.7
3,396,244	-				-1.7
3,396,269	+				-0.4
3,396,269	+				+0.4
3,396,269	+				+0.5
3,396,269	+				+0.0
3,396,269	+				-0.5
3,396,269	+				-1.7
3,396,269	+				+0.3
3,396,269	+				-1.3
3,396,269	+				+1.3
3,396,270	-				-1.1
3,396,270	-				+0.3
3,396,270	-				+1.3
3,396,270	-				-1.6
3,396,270	-				-1.8
3,396,305	+				-1.1
3,396,305	+				+1.3
3,396,305	+				-1.0
3,396,319	+				+1.7
3,396,319	+				-1.6
3,396,319	+				+1.9
3,396,319	+				+1.1
3,396,319	+				+1.0
3,396,319	+				+0.3
3,396,320	-				-1.0
3,396,320	-				-1.5
3,396,320	-				-1.1
3,396,320	-				+0.3
3,396,386	-		IAI47_16060	0.19	-1.1
3,396,386	-		IAI47_16060	0.19	+0.7
3,396,386	-		IAI47_16060	0.19	+1.4
3,396,402	+		IAI47_16060	0.22	-0.3
3,396,402	+		IAI47_16060	0.22	-0.1
3,396,402	+		IAI47_16060	0.22	+1.1
3,396,403	-		IAI47_16060	0.22	+0.1
3,396,403	-		IAI47_16060	0.22	-2.3
3,396,403	-		IAI47_16060	0.22	-0.8
3,396,403	-		IAI47_16060	0.22	-1.6
3,396,539	+		IAI47_16060	0.43	+0.5
3,396,539	+		IAI47_16060	0.43	-1.5
3,396,539	+		IAI47_16060	0.43	+0.8
3,396,539	+		IAI47_16060	0.43	-1.9
3,396,540	-		IAI47_16060	0.43	-0.6
3,396,540	-		IAI47_16060	0.43	-0.7
3,396,540	-		IAI47_16060	0.43	+1.9
3,396,540	-		IAI47_16060	0.43	-0.2
3,396,540	-		IAI47_16060	0.43	+0.4
3,396,668	+		IAI47_16060	0.62	-0.2
3,396,683	+		IAI47_16060	0.65	-0.1
3,396,700	+		IAI47_16060	0.67	+0.8
3,396,701	-		IAI47_16060	0.67	+0.9
3,396,701	-		IAI47_16060	0.67	+0.5
3,396,701	-		IAI47_16060	0.67	+1.4
3,396,716	-		IAI47_16060	0.70	+1.6
3,396,716	-		IAI47_16060	0.70	-0.6
3,396,716	-		IAI47_16060	0.70	-0.9
3,396,725	-		IAI47_16060	0.71	-0.6
3,396,744	+		IAI47_16060	0.74	-1.1
3,396,744	+		IAI47_16060	0.74	+0.5
3,396,745	-		IAI47_16060	0.74	-0.8
3,396,745	-		IAI47_16060	0.74	+0.8
3,396,745	-		IAI47_16060	0.74	+0.7
3,396,745	-		IAI47_16060	0.74	+0.9
3,396,754	+		IAI47_16060	0.76	+1.1
3,396,754	+		IAI47_16060	0.76	+0.5
3,396,754	+		IAI47_16060	0.76	+0.1
3,396,754	+		IAI47_16060	0.76	-0.3
3,396,754	+		IAI47_16060	0.76	+0.7
3,396,754	+		IAI47_16060	0.76	-0.8
3,396,754	+		IAI47_16060	0.76	+0.4
3,396,754	+		IAI47_16060	0.76	-0.4
3,396,754	+		IAI47_16060	0.76	-0.8
3,396,754	+		IAI47_16060	0.76	-0.7
3,396,755	-		IAI47_16060	0.76	+1.1
3,396,755	-		IAI47_16060	0.76	-0.4
3,396,755	-		IAI47_16060	0.76	-0.3
3,396,755	-		IAI47_16060	0.76	+0.3
3,396,755	-		IAI47_16060	0.76	-0.7
3,396,755	-		IAI47_16060	0.76	-0.5
3,396,755	-		IAI47_16060	0.76	+0.1
3,396,755	-		IAI47_16060	0.76	-1.5
3,396,755	-		IAI47_16060	0.76	-0.2
3,396,755	-		IAI47_16060	0.76	-1.1
3,396,794	+		IAI47_16060	0.82	-0.1
3,396,794	+		IAI47_16060	0.82	-0.4
3,396,794	+		IAI47_16060	0.82	-0.5
3,396,794	+		IAI47_16060	0.82	-0.7
3,396,794	+		IAI47_16060	0.82	-0.1
3,396,794	+		IAI47_16060	0.82	+2.8
3,396,794	+		IAI47_16060	0.82	-0.7
3,396,794	+		IAI47_16060	0.82	-0.3
3,396,794	+		IAI47_16060	0.82	-1.2
3,396,795	-		IAI47_16060	0.82	-1.0
3,396,795	-		IAI47_16060	0.82	-0.2
3,396,795	-		IAI47_16060	0.82	-0.7
3,396,795	-		IAI47_16060	0.82	+0.1
3,396,795	-		IAI47_16060	0.82	+0.2
3,396,795	-		IAI47_16060	0.82	+1.7
3,396,795	-		IAI47_16060	0.82	-1.5
3,396,831	+		IAI47_16060	0.87	+0.1
3,396,831	+		IAI47_16060	0.87	-0.3
3,396,832	-		IAI47_16060	0.87	+0.1
3,396,853	+				-0.3
3,396,853	+				-0.0
3,396,854	-				-0.7
3,396,854	-				-0.4
3,396,854	-				+1.4
3,396,854	-				-0.3
3,396,854	-				+0.9
3,396,854	-				+1.2
3,396,854	-				+0.9
3,396,854	-				+0.9
3,396,878	-				+0.7
3,396,911	+				-0.4
3,396,911	+				+0.6
3,396,911	+				+1.5
3,396,911	+				+0.5
3,396,911	+				-1.4
3,396,912	-				-0.8
3,396,912	-				-0.8
3,396,912	-				+2.6
3,396,918	+				+1.4
3,396,978	+				-0.7
3,396,978	+				-0.4
3,396,979	-				+0.6
3,397,012	-				+0.8
3,397,087	+		IAI47_16065	0.14	+1.8
3,397,087	+		IAI47_16065	0.14	+2.0
3,397,087	+		IAI47_16065	0.14	+1.4
3,397,087	+		IAI47_16065	0.14	+0.8
3,397,088	-		IAI47_16065	0.14	-1.7
3,397,088	-		IAI47_16065	0.14	+0.6
3,397,129	+		IAI47_16065	0.19	-0.1
3,397,130	-		IAI47_16065	0.19	+0.2
3,397,320	+		IAI47_16065	0.42	+1.0
3,397,320	+		IAI47_16065	0.42	-1.3
3,397,320	+		IAI47_16065	0.42	-0.7
3,397,320	+		IAI47_16065	0.42	-0.6
3,397,320	+		IAI47_16065	0.42	-1.3
3,397,320	+		IAI47_16065	0.42	+0.1
3,397,320	+		IAI47_16065	0.42	-0.7
3,397,320	+		IAI47_16065	0.42	+0.6
3,397,321	-		IAI47_16065	0.42	-1.1
3,397,325	+		IAI47_16065	0.43	-1.2
3,397,325	+		IAI47_16065	0.43	-0.4
3,397,325	+		IAI47_16065	0.43	+0.0
3,397,325	+		IAI47_16065	0.43	-1.6
3,397,325	+		IAI47_16065	0.43	+0.9
3,397,326	-		IAI47_16065	0.43	+1.0
3,397,326	-		IAI47_16065	0.43	-0.6
3,397,326	-		IAI47_16065	0.43	-2.3
3,397,326	-		IAI47_16065	0.43	-0.9
3,397,326	-		IAI47_16065	0.43	+1.3
3,397,471	+		IAI47_16065	0.61	-0.3
3,397,471	+		IAI47_16065	0.61	+0.5
3,397,471	+		IAI47_16065	0.61	+1.7
3,397,471	+		IAI47_16065	0.61	+0.2
3,397,471	+		IAI47_16065	0.61	-1.6
3,397,472	-		IAI47_16065	0.61	-0.1
3,397,472	-		IAI47_16065	0.61	+1.6
3,397,472	-		IAI47_16065	0.61	+1.3
3,397,472	-		IAI47_16065	0.61	+1.9
3,397,645	+		IAI47_16065	0.82	+2.3
3,397,645	+		IAI47_16065	0.82	-0.3
3,397,646	-		IAI47_16065	0.83	-1.9
3,397,656	+		IAI47_16065	0.84	+1.6
3,397,656	+		IAI47_16065	0.84	-1.3
3,397,657	-		IAI47_16065	0.84	+0.7
3,397,657	-		IAI47_16065	0.84	+0.7
3,397,679	+		IAI47_16065	0.87	+0.1
3,397,679	+		IAI47_16065	0.87	+3.8
3,397,679	+		IAI47_16065	0.87	+0.7
3,397,679	+		IAI47_16065	0.87	-0.6
3,397,680	-		IAI47_16065	0.87	-1.9
3,397,680	-		IAI47_16065	0.87	-0.2
3,397,693	+		IAI47_16065	0.88	-0.2
3,397,693	+		IAI47_16065	0.88	-1.4
3,397,694	-		IAI47_16065	0.89	+0.2
3,397,694	-		IAI47_16065	0.89	+0.1
3,397,720	+				+1.4
3,397,720	+				-0.6
3,397,720	+				-0.1
3,397,745	+				-0.8
3,397,745	+				-0.3
3,397,746	-				-2.0
3,397,746	-				+0.2
3,397,765	+				+2.3
3,397,786	+				+1.9
3,397,786	+				-0.8
3,397,787	-				-0.8
3,397,827	+				-1.2
3,397,828	-				+0.1
3,397,828	-				-0.4
3,397,832	+				+0.6
3,397,832	+				+1.2
3,397,832	+				-1.0
3,397,832	+				+0.7
3,397,832	+				-0.4
3,397,832	+				+0.8
3,397,832	+				-0.1
3,397,832	+				-0.1
3,397,832	+				+0.2
3,397,833	-				-0.5
3,397,833	-				+1.0
3,397,833	-				-0.8
3,397,833	-				-0.7
3,397,833	-				-0.7
3,397,833	-				-0.7
3,397,843	+				+1.3
3,397,843	+				+0.9
3,397,843	+				+1.5
3,397,843	+				+2.0
3,397,844	-				+0.7
3,397,844	-				+1.5
3,397,881	+				-0.7
3,397,881	+				+1.9
3,397,882	-				-1.8
3,397,882	-				-1.7
3,397,882	-				-1.0
3,397,905	+				-0.6
3,397,905	+				+0.6
3,397,905	+				-0.7
3,397,905	+				+0.1
3,397,910	+				+0.3
3,397,910	+				+0.8
3,397,910	+				-1.3
3,397,910	+				-0.0
3,397,910	+				+1.6
3,397,910	+				+1.1
3,397,910	+				+1.4