Strain Fitness in Pantoea sp. MT58 around IAI47_10740

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,270,720	+		IAI47_10735	0.57	-0.2
2,270,721	-		IAI47_10735	0.57	-2.3
2,270,763	-		IAI47_10735	0.59	-1.4
2,270,778	+		IAI47_10735	0.60	+2.6
2,270,906	-		IAI47_10735	0.66	-0.8
2,270,935	+		IAI47_10735	0.68	+0.5
2,270,936	-		IAI47_10735	0.68	-0.9
2,270,936	-		IAI47_10735	0.68	+2.6
2,270,996	+		IAI47_10735	0.71	+0.4
2,270,996	+		IAI47_10735	0.71	+1.9
2,270,996	+		IAI47_10735	0.71	+0.3
2,270,996	+		IAI47_10735	0.71	-1.6
2,270,996	+		IAI47_10735	0.71	+5.4
2,271,039	+		IAI47_10735	0.73	+0.1
2,271,039	+		IAI47_10735	0.73	-0.7
2,271,040	-		IAI47_10735	0.73	+0.5
2,271,059	+		IAI47_10735	0.74	+0.3
2,271,301	+		IAI47_10735	0.86	-0.9
2,271,302	-		IAI47_10735	0.86	-0.1
2,271,302	-		IAI47_10735	0.86	+1.9
2,271,302	-		IAI47_10735	0.86	-0.3
2,271,302	-		IAI47_10735	0.86	+0.2
2,271,307	+		IAI47_10735	0.86	-0.6
2,271,308	-		IAI47_10735	0.86	+0.2
2,271,323	+		IAI47_10735	0.87	+1.2
2,271,323	+		IAI47_10735	0.87	-0.1
2,271,323	+		IAI47_10735	0.87	-0.4
2,271,323	+		IAI47_10735	0.87	-1.7
2,271,323	+		IAI47_10735	0.87	+0.4
2,271,323	+		IAI47_10735	0.87	+0.6
2,271,323	+		IAI47_10735	0.87	+0.2
2,271,323	+		IAI47_10735	0.87	-0.4
2,271,323	+		IAI47_10735	0.87	-0.6
2,271,323	+		IAI47_10735	0.87	+1.9
2,271,323	+		IAI47_10735	0.87	+1.8
2,271,324	-		IAI47_10735	0.87	-0.6
2,271,324	-		IAI47_10735	0.87	+0.4
2,271,324	-		IAI47_10735	0.87	-0.8
2,271,324	-		IAI47_10735	0.87	+2.0
2,271,324	-		IAI47_10735	0.87	-1.1
2,271,324	-		IAI47_10735	0.87	+0.3
2,271,324	-		IAI47_10735	0.87	+1.0
2,271,324	-		IAI47_10735	0.87	+0.8
2,271,324	-		IAI47_10735	0.87	-0.9
2,271,324	-		IAI47_10735	0.87	+0.4
2,271,324	-		IAI47_10735	0.87	+0.4
2,271,383	+				+1.0
2,271,454	+				+0.0
2,271,455	-				+0.3
2,271,455	-				+0.6
2,271,455	-				-0.2
2,271,455	-				-0.2
2,271,473	+				+0.1
2,271,473	+				+0.7
2,271,473	+				-0.2
2,271,474	-				+1.3
2,271,474	-				-2.8
2,271,474	-				+0.4
2,271,474	-				+0.4
2,271,474	-				-0.7
2,271,474	-				-0.7
2,271,474	-				+1.8
2,271,474	-				+1.3
2,271,484	+				-0.2
2,271,485	-				+1.9
2,271,485	-				-0.3
2,271,527	+				+1.7
2,271,527	+				+0.4
2,271,527	+				+0.6
2,271,527	+				+1.4
2,271,527	+				-0.5
2,271,528	-				+1.2
2,271,528	-				-0.6
2,271,528	-				-0.1
2,271,528	-				+0.3
2,271,583	+				-0.3
2,271,592	+				+1.0
2,271,592	+				-2.0
2,271,592	+				+1.0
2,271,592	+				-0.7
2,271,593	-				+0.3
2,271,593	-				-0.6
2,271,593	-				-0.3
2,271,593	-				+0.1
2,271,662	+		IAI47_10740	0.17	-0.7
2,271,743	+		IAI47_10740	0.34	+0.5
2,271,793	+		IAI47_10740	0.45	+0.7
2,271,793	+		IAI47_10740	0.45	+0.6
2,271,793	+		IAI47_10740	0.45	-1.0
2,271,793	+		IAI47_10740	0.45	-1.4
2,271,793	+		IAI47_10740	0.45	-2.0
2,271,794	-		IAI47_10740	0.45	-1.8
2,271,794	-		IAI47_10740	0.45	-1.2
2,271,794	-		IAI47_10740	0.45	-0.6
2,271,794	-		IAI47_10740	0.45	-0.2
2,271,794	-		IAI47_10740	0.45	-0.4
2,271,794	-		IAI47_10740	0.45	-2.6
2,271,794	-		IAI47_10740	0.45	+0.5
2,271,804	-		IAI47_10740	0.47	+1.0
2,271,867	-		IAI47_10740	0.61	+0.6
2,271,867	-		IAI47_10740	0.61	+0.2
2,271,938	+		IAI47_10740	0.76	-0.4
2,271,939	-		IAI47_10740	0.76	-0.9
2,271,939	-		IAI47_10740	0.76	-1.3
2,271,939	-		IAI47_10740	0.76	+1.1
2,271,986	+		IAI47_10740	0.86	+0.1
2,271,986	+		IAI47_10740	0.86	+1.9
2,271,986	+		IAI47_10740	0.86	+1.4
2,271,987	-		IAI47_10740	0.87	+2.3
2,271,987	-		IAI47_10740	0.87	-1.7
2,271,999	-		IAI47_10740	0.89	+1.4
2,272,023	+				-0.9
2,272,023	+				-0.2
2,272,023	+				-0.4
2,272,023	+				+0.6
2,272,023	+				+0.7
2,272,023	+				+0.3
2,272,023	+				-0.3
2,272,024	-				-0.5
2,272,024	-				+1.9
2,272,024	-				+0.3
2,272,024	-				+1.6
2,272,024	-				-0.4
2,272,024	-				+0.0
2,272,029	+				-1.7
2,272,029	+				-1.5
2,272,029	+				+1.0
2,272,030	-				+0.1
2,272,030	-				-1.4
2,272,030	-				+1.3
2,272,030	-				-0.9
2,272,098	-				-1.6
2,272,098	-				+0.4
2,272,120	+				+0.3
2,272,120	+				+1.3
2,272,120	+				-0.7
2,272,120	+				+0.7
2,272,121	-				+1.0
2,272,121	-				+0.7
2,272,121	-				+0.5
2,272,121	-				+1.3
2,272,162	+				-0.7
2,272,163	-				+0.6
2,272,163	-				-0.0
2,272,186	+				-0.2
2,272,187	-				+0.7
2,272,199	+				-0.2
2,272,228	-				+0.8
2,272,288	-		IAI47_10745	0.21	+0.3
2,272,322	+		IAI47_10745	0.27	-1.3
2,272,349	+		IAI47_10745	0.33	+1.2
2,272,349	+		IAI47_10745	0.33	+0.3
2,272,350	-		IAI47_10745	0.33	+5.4
2,272,385	+		IAI47_10745	0.39	+0.7
2,272,386	-		IAI47_10745	0.40	+1.2
2,272,488	+		IAI47_10745	0.59	-1.9
2,272,488	+		IAI47_10745	0.59	-2.9
2,272,489	-		IAI47_10745	0.60	+0.6
2,272,489	-		IAI47_10745	0.60	+0.8
2,272,556	+		IAI47_10745	0.72	-0.9
2,272,556	+		IAI47_10745	0.72	+0.2
2,272,556	+		IAI47_10745	0.72	+0.7
2,272,556	+		IAI47_10745	0.72	+0.8
2,272,556	+		IAI47_10745	0.72	+0.2
2,272,557	-		IAI47_10745	0.73	-0.5
2,272,557	-		IAI47_10745	0.73	-1.1
2,272,557	-		IAI47_10745	0.73	+0.0
2,272,557	-		IAI47_10745	0.73	-0.7
2,272,557	-		IAI47_10745	0.73	+1.6
2,272,557	-		IAI47_10745	0.73	-0.6
2,272,611	+		IAI47_10745	0.83	+0.2
2,272,612	-		IAI47_10745	0.83	-0.2
2,272,730	+				-1.1
2,272,730	+				+0.1
2,272,731	-				-1.6
2,272,731	-				-0.3
2,272,731	-				-0.1
2,272,751	+				+0.6
2,272,751	+				+0.8
2,272,777	+				+1.6
2,272,813	-				-0.3
2,272,887	+		IAI47_10750	0.12	+0.6
2,272,888	-		IAI47_10750	0.12	-0.7
2,272,930	+		IAI47_10750	0.16	-0.1
2,272,930	+		IAI47_10750	0.16	-0.7
2,272,931	-		IAI47_10750	0.16	-0.0
2,272,938	+		IAI47_10750	0.17	-0.9
2,272,940	+		IAI47_10750	0.18	-0.4
2,272,941	-		IAI47_10750	0.18	+1.5
2,273,012	+		IAI47_10750	0.26	+0.8