Strain Fitness in Pantoea sp. MT58 around IAI47_12150

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,572,460	+		IAI47_12140	0.83	-1.2
2,572,461	-		IAI47_12140	0.83	-0.6
2,572,494	+		IAI47_12140	0.87	-2.0
2,572,572	+				-0.4
2,572,573	-				+0.1
2,572,573	-				-0.7
2,572,582	+				-0.6
2,572,582	+				-0.2
2,572,583	-				-0.5
2,572,603	-				-0.3
2,572,712	+		IAI47_12145	0.13	+0.4
2,572,713	-		IAI47_12145	0.13	+0.7
2,572,713	-		IAI47_12145	0.13	-1.7
2,572,755	+		IAI47_12145	0.19	-0.1
2,572,756	-		IAI47_12145	0.19	-0.9
2,572,756	-		IAI47_12145	0.19	-0.5
2,572,766	+		IAI47_12145	0.20	-0.2
2,572,766	+		IAI47_12145	0.20	-0.7
2,572,766	+		IAI47_12145	0.20	-1.0
2,572,792	-		IAI47_12145	0.24	-1.9
2,572,827	-		IAI47_12145	0.28	-0.8
2,573,057	+		IAI47_12145	0.59	-0.4
2,573,058	-		IAI47_12145	0.59	-0.5
2,573,074	+		IAI47_12145	0.61	-1.0
2,573,075	-		IAI47_12145	0.61	-0.3
2,573,075	-		IAI47_12145	0.61	-0.7
2,573,075	-		IAI47_12145	0.61	-0.1
2,573,152	+		IAI47_12145	0.71	-1.2
2,573,152	+		IAI47_12145	0.71	+0.8
2,573,152	+		IAI47_12145	0.71	-2.6
2,573,153	-		IAI47_12145	0.71	-2.0
2,573,189	+		IAI47_12145	0.76	+2.5
2,573,207	+		IAI47_12145	0.78	-0.5
2,573,208	-		IAI47_12145	0.79	+0.5
2,573,279	+		IAI47_12145	0.88	-0.8
2,573,280	-		IAI47_12145	0.88	-0.6
2,573,280	-		IAI47_12145	0.88	-0.5
2,573,351	+				-1.3
2,573,351	+				-2.5
2,573,351	+				+0.3
2,573,352	-				+0.1
2,573,352	-				-1.3
2,573,352	-				+0.4
2,573,352	-				+0.6
2,573,352	-				-1.6
2,573,353	+				-1.3
2,573,353	+				+0.3
2,573,353	+				-1.6
2,573,353	+				-3.1
2,573,353	+				-1.6
2,573,353	+				-1.4
2,573,354	-				+0.3
2,573,354	-				-0.8
2,573,354	-				-0.6
2,573,354	-				-1.8
2,573,354	-				-1.6
2,573,354	-				-2.9
2,573,355	+				+0.0
2,573,355	+				-0.1
2,573,355	+				-1.5
2,573,355	+				-3.1
2,573,355	+				-2.0
2,573,356	-				-1.3
2,573,356	-				+0.8
2,573,356	-				-1.7
2,573,356	-				-1.2
2,573,369	+				+0.5
2,573,383	+				-0.1
2,573,391	+				-0.2
2,573,392	-				+0.3
2,573,396	+				-1.0
2,573,396	+				-1.6
2,573,396	+				-3.2
2,573,396	+				-1.2
2,573,397	-				-1.0
2,573,397	-				-1.2
2,573,397	-				-1.9
2,573,397	-				-1.1
2,573,401	+				-1.9
2,573,457	+				-1.3
2,573,457	+				+0.4
2,573,458	-				+0.0
2,573,458	-				-2.4
2,573,458	-				+0.1
2,573,458	-				-2.7
2,573,461	+				-0.6
2,573,461	+				-0.5
2,573,461	+				-3.6
2,573,462	-				-2.3
2,573,462	-				-1.1
2,573,462	-				-0.2
2,573,462	-				+0.1
2,573,494	+				-2.1
2,573,494	+				-0.7
2,573,494	+				-0.4
2,573,495	-				-1.9
2,573,495	-				-0.7
2,573,495	-				-0.6
2,573,557	+		IAI47_12150	0.13	-2.1
2,573,557	+		IAI47_12150	0.13	-0.2
2,573,624	+		IAI47_12150	0.19	+0.1
2,573,624	+		IAI47_12150	0.19	-2.5
2,573,625	-		IAI47_12150	0.19	-2.2
2,573,691	+		IAI47_12150	0.24	-0.2
2,573,692	-		IAI47_12150	0.24	-0.6
2,573,692	-		IAI47_12150	0.24	-0.6
2,573,716	+		IAI47_12150	0.26	+0.4
2,573,716	+		IAI47_12150	0.26	-1.7
2,573,716	+		IAI47_12150	0.26	+0.2
2,573,716	+		IAI47_12150	0.26	-1.6
2,573,717	-		IAI47_12150	0.26	-0.6
2,573,717	-		IAI47_12150	0.26	-0.6
2,573,719	+		IAI47_12150	0.26	-0.1
2,573,719	+		IAI47_12150	0.26	-1.6
2,573,719	+		IAI47_12150	0.26	-1.1
2,573,720	-		IAI47_12150	0.26	-1.3
2,573,727	+		IAI47_12150	0.27	-0.7
2,573,728	-		IAI47_12150	0.27	-0.7
2,573,728	-		IAI47_12150	0.27	-2.1
2,573,751	+		IAI47_12150	0.29	-1.3
2,573,751	+		IAI47_12150	0.29	-2.2
2,573,821	+		IAI47_12150	0.34	-0.2
2,573,821	+		IAI47_12150	0.34	-1.3
2,573,821	+		IAI47_12150	0.34	-0.0
2,573,821	+		IAI47_12150	0.34	-2.8
2,573,821	+		IAI47_12150	0.34	-0.3
2,573,821	+		IAI47_12150	0.34	-1.9
2,573,822	-		IAI47_12150	0.34	-2.5
2,573,822	-		IAI47_12150	0.34	-0.8
2,573,822	-		IAI47_12150	0.34	+1.1
2,573,822	-		IAI47_12150	0.34	-0.8
2,573,822	-		IAI47_12150	0.34	-1.1
2,573,822	-		IAI47_12150	0.34	-0.3
2,573,822	-		IAI47_12150	0.34	-2.1
2,573,822	-		IAI47_12150	0.34	-0.9
2,573,929	+		IAI47_12150	0.43	-1.3
2,573,929	+		IAI47_12150	0.43	+0.5
2,573,947	+		IAI47_12150	0.44	-0.6
2,573,947	+		IAI47_12150	0.44	-1.0
2,573,948	-		IAI47_12150	0.44	-0.3
2,573,948	-		IAI47_12150	0.44	-1.8
2,573,995	+		IAI47_12150	0.48	-0.1
2,574,051	+		IAI47_12150	0.53	-3.3
2,574,051	+		IAI47_12150	0.53	-1.2
2,574,051	+		IAI47_12150	0.53	-1.5
2,574,051	+		IAI47_12150	0.53	-0.4
2,574,051	+		IAI47_12150	0.53	+1.2
2,574,051	+		IAI47_12150	0.53	-2.3
2,574,051	+		IAI47_12150	0.53	-0.8
2,574,052	-		IAI47_12150	0.53	-1.8
2,574,052	-		IAI47_12150	0.53	-2.4
2,574,052	-		IAI47_12150	0.53	-2.5
2,574,052	-		IAI47_12150	0.53	-2.0
2,574,052	-		IAI47_12150	0.53	-0.3
2,574,074	-		IAI47_12150	0.54	-0.9
2,574,114	+		IAI47_12150	0.58	-0.0
2,574,114	+		IAI47_12150	0.58	-1.3
2,574,114	+		IAI47_12150	0.58	-1.9
2,574,114	+		IAI47_12150	0.58	+0.9
2,574,114	+		IAI47_12150	0.58	-1.3
2,574,114	+		IAI47_12150	0.58	+0.9
2,574,114	+		IAI47_12150	0.58	-1.1
2,574,115	-		IAI47_12150	0.58	-0.6
2,574,115	-		IAI47_12150	0.58	-0.3
2,574,115	-		IAI47_12150	0.58	+0.1
2,574,142	+		IAI47_12150	0.60	+0.7
2,574,142	+		IAI47_12150	0.60	-0.2
2,574,143	-		IAI47_12150	0.60	-1.7
2,574,143	-		IAI47_12150	0.60	+0.5
2,574,199	+		IAI47_12150	0.64	-3.5
2,574,199	+		IAI47_12150	0.64	-1.7
2,574,200	-		IAI47_12150	0.64	-0.8
2,574,226	+		IAI47_12150	0.67	+0.6
2,574,227	-		IAI47_12150	0.67	-0.1
2,574,233	-		IAI47_12150	0.67	+2.7
2,574,233	-		IAI47_12150	0.67	-1.5
2,574,233	-		IAI47_12150	0.67	-3.4
2,574,328	+		IAI47_12150	0.75	-0.9
2,574,328	+		IAI47_12150	0.75	-1.3
2,574,328	+		IAI47_12150	0.75	+0.7
2,574,329	-		IAI47_12150	0.75	+1.1
2,574,329	-		IAI47_12150	0.75	-1.9
2,574,366	+		IAI47_12150	0.78	-2.4
2,574,367	-		IAI47_12150	0.78	-1.3
2,574,367	-		IAI47_12150	0.78	-1.1
2,574,367	-		IAI47_12150	0.78	-1.1
2,574,395	-		IAI47_12150	0.80	-0.8
2,574,395	-		IAI47_12150	0.80	+1.6
2,574,395	-		IAI47_12150	0.80	+0.4
2,574,463	+		IAI47_12150	0.85	-1.4
2,574,476	+		IAI47_12150	0.86	+0.6
2,574,508	+		IAI47_12150	0.89	-1.1
2,574,508	+		IAI47_12150	0.89	-1.1
2,574,523	+				+0.1
2,574,550	+				-0.7
2,574,551	-				-0.6
2,574,571	+				-1.1
2,574,572	-				-1.8
2,574,572	-				-1.2
2,574,572	-				-1.5
2,574,583	+				-0.1
2,574,583	+				-1.9
2,574,601	+				-2.4
2,574,663	+				+0.7
2,574,663	+				+0.9
2,574,688	+				-1.6
2,574,688	+				-0.5
2,574,688	+				-0.5
2,574,689	-				-0.2
2,574,689	-				-1.2
2,574,689	-				-2.4
2,574,689	-				-1.5
2,574,689	-				-2.7
2,574,689	-				-3.6
2,574,750	+		IAI47_12155	0.11	-0.5
2,574,751	-		IAI47_12155	0.12	-0.8
2,574,751	-		IAI47_12155	0.12	-1.9
2,574,767	+		IAI47_12155	0.14	-1.0
2,574,767	+		IAI47_12155	0.14	-1.2
2,574,768	-		IAI47_12155	0.14	+0.1
2,574,768	-		IAI47_12155	0.14	-3.0
2,574,773	+		IAI47_12155	0.15	-1.2
2,574,773	+		IAI47_12155	0.15	-2.1
2,574,773	+		IAI47_12155	0.15	-1.1
2,574,774	-		IAI47_12155	0.15	-0.7
2,574,774	-		IAI47_12155	0.15	-0.9
2,574,774	-		IAI47_12155	0.15	+0.7
2,574,777	+		IAI47_12155	0.15	-1.1
2,574,777	+		IAI47_12155	0.15	-1.6
2,574,778	-		IAI47_12155	0.16	+0.5
2,574,778	-		IAI47_12155	0.16	+0.0
2,574,778	-		IAI47_12155	0.16	-1.7
2,574,833	+		IAI47_12155	0.24	-0.1
2,574,833	+		IAI47_12155	0.24	-0.5
2,574,833	+		IAI47_12155	0.24	-1.2
2,574,834	-		IAI47_12155	0.24	-2.1
2,574,837	+		IAI47_12155	0.24	-2.0
2,574,837	+		IAI47_12155	0.24	-0.4
2,574,837	+		IAI47_12155	0.24	-2.3
2,574,837	+		IAI47_12155	0.24	-0.2
2,574,837	+		IAI47_12155	0.24	+0.2
2,574,838	-		IAI47_12155	0.24	-0.4
2,574,838	-		IAI47_12155	0.24	+0.9
2,574,838	-		IAI47_12155	0.24	-2.4
2,574,838	-		IAI47_12155	0.24	-0.6
2,574,932	-		IAI47_12155	0.38	-0.6
2,574,951	+		IAI47_12155	0.41	+0.1
2,574,952	-		IAI47_12155	0.41	-2.5
2,574,952	-		IAI47_12155	0.41	-1.4
2,574,952	-		IAI47_12155	0.41	-1.2
2,575,048	+		IAI47_12155	0.56	-1.4
2,575,152	+		IAI47_12155	0.71	-1.9
2,575,153	-		IAI47_12155	0.71	+0.7
2,575,188	+		IAI47_12155	0.76	-1.4
2,575,188	+		IAI47_12155	0.76	-1.1
2,575,189	-		IAI47_12155	0.76	-2.8
2,575,194	+		IAI47_12155	0.77	-0.6
2,575,195	-		IAI47_12155	0.77	-0.4
2,575,195	-		IAI47_12155	0.77	-2.5
2,575,203	+		IAI47_12155	0.79	-2.2
2,575,203	+		IAI47_12155	0.79	-0.7
2,575,204	-		IAI47_12155	0.79	-0.9
2,575,204	-		IAI47_12155	0.79	+0.5
2,575,204	-		IAI47_12155	0.79	-2.0
2,575,204	-		IAI47_12155	0.79	-0.8
2,575,219	+		IAI47_12155	0.81	-0.6
2,575,220	-		IAI47_12155	0.81	-0.5
2,575,220	-		IAI47_12155	0.81	-0.1
2,575,290	+				-0.7
2,575,290	+				+0.3
2,575,290	+				+0.1
2,575,291	-				-0.1
2,575,299	+				-0.5
2,575,299	+				-1.9
2,575,299	+				+0.4
2,575,299	+				-1.6
2,575,299	+				+0.3
2,575,300	-				+0.5
2,575,300	-				-1.9
2,575,300	-				-0.5
2,575,348	-				-1.2
2,575,348	-				-1.9
2,575,348	-				-0.8
2,575,430	+		IAI47_12160	0.17	-1.3
2,575,430	+		IAI47_12160	0.17	-1.2
2,575,431	-		IAI47_12160	0.18	-0.5
2,575,431	-		IAI47_12160	0.18	-3.1
2,575,496	+		IAI47_12160	0.34	+0.1
2,575,497	-		IAI47_12160	0.34	-0.3
2,575,532	+		IAI47_12160	0.42	-1.3
2,575,533	-		IAI47_12160	0.43	-1.3
2,575,533	-		IAI47_12160	0.43	-1.7
2,575,632	+		IAI47_12160	0.67	-0.3
2,575,632	+		IAI47_12160	0.67	+0.3
2,575,633	-		IAI47_12160	0.67	-1.6
2,575,633	-		IAI47_12160	0.67	-3.1
2,575,640	+		IAI47_12160	0.69	-1.8
2,575,640	+		IAI47_12160	0.69	-1.5
2,575,640	+		IAI47_12160	0.69	-0.1
2,575,640	+		IAI47_12160	0.69	-1.5
2,575,640	+		IAI47_12160	0.69	-0.7
2,575,640	+		IAI47_12160	0.69	+0.3
2,575,640	+		IAI47_12160	0.69	-0.8
2,575,641	-		IAI47_12160	0.69	-2.3
2,575,641	-		IAI47_12160	0.69	+0.4
2,575,641	-		IAI47_12160	0.69	-1.5
2,575,641	-		IAI47_12160	0.69	+0.8
2,575,641	-		IAI47_12160	0.69	-2.1
2,575,641	-		IAI47_12160	0.69	-0.9
2,575,641	-		IAI47_12160	0.69	-0.9
2,575,641	-		IAI47_12160	0.69	-0.2
2,575,641	-		IAI47_12160	0.69	-0.4