Strain Fitness in Pantoea sp. MT58 around IAI47_10195

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,153,664	-		IAI47_10190	0.45	-0.1
2,153,682	+		IAI47_10190	0.47	-0.9
2,153,706	+		IAI47_10190	0.50	+0.2
2,153,706	+		IAI47_10190	0.50	+1.6
2,153,750	+		IAI47_10190	0.54	-1.1
2,153,751	-		IAI47_10190	0.54	+2.5
2,153,773	-		IAI47_10190	0.56	-1.3
2,153,810	-		IAI47_10190	0.60	+0.5
2,153,844	-		IAI47_10190	0.64	+1.1
2,153,923	-		IAI47_10190	0.72	-0.1
2,153,923	-		IAI47_10190	0.72	+0.6
2,153,923	-		IAI47_10190	0.72	+2.0
2,153,925	+		IAI47_10190	0.72	+0.0
2,153,925	+		IAI47_10190	0.72	-0.8
2,153,925	+		IAI47_10190	0.72	+0.8
2,153,925	+		IAI47_10190	0.72	+0.1
2,153,926	-		IAI47_10190	0.72	-0.3
2,153,926	-		IAI47_10190	0.72	-0.4
2,153,926	-		IAI47_10190	0.72	+2.5
2,153,933	+		IAI47_10190	0.73	-0.7
2,153,933	+		IAI47_10190	0.73	+2.7
2,153,933	+		IAI47_10190	0.73	+1.8
2,153,934	-		IAI47_10190	0.73	+1.1
2,153,934	-		IAI47_10190	0.73	-1.7
2,153,934	-		IAI47_10190	0.73	+0.8
2,153,961	+		IAI47_10190	0.76	+1.0
2,153,961	+		IAI47_10190	0.76	-0.8
2,153,962	-		IAI47_10190	0.76	+2.5
2,153,969	-		IAI47_10190	0.76	-0.5
2,153,969	-		IAI47_10190	0.76	+0.6
2,153,969	-		IAI47_10190	0.76	-0.5
2,154,060	-		IAI47_10190	0.86	+1.4
2,154,071	+		IAI47_10190	0.87	-1.4
2,154,071	+		IAI47_10190	0.87	+0.3
2,154,071	+		IAI47_10190	0.87	+0.5
2,154,072	-		IAI47_10190	0.87	+0.6
2,154,072	-		IAI47_10190	0.87	+0.6
2,154,072	-		IAI47_10190	0.87	-2.0
2,154,105	+				+1.1
2,154,106	-				+0.6
2,154,135	+				+0.5
2,154,135	+				+0.1
2,154,153	-				-1.0
2,154,153	-				+1.1
2,154,157	-				-0.0
2,154,259	+				-0.9
2,154,259	+				-0.8
2,154,260	-				+0.6
2,154,319	+				-0.6
2,154,334	-				-0.8
2,154,355	-				-1.9
2,154,364	+				+2.2
2,154,386	+				+0.4
2,154,401	+				+1.9
2,154,401	+				+0.6
2,154,402	-				+1.9
2,154,402	-				+0.9
2,154,435	+				-1.0
2,154,455	+				-0.1
2,154,455	+				-0.1
2,154,456	-				+0.2
2,154,456	-				+0.3
2,154,522	+				-0.2
2,154,522	+				-0.3
2,154,523	-				-1.0
2,154,528	-				-0.2
2,154,576	+				-1.1
2,154,646	+				-2.0
2,154,647	-				+1.1
2,154,665	+				-1.5
2,154,706	+		IAI47_10195	0.10	-1.9
2,154,706	+		IAI47_10195	0.10	-1.5
2,154,706	+		IAI47_10195	0.10	-0.5
2,154,706	+		IAI47_10195	0.10	-3.1
2,154,706	+		IAI47_10195	0.10	-1.2
2,154,706	+		IAI47_10195	0.10	-1.1
2,154,707	-		IAI47_10195	0.11	-0.7
2,154,707	-		IAI47_10195	0.11	+0.2
2,154,707	-		IAI47_10195	0.11	-2.0
2,154,707	-		IAI47_10195	0.11	+2.2
2,154,707	-		IAI47_10195	0.11	+0.0
2,154,707	-		IAI47_10195	0.11	+1.2
2,154,707	-		IAI47_10195	0.11	-0.6
2,154,818	+		IAI47_10195	0.30	-2.4
2,154,827	+		IAI47_10195	0.31	-1.8
2,154,827	+		IAI47_10195	0.31	-0.6
2,154,827	+		IAI47_10195	0.31	-0.3
2,154,827	+		IAI47_10195	0.31	+0.5
2,154,827	+		IAI47_10195	0.31	-0.5
2,154,827	+		IAI47_10195	0.31	+0.1
2,154,828	-		IAI47_10195	0.31	-2.4
2,154,828	-		IAI47_10195	0.31	+0.6
2,154,851	+		IAI47_10195	0.35	-0.6
2,154,852	-		IAI47_10195	0.35	-0.0
2,154,919	+		IAI47_10195	0.47	+1.2
2,154,937	+		IAI47_10195	0.50	-2.7
2,155,005	+		IAI47_10195	0.62	+1.1
2,155,005	+		IAI47_10195	0.62	+2.0
2,155,005	+		IAI47_10195	0.62	-0.4
2,155,005	+		IAI47_10195	0.62	-0.2
2,155,038	-		IAI47_10195	0.67	+1.1
2,155,038	-		IAI47_10195	0.67	+0.4
2,155,038	-		IAI47_10195	0.67	+3.4
2,155,038	-		IAI47_10195	0.67	+0.6
2,155,080	-		IAI47_10195	0.74	+0.9
2,155,124	+		IAI47_10195	0.82	+0.9
2,155,124	+		IAI47_10195	0.82	-0.4
2,155,124	+		IAI47_10195	0.82	+0.3
2,155,124	+		IAI47_10195	0.82	+0.4
2,155,124	+		IAI47_10195	0.82	-1.4
2,155,124	+		IAI47_10195	0.82	+0.2
2,155,125	-		IAI47_10195	0.82	+0.3
2,155,125	-		IAI47_10195	0.82	-1.8
2,155,125	-		IAI47_10195	0.82	+0.3
2,155,125	-		IAI47_10195	0.82	+0.7
2,155,125	-		IAI47_10195	0.82	+0.4
2,155,125	-		IAI47_10195	0.82	+1.4
2,155,125	-		IAI47_10195	0.82	-0.5
2,155,125	-		IAI47_10195	0.82	+1.5
2,155,125	-		IAI47_10195	0.82	-0.7
2,155,144	+		IAI47_10195	0.85	+0.4
2,155,144	+		IAI47_10195	0.85	+0.2
2,155,144	+		IAI47_10195	0.85	-0.1
2,155,144	+		IAI47_10195	0.85	+1.1
2,155,177	+				+0.8
2,155,195	-				-1.1
2,155,211	+				+2.9
2,155,211	+				-2.3
2,155,241	+				-0.7
2,155,285	+				+0.9
2,155,334	+				-1.8
2,155,335	-				-2.4
2,155,335	-				-0.4
2,155,335	-				-0.4
2,155,335	-				-0.6
2,155,337	-				+1.3
2,155,347	-				+0.0
2,155,349	-				+3.0
2,155,444	+				-1.1
2,155,444	+				-1.0
2,155,444	+				+3.1
2,155,445	-				+2.1
2,155,445	-				-0.2
2,155,445	-				-0.2
2,155,486	+				+0.2
2,155,596	-		IAI47_10200	0.11	-0.4
2,155,646	-		IAI47_10200	0.13	-2.2
2,155,671	+		IAI47_10200	0.14	+0.8
2,155,671	+		IAI47_10200	0.14	+1.2
2,155,672	-		IAI47_10200	0.14	+0.4
2,155,672	-		IAI47_10200	0.14	-0.2
2,155,674	-		IAI47_10200	0.14	-0.3
2,155,674	-		IAI47_10200	0.14	+0.9
2,155,674	-		IAI47_10200	0.14	+1.9
2,155,674	-		IAI47_10200	0.14	+0.1
2,155,674	-		IAI47_10200	0.14	-0.3
2,155,691	+		IAI47_10200	0.15	+0.2
2,155,691	+		IAI47_10200	0.15	+1.2
2,155,691	+		IAI47_10200	0.15	+1.9
2,155,691	+		IAI47_10200	0.15	+1.0
2,155,691	+		IAI47_10200	0.15	-2.4
2,155,691	+		IAI47_10200	0.15	+1.3
2,155,691	+		IAI47_10200	0.15	+0.5
2,155,691	+		IAI47_10200	0.15	+0.9
2,155,692	-		IAI47_10200	0.15	+0.3
2,155,692	-		IAI47_10200	0.15	-0.0
2,155,692	-		IAI47_10200	0.15	+1.0
2,155,696	+		IAI47_10200	0.15	+0.4
2,155,696	+		IAI47_10200	0.15	-0.5
2,155,696	+		IAI47_10200	0.15	+1.3
2,155,697	-		IAI47_10200	0.15	-0.4
2,155,697	-		IAI47_10200	0.15	-0.5
2,155,698	+		IAI47_10200	0.16	+0.9
2,155,698	+		IAI47_10200	0.16	+0.2
2,155,698	+		IAI47_10200	0.16	-1.6
2,155,698	+		IAI47_10200	0.16	+2.4
2,155,698	+		IAI47_10200	0.16	+0.6
2,155,698	+		IAI47_10200	0.16	+0.3
2,155,698	+		IAI47_10200	0.16	+2.3
2,155,699	-		IAI47_10200	0.16	+2.5
2,155,739	+		IAI47_10200	0.17	-1.2
2,155,739	+		IAI47_10200	0.17	-0.7
2,155,759	+		IAI47_10200	0.18	+0.6
2,155,760	-		IAI47_10200	0.18	+0.5
2,155,760	-		IAI47_10200	0.18	-0.4
2,155,794	+		IAI47_10200	0.20	-1.0
2,155,795	-		IAI47_10200	0.20	-1.0
2,155,795	-		IAI47_10200	0.20	-0.7
2,155,818	+		IAI47_10200	0.21	+0.3
2,155,818	+		IAI47_10200	0.21	-0.2
2,155,860	+		IAI47_10200	0.23	+0.2
2,155,860	+		IAI47_10200	0.23	+2.1
2,155,861	-		IAI47_10200	0.23	-0.5
2,155,951	-		IAI47_10200	0.27	-1.1
2,155,951	-		IAI47_10200	0.27	+0.2
2,156,149	+		IAI47_10200	0.35	+1.0
2,156,149	+		IAI47_10200	0.35	-2.1
2,156,150	-		IAI47_10200	0.35	-1.8
2,156,150	-		IAI47_10200	0.35	+0.7
2,156,150	-		IAI47_10200	0.35	-0.3
2,156,150	-		IAI47_10200	0.35	-0.4
2,156,158	+		IAI47_10200	0.36	-0.4
2,156,159	-		IAI47_10200	0.36	+0.0
2,156,159	-		IAI47_10200	0.36	+0.9
2,156,159	-		IAI47_10200	0.36	+1.5