Strain Fitness in Pantoea sp. MT58 around IAI47_13505

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,862,991	+				+0.2
2,862,992	-				+0.1
2,863,046	+				-0.7
2,863,046	+				+1.4
2,863,073	-				-1.4
2,863,082	+				-1.3
2,863,082	+				-0.6
2,863,082	+				+1.0
2,863,082	+				+0.3
2,863,082	+				+0.4
2,863,083	-				-1.0
2,863,083	-				+0.5
2,863,142	-				-0.2
2,863,190	+		IAI47_13500	0.12	+0.8
2,863,271	+		IAI47_13500	0.20	-0.0
2,863,271	+		IAI47_13500	0.20	-0.2
2,863,271	+		IAI47_13500	0.20	-1.5
2,863,271	+		IAI47_13500	0.20	-0.0
2,863,271	+		IAI47_13500	0.20	-0.4
2,863,271	+		IAI47_13500	0.20	+1.5
2,863,272	-		IAI47_13500	0.20	+0.2
2,863,272	-		IAI47_13500	0.20	-0.5
2,863,272	-		IAI47_13500	0.20	+0.9
2,863,272	-		IAI47_13500	0.20	-0.7
2,863,326	+		IAI47_13500	0.26	+0.1
2,863,326	+		IAI47_13500	0.26	-0.0
2,863,405	+		IAI47_13500	0.35	-2.1
2,863,405	+		IAI47_13500	0.35	-0.1
2,863,405	+		IAI47_13500	0.35	+0.6
2,863,405	+		IAI47_13500	0.35	+1.9
2,863,405	+		IAI47_13500	0.35	-1.4
2,863,406	-		IAI47_13500	0.35	+0.6
2,863,406	-		IAI47_13500	0.35	-0.4
2,863,406	-		IAI47_13500	0.35	-0.7
2,863,424	+		IAI47_13500	0.37	-1.3
2,863,425	-		IAI47_13500	0.37	-0.0
2,863,427	+		IAI47_13500	0.37	+0.2
2,863,428	-		IAI47_13500	0.37	+0.7
2,863,428	-		IAI47_13500	0.37	+2.0
2,863,514	+		IAI47_13500	0.47	+1.0
2,863,514	+		IAI47_13500	0.47	-1.0
2,863,514	+		IAI47_13500	0.47	-1.4
2,863,515	-		IAI47_13500	0.47	+0.3
2,863,515	-		IAI47_13500	0.47	+0.7
2,863,515	-		IAI47_13500	0.47	-0.7
2,863,515	-		IAI47_13500	0.47	+1.5
2,863,515	-		IAI47_13500	0.47	-1.4
2,863,517	+		IAI47_13500	0.47	-1.3
2,863,517	+		IAI47_13500	0.47	-0.3
2,863,518	-		IAI47_13500	0.47	+0.2
2,863,518	-		IAI47_13500	0.47	-1.2
2,863,518	-		IAI47_13500	0.47	+0.4
2,863,518	-		IAI47_13500	0.47	+1.4
2,863,524	+		IAI47_13500	0.48	-0.9
2,863,524	+		IAI47_13500	0.48	+0.8
2,863,618	+		IAI47_13500	0.58	+0.3
2,863,618	+		IAI47_13500	0.58	+0.4
2,863,619	-		IAI47_13500	0.58	-0.0
2,863,619	-		IAI47_13500	0.58	+1.3
2,863,659	+		IAI47_13500	0.62	+1.5
2,863,793	+		IAI47_13500	0.77	+0.5
2,863,794	-		IAI47_13500	0.77	-1.9
2,863,815	+		IAI47_13500	0.79	-0.7
2,863,815	+		IAI47_13500	0.79	-0.0
2,863,815	+		IAI47_13500	0.79	-0.0
2,863,815	+		IAI47_13500	0.79	-1.0
2,863,815	+		IAI47_13500	0.79	+2.3
2,863,815	+		IAI47_13500	0.79	+0.9
2,863,815	+		IAI47_13500	0.79	+0.1
2,863,815	+		IAI47_13500	0.79	+0.1
2,863,815	+		IAI47_13500	0.79	-0.4
2,863,816	-		IAI47_13500	0.79	-1.7
2,863,816	-		IAI47_13500	0.79	+2.5
2,863,816	-		IAI47_13500	0.79	+3.8
2,863,816	-		IAI47_13500	0.79	+0.2
2,863,926	+				-2.0
2,863,927	-				-0.6
2,863,945	+				-2.1
2,863,945	+				-0.0
2,863,945	+				-0.1
2,863,945	+				+0.1
2,863,946	-				-0.9
2,863,946	-				+2.1
2,863,948	+				+1.5
2,863,948	+				-0.5
2,863,949	-				+1.4
2,863,949	-				-0.7
2,863,992	-				+0.7
2,864,004	+				-2.7
2,864,132	-				-1.1
2,864,203	+		IAI47_13505	0.11	+1.9
2,864,204	-		IAI47_13505	0.11	+1.1
2,864,204	-		IAI47_13505	0.11	-1.7
2,864,204	-		IAI47_13505	0.11	-0.0
2,864,211	+		IAI47_13505	0.11	-0.1
2,864,211	+		IAI47_13505	0.11	-0.0
2,864,212	-		IAI47_13505	0.11	+0.9
2,864,226	+		IAI47_13505	0.12	-0.8
2,864,226	+		IAI47_13505	0.12	+0.9
2,864,226	+		IAI47_13505	0.12	+0.5
2,864,227	-		IAI47_13505	0.12	-2.6
2,864,281	+		IAI47_13505	0.14	+1.8
2,864,281	+		IAI47_13505	0.14	-0.1
2,864,282	-		IAI47_13505	0.14	-1.0
2,864,282	-		IAI47_13505	0.14	-0.5
2,864,340	+		IAI47_13505	0.17	-1.4
2,864,367	+		IAI47_13505	0.19	+1.2
2,864,379	+		IAI47_13505	0.19	-0.7
2,864,379	+		IAI47_13505	0.19	-0.7
2,864,380	-		IAI47_13505	0.19	-2.2
2,864,380	-		IAI47_13505	0.19	+1.0
2,864,380	-		IAI47_13505	0.19	-0.1
2,864,497	+		IAI47_13505	0.25	-1.6
2,864,497	+		IAI47_13505	0.25	+0.3
2,864,498	-		IAI47_13505	0.25	+1.2
2,864,498	-		IAI47_13505	0.25	-2.1
2,864,498	-		IAI47_13505	0.25	-3.2
2,864,498	-		IAI47_13505	0.25	-0.0
2,864,536	+		IAI47_13505	0.27	-2.4
2,864,536	+		IAI47_13505	0.27	-1.7
2,864,536	+		IAI47_13505	0.27	-0.9
2,864,536	+		IAI47_13505	0.27	+0.4
2,864,536	+		IAI47_13505	0.27	-1.5
2,864,537	-		IAI47_13505	0.27	-1.5
2,864,537	-		IAI47_13505	0.27	-2.1
2,864,537	-		IAI47_13505	0.27	+0.1
2,864,537	-		IAI47_13505	0.27	-2.0
2,864,537	-		IAI47_13505	0.27	-0.1
2,864,537	-		IAI47_13505	0.27	+0.8
2,864,537	-		IAI47_13505	0.27	-0.9
2,864,547	+		IAI47_13505	0.28	-0.4
2,864,548	-		IAI47_13505	0.28	+0.3
2,864,556	+		IAI47_13505	0.28	+1.2
2,864,557	-		IAI47_13505	0.28	-1.7
2,864,588	+		IAI47_13505	0.30	-1.4
2,864,588	+		IAI47_13505	0.30	-1.1
2,864,588	+		IAI47_13505	0.30	-0.1
2,864,588	+		IAI47_13505	0.30	+0.4
2,864,588	+		IAI47_13505	0.30	-1.7
2,864,766	+		IAI47_13505	0.38	-1.7
2,864,767	-		IAI47_13505	0.38	-1.5
2,864,773	+		IAI47_13505	0.39	-1.7
2,864,773	+		IAI47_13505	0.39	-0.8
2,864,773	+		IAI47_13505	0.39	-0.0
2,864,773	+		IAI47_13505	0.39	+0.1
2,864,773	+		IAI47_13505	0.39	-0.2
2,864,773	+		IAI47_13505	0.39	-1.2
2,864,773	+		IAI47_13505	0.39	+0.3
2,864,774	-		IAI47_13505	0.39	+0.5
2,864,774	-		IAI47_13505	0.39	+0.8
2,864,774	-		IAI47_13505	0.39	+1.0
2,864,774	-		IAI47_13505	0.39	-0.0
2,864,774	-		IAI47_13505	0.39	-1.5
2,864,774	-		IAI47_13505	0.39	+0.2
2,864,774	-		IAI47_13505	0.39	-0.5
2,864,816	+		IAI47_13505	0.41	-3.2
2,864,816	+		IAI47_13505	0.41	-2.2
2,864,816	+		IAI47_13505	0.41	-1.4
2,864,816	+		IAI47_13505	0.41	-1.1
2,864,816	+		IAI47_13505	0.41	-1.1
2,864,816	+		IAI47_13505	0.41	-0.5
2,864,817	-		IAI47_13505	0.41	-1.0
2,864,817	-		IAI47_13505	0.41	-1.5
2,864,840	+		IAI47_13505	0.42	-0.3
2,864,840	+		IAI47_13505	0.42	+0.5
2,864,840	+		IAI47_13505	0.42	-0.3
2,864,840	+		IAI47_13505	0.42	-1.3
2,864,840	+		IAI47_13505	0.42	-2.3
2,864,840	+		IAI47_13505	0.42	-2.0
2,864,840	+		IAI47_13505	0.42	-1.5
2,864,840	+		IAI47_13505	0.42	-0.6
2,864,840	+		IAI47_13505	0.42	+0.1
2,864,840	+		IAI47_13505	0.42	-1.3
2,864,840	+		IAI47_13505	0.42	-1.1
2,864,840	+		IAI47_13505	0.42	-1.2
2,864,840	+		IAI47_13505	0.42	-1.8
2,864,840	+		IAI47_13505	0.42	-1.8
2,864,841	-		IAI47_13505	0.42	+0.3
2,864,841	-		IAI47_13505	0.42	-0.3
2,864,841	-		IAI47_13505	0.42	-0.7
2,864,841	-		IAI47_13505	0.42	+0.1
2,864,841	-		IAI47_13505	0.42	-2.6
2,864,841	-		IAI47_13505	0.42	-1.6
2,864,841	-		IAI47_13505	0.42	-1.5
2,864,841	-		IAI47_13505	0.42	-0.5
2,864,841	-		IAI47_13505	0.42	-2.6
2,864,841	-		IAI47_13505	0.42	+2.8
2,864,921	+		IAI47_13505	0.46	-0.4
2,864,921	+		IAI47_13505	0.46	-0.0
2,864,960	+		IAI47_13505	0.48	-0.5
2,864,960	+		IAI47_13505	0.48	-1.8
2,864,960	+		IAI47_13505	0.48	+0.2
2,864,960	+		IAI47_13505	0.48	-0.0
2,864,960	+		IAI47_13505	0.48	-0.2
2,864,960	+		IAI47_13505	0.48	-0.5
2,864,960	+		IAI47_13505	0.48	-0.3
2,864,961	-		IAI47_13505	0.48	+0.2
2,864,961	-		IAI47_13505	0.48	-1.0
2,864,961	-		IAI47_13505	0.48	-2.7
2,865,004	+		IAI47_13505	0.50	-0.8
2,865,005	-		IAI47_13505	0.50	-0.8
2,865,005	-		IAI47_13505	0.50	-0.2
2,865,029	+		IAI47_13505	0.51	-1.5
2,865,029	+		IAI47_13505	0.51	-0.4
2,865,030	-		IAI47_13505	0.51	-0.1
2,865,030	-		IAI47_13505	0.51	-1.0
2,865,077	+		IAI47_13505	0.54	-0.8
2,865,086	+		IAI47_13505	0.54	+0.9
2,865,086	+		IAI47_13505	0.54	-1.4
2,865,087	-		IAI47_13505	0.54	-0.8
2,865,087	-		IAI47_13505	0.54	-0.0
2,865,087	-		IAI47_13505	0.54	-0.8
2,865,087	-		IAI47_13505	0.54	-0.7
2,865,107	+		IAI47_13505	0.55	-1.7
2,865,108	-		IAI47_13505	0.55	-0.0
2,865,154	-		IAI47_13505	0.58	-0.8
2,865,177	+		IAI47_13505	0.59	-1.2
2,865,177	+		IAI47_13505	0.59	+1.0
2,865,177	+		IAI47_13505	0.59	-0.7
2,865,177	+		IAI47_13505	0.59	-0.4
2,865,177	+		IAI47_13505	0.59	-1.9
2,865,178	-		IAI47_13505	0.59	+0.6
2,865,178	-		IAI47_13505	0.59	-0.9
2,865,181	-		IAI47_13505	0.59	+2.0
2,865,225	+		IAI47_13505	0.61	-0.8
2,865,225	+		IAI47_13505	0.61	+0.6
2,865,225	+		IAI47_13505	0.61	+0.3
2,865,226	-		IAI47_13505	0.61	+0.5
2,865,226	-		IAI47_13505	0.61	-1.7
2,865,226	-		IAI47_13505	0.61	+2.8
2,865,266	+		IAI47_13505	0.63	-0.6
2,865,266	+		IAI47_13505	0.63	-0.1
2,865,266	+		IAI47_13505	0.63	-0.2
2,865,266	+		IAI47_13505	0.63	-0.1
2,865,266	+		IAI47_13505	0.63	-0.4
2,865,266	+		IAI47_13505	0.63	+1.6
2,865,267	-		IAI47_13505	0.63	-1.3
2,865,267	-		IAI47_13505	0.63	-1.2
2,865,267	-		IAI47_13505	0.63	-0.6
2,865,267	-		IAI47_13505	0.63	-0.4
2,865,281	+		IAI47_13505	0.64	-0.4
2,865,288	+		IAI47_13505	0.64	-0.5
2,865,288	+		IAI47_13505	0.64	-0.3
2,865,384	+		IAI47_13505	0.69	-0.5
2,865,385	-		IAI47_13505	0.69	+0.2
2,865,385	-		IAI47_13505	0.69	-1.8
2,865,385	-		IAI47_13505	0.69	+0.2
2,865,408	+		IAI47_13505	0.70	-1.1
2,865,409	-		IAI47_13505	0.70	-1.9
2,865,439	-		IAI47_13505	0.72	-0.3
2,865,462	+		IAI47_13505	0.73	-0.6
2,865,470	+		IAI47_13505	0.73	-1.9
2,865,470	+		IAI47_13505	0.73	-1.0
2,865,470	+		IAI47_13505	0.73	+1.1
2,865,470	+		IAI47_13505	0.73	+0.8
2,865,471	-		IAI47_13505	0.73	+1.8
2,865,501	+		IAI47_13505	0.75	-2.3
2,865,501	+		IAI47_13505	0.75	-1.8
2,865,501	+		IAI47_13505	0.75	-2.8
2,865,501	+		IAI47_13505	0.75	+0.8
2,865,501	+		IAI47_13505	0.75	-3.0
2,865,502	-		IAI47_13505	0.75	-1.0
2,865,502	-		IAI47_13505	0.75	+0.6
2,865,502	-		IAI47_13505	0.75	-2.7
2,865,502	-		IAI47_13505	0.75	-0.3
2,865,502	-		IAI47_13505	0.75	-0.6
2,865,502	-		IAI47_13505	0.75	+0.2
2,865,502	-		IAI47_13505	0.75	-0.8
2,865,513	+		IAI47_13505	0.75	-0.4
2,865,513	+		IAI47_13505	0.75	-0.0
2,865,513	+		IAI47_13505	0.75	-0.6
2,865,513	+		IAI47_13505	0.75	+0.6
2,865,513	+		IAI47_13505	0.75	-1.4
2,865,513	+		IAI47_13505	0.75	-1.9
2,865,513	+		IAI47_13505	0.75	-1.2
2,865,514	-		IAI47_13505	0.75	+0.8
2,865,514	-		IAI47_13505	0.75	-1.7
2,865,514	-		IAI47_13505	0.75	-1.4
2,865,514	-		IAI47_13505	0.75	+4.0
2,865,551	+		IAI47_13505	0.77	+0.6
2,865,551	+		IAI47_13505	0.77	-2.2
2,865,552	-		IAI47_13505	0.77	+1.2
2,865,552	-		IAI47_13505	0.77	+0.4
2,865,575	+		IAI47_13505	0.78	-2.3
2,865,575	+		IAI47_13505	0.78	-2.9
2,865,575	+		IAI47_13505	0.78	-0.8
2,865,575	+				-0.7
2,865,576	-		IAI47_13505	0.78	-0.5
2,865,576	-		IAI47_13505	0.78	+0.3
2,865,576	-		IAI47_13505	0.78	+0.1
2,865,576	-		IAI47_13505	0.78	-0.6
2,865,576	-		IAI47_13505	0.78	+0.8
2,865,576	-		IAI47_13505	0.78	+0.9
2,865,576	-		IAI47_13505	0.78	+0.9
2,865,576	-		IAI47_13505	0.78	-1.7
2,865,576	-		IAI47_13505	0.78	-0.7
2,865,630	+		IAI47_13505	0.81	-1.8
2,865,630	+		IAI47_13505	0.81	-1.8
2,865,631	-		IAI47_13505	0.81	-1.1
2,865,631	-		IAI47_13505	0.81	+0.1
2,865,687	+		IAI47_13505	0.84	-2.4
2,865,706	+		IAI47_13505	0.85	+0.9
2,865,706	+		IAI47_13505	0.85	+1.8
2,865,706	+		IAI47_13505	0.85	-0.7
2,865,707	-		IAI47_13505	0.85	-2.0
2,865,707	-		IAI47_13505	0.85	-1.4
2,865,707	-		IAI47_13505	0.85	-0.9
2,865,707	-		IAI47_13505	0.85	+0.1
2,865,707	-		IAI47_13505	0.85	-0.5
2,865,710	+		IAI47_13505	0.85	-0.8
2,865,710	+		IAI47_13505	0.85	+0.1
2,865,710	+		IAI47_13505	0.85	+0.2
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