Strain Fitness in Pantoea sp. MT58 around IAI47_07130

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,503,427	+		IAI47_07125	0.58	+0.8
1,503,428	-		IAI47_07125	0.58	+0.3
1,503,428	-		IAI47_07125	0.58	+0.2
1,503,453	+		IAI47_07125	0.60	+0.2
1,503,453	+		IAI47_07125	0.60	+0.4
1,503,453	+		IAI47_07125	0.60	+0.1
1,503,453	+		IAI47_07125	0.60	+1.8
1,503,454	-		IAI47_07125	0.60	-0.3
1,503,454	-		IAI47_07125	0.60	-0.2
1,503,454	-		IAI47_07125	0.60	-0.2
1,503,454	-		IAI47_07125	0.60	-0.1
1,503,582	+		IAI47_07125	0.69	+0.9
1,503,582	+		IAI47_07125	0.69	+0.3
1,503,583	-		IAI47_07125	0.69	-0.2
1,503,583	-		IAI47_07125	0.69	-0.2
1,503,583	-		IAI47_07125	0.69	-0.2
1,503,619	+		IAI47_07125	0.72	-1.8
1,503,619	+		IAI47_07125	0.72	-0.2
1,503,619	+		IAI47_07125	0.72	+0.1
1,503,619	+		IAI47_07125	0.72	-0.1
1,503,619	+		IAI47_07125	0.72	+0.4
1,503,619	+		IAI47_07125	0.72	-0.1
1,503,620	-		IAI47_07125	0.72	+0.4
1,503,620	-		IAI47_07125	0.72	+2.8
1,503,620	-		IAI47_07125	0.72	-0.2
1,503,620	-		IAI47_07125	0.72	+1.2
1,503,620	-		IAI47_07125	0.72	+1.4
1,503,620	-		IAI47_07125	0.72	+0.7
1,503,620	-		IAI47_07125	0.72	+0.5
1,503,620	-		IAI47_07125	0.72	+1.2
1,503,620	-		IAI47_07125	0.72	+2.1
1,503,620	-		IAI47_07125	0.72	-0.9
1,503,620	-		IAI47_07125	0.72	-0.5
1,503,620	-		IAI47_07125	0.72	+0.4
1,503,687	+		IAI47_07125	0.76	+0.8
1,503,694	-		IAI47_07125	0.77	-1.4
1,503,694	-		IAI47_07125	0.77	+2.0
1,503,694	-		IAI47_07125	0.77	-0.3
1,503,694	-		IAI47_07125	0.77	+1.8
1,503,732	+		IAI47_07125	0.80	+0.3
1,503,739	+		IAI47_07125	0.80	-0.2
1,503,739	+		IAI47_07125	0.80	-0.7
1,503,739	+		IAI47_07125	0.80	-0.4
1,503,739	+		IAI47_07125	0.80	+2.1
1,503,740	-		IAI47_07125	0.80	+2.2
1,503,740	-		IAI47_07125	0.80	-0.6
1,503,786	+		IAI47_07125	0.83	-0.8
1,503,787	-		IAI47_07125	0.84	-1.7
1,503,875	-		IAI47_07125	0.90	+0.9
1,503,875	-		IAI47_07125	0.90	+1.5
1,503,892	+				-1.2
1,503,892	+				+0.8
1,503,892	+				+0.4
1,503,892	+				+1.2
1,503,893	-				+1.7
1,503,893	-				-0.1
1,503,909	-				+0.3
1,503,981	+				-1.1
1,503,981	+				-0.5
1,503,981	+				+1.4
1,503,982	-				-1.3
1,503,982	-				+1.9
1,503,982	-				+0.7
1,503,982	-				-0.7
1,503,982	-				+1.3
1,503,982	-				-1.3
1,503,988	-				+1.1
1,504,060	+				-1.5
1,504,060	+				+1.3
1,504,060	+				-0.2
1,504,060	+				-0.3
1,504,061	-				+0.0
1,504,061	-				+1.0
1,504,061	-				-0.5
1,504,080	+				-0.9
1,504,081	-				-0.0
1,504,081	-				+0.9
1,504,106	+				-0.9
1,504,106	+				+0.1
1,504,106	+				+1.0
1,504,107	-				+0.0
1,504,174	+				+0.5
1,504,177	+				-0.4
1,504,177	+				-2.3
1,504,178	-				+0.9
1,504,196	+				-0.1
1,504,197	-				-2.0
1,504,197	-				-0.7
1,504,226	+				-0.6
1,504,226	+				+2.2
1,504,226	+				-0.6
1,504,226	+				-2.0
1,504,226	+				-0.8
1,504,226	+				-1.6
1,504,226	+				+0.9
1,504,226	+				+0.5
1,504,227	-				+2.2
1,504,227	-				+0.4
1,504,227	-				+0.4
1,504,227	-				+0.8
1,504,227	-				+0.4
1,504,227	-				-2.1
1,504,227	-				+1.7
1,504,227	-				-1.5
1,504,227	-				+1.0
1,504,245	+				-0.5
1,504,246	-				-1.3
1,504,246	-				+1.2
1,504,264	+				+0.8
1,504,265	-				-0.4
1,504,265	-				+1.0
1,504,268	+				-0.2
1,504,283	+				+0.3
1,504,283	+				+0.4
1,504,283	+				+0.7
1,504,307	-				+0.7
1,504,325	+				-0.1
1,504,325	+				-1.2
1,504,326	-				+1.4
1,504,365	+				-0.3
1,504,433	+				+0.6
1,504,433	+				-1.6
1,504,434	-				-1.2
1,504,434	-				-1.5
1,504,436	+				-0.9
1,504,436	+				+1.8
1,504,437	-				+0.5
1,504,484	-				-0.1
1,504,507	+				-0.5
1,504,507	+				+1.8
1,504,512	+				+0.3
1,504,512	+				-1.7
1,504,512	+				+0.9
1,504,512	+				-0.8
1,504,512	+				+1.8
1,504,512	+				-0.9
1,504,512	+				+0.4
1,504,512	+				+0.7
1,504,513	-				+0.2
1,504,513	-				+1.4
1,504,513	-				+0.1
1,504,513	-				+2.8
1,504,513	-				+0.4
1,504,523	+				-0.7
1,504,523	+				+1.3
1,504,524	-				-1.2
1,504,524	-				+1.2
1,504,524	-				-2.5
1,504,524	-				+1.8
1,504,524	-				-1.8
1,504,524	-				-2.7
1,504,538	+				+0.8
1,504,538	+				+0.5
1,504,538	+				+2.1
1,504,587	+		IAI47_07130	0.12	-0.8
1,504,588	-		IAI47_07130	0.12	-0.4
1,504,588	-		IAI47_07130	0.12	+1.6
1,504,588	-		IAI47_07130	0.12	+0.1
1,504,629	+		IAI47_07130	0.15	+0.8
1,504,629	+		IAI47_07130	0.15	+0.8
1,504,634	+		IAI47_07130	0.15	+2.3
1,504,635	-		IAI47_07130	0.15	+1.7
1,504,671	+		IAI47_07130	0.18	-1.6
1,504,671	+		IAI47_07130	0.18	-0.4
1,504,671	+		IAI47_07130	0.18	-1.6
1,504,671	+		IAI47_07130	0.18	-0.3
1,504,672	-		IAI47_07130	0.18	+0.4
1,504,673	+		IAI47_07130	0.18	+1.6
1,504,673	+		IAI47_07130	0.18	+1.7
1,504,673	+		IAI47_07130	0.18	+0.3
1,504,673	+		IAI47_07130	0.18	-0.2
1,504,673	+		IAI47_07130	0.18	+0.7
1,504,673	+		IAI47_07130	0.18	+0.5
1,504,673	+		IAI47_07130	0.18	-0.0
1,504,673	+		IAI47_07130	0.18	+2.2
1,504,673	+		IAI47_07130	0.18	-0.6
1,504,673	+		IAI47_07130	0.18	+0.5
1,504,674	-		IAI47_07130	0.18	+0.7
1,504,674	-		IAI47_07130	0.18	-1.1
1,504,674	-		IAI47_07130	0.18	-0.4
1,504,674	-		IAI47_07130	0.18	+0.5
1,504,674	-		IAI47_07130	0.18	+0.8
1,504,674	-		IAI47_07130	0.18	+1.8
1,504,674	-		IAI47_07130	0.18	-0.1
1,504,674	-		IAI47_07130	0.18	+1.1
1,504,674	-		IAI47_07130	0.18	-1.6
1,504,674	-		IAI47_07130	0.18	+2.1
1,504,674	-		IAI47_07130	0.18	-0.7
1,504,674	-		IAI47_07130	0.18	-0.1
1,504,674	-		IAI47_07130	0.18	+1.4
1,504,677	+		IAI47_07130	0.19	-1.2
1,504,677	+		IAI47_07130	0.19	+1.1
1,504,677	+		IAI47_07130	0.19	+1.4
1,504,678	-		IAI47_07130	0.19	-0.8
1,504,678	-		IAI47_07130	0.19	+1.8
1,504,678	-		IAI47_07130	0.19	-0.2
1,504,678	-		IAI47_07130	0.19	+2.5
1,504,678	-		IAI47_07130	0.19	+1.2
1,504,678	-		IAI47_07130	0.19	+2.1
1,504,712	+		IAI47_07130	0.21	+0.8
1,504,713	-		IAI47_07130	0.21	-0.2
1,504,713	-		IAI47_07130	0.21	-0.8
1,504,713	-		IAI47_07130	0.21	+0.9
1,504,713	-		IAI47_07130	0.21	+0.8
1,504,740	+		IAI47_07130	0.23	-2.1
1,504,741	-		IAI47_07130	0.23	-1.8
1,504,775	+		IAI47_07130	0.26	-0.1
1,504,782	+		IAI47_07130	0.26	-0.1
1,504,856	+		IAI47_07130	0.32	+1.1
1,504,856	+		IAI47_07130	0.32	+0.2
1,504,856	+		IAI47_07130	0.32	+0.9
1,504,950	+		IAI47_07130	0.39	+1.1
1,504,950	+		IAI47_07130	0.39	+0.8
1,504,950	+		IAI47_07130	0.39	-0.1
1,504,950	+		IAI47_07130	0.39	+1.4
1,504,950	+		IAI47_07130	0.39	+0.4
1,504,950	+		IAI47_07130	0.39	-0.7
1,504,950	+		IAI47_07130	0.39	+2.1
1,504,951	-		IAI47_07130	0.39	-0.8
1,504,951	-		IAI47_07130	0.39	+0.4
1,504,951	-		IAI47_07130	0.39	-1.6
1,504,951	-		IAI47_07130	0.39	+1.4
1,504,987	+		IAI47_07130	0.41	-0.1
1,505,050	+		IAI47_07130	0.46	+1.5
1,505,050	+		IAI47_07130	0.46	-1.4
1,505,050	+		IAI47_07130	0.46	+1.0
1,505,171	+		IAI47_07130	0.55	+0.4
1,505,172	-		IAI47_07130	0.55	+0.4
1,505,185	-		IAI47_07130	0.56	+1.4
1,505,185	-		IAI47_07130	0.56	+1.3
1,505,200	-		IAI47_07130	0.57	+0.1
1,505,361	+		IAI47_07130	0.69	+0.6
1,505,361	+		IAI47_07130	0.69	-0.4
1,505,361	+		IAI47_07130	0.69	+1.9
1,505,361	+		IAI47_07130	0.69	+1.9
1,505,361	+		IAI47_07130	0.69	+1.6
1,505,361	+		IAI47_07130	0.69	-0.1
1,505,361	+		IAI47_07130	0.69	-0.4
1,505,361	+		IAI47_07130	0.69	-0.2
1,505,361	+		IAI47_07130	0.69	-0.5
1,505,362	-		IAI47_07130	0.69	+0.8
1,505,362	-		IAI47_07130	0.69	+0.4
1,505,362	-		IAI47_07130	0.69	-0.8
1,505,362	-		IAI47_07130	0.69	+0.2
1,505,362	-		IAI47_07130	0.69	-0.8
1,505,365	+		IAI47_07130	0.69	+1.2
1,505,365	+		IAI47_07130	0.69	+0.1
1,505,365	+		IAI47_07130	0.69	-0.7
1,505,365	+		IAI47_07130	0.69	-0.8
1,505,366	-		IAI47_07130	0.69	+0.7
1,505,406	+		IAI47_07130	0.72	-1.4
1,505,427	-		IAI47_07130	0.74	+0.0
1,505,478	-		IAI47_07130	0.77	+1.4
1,505,511	-		IAI47_07130	0.80	-2.2
1,505,534	+		IAI47_07130	0.82	+1.8
1,505,535	-		IAI47_07130	0.82	+0.3
1,505,543	+		IAI47_07130	0.82	+0.2
1,505,586	-		IAI47_07130	0.85	-0.1
1,505,662	+				-0.3
1,505,662	+				+1.0
1,505,681	+				-0.4
1,505,681	+				+0.9
1,505,681	+				+0.4
1,505,681	+				+0.3
1,505,681	+				-0.1
1,505,682	-				+0.1
1,505,717	+				+0.4
1,505,717	+				-0.8
1,505,717	+				+0.6
1,505,721	+				-1.3
1,505,721	+				+0.9
1,505,781	+				+1.4
1,505,782	-				+0.6
1,505,782	-				-1.1
1,505,834	+				-0.3
1,505,835	-				-0.8
1,505,859	+				+0.8
1,505,859	+				+2.2
1,505,860	-				+0.8
1,505,860	-				-0.4
1,505,865	+				-0.2
1,505,865	+				-2.1
1,505,865	+				+0.2
1,505,866	-				-0.2
1,505,866	-				-1.6
1,505,869	+				-2.7
1,505,869	+				+0.8
1,505,869	+				-1.7
1,505,869	+				-0.8
1,505,869	+				+1.4
1,505,870	-				-1.8
1,505,870	-				-3.1
1,505,870	-				+0.8
1,505,870	-				+0.8
1,505,870	-				+0.2
1,505,870	-				-0.2
1,505,870	-				-1.6
1,505,870	-				-1.3
1,505,889	+				+1.2
1,505,889	+				-1.3
1,505,889	+				+0.5
1,505,889	+				-1.9
1,505,890	-				-1.4
1,505,890	-				-0.2
1,505,909	-				-1.7
1,505,910	+		IAI47_07135	0.10	-0.7
1,505,911	-		IAI47_07135	0.10	-1.3
1,505,911	-		IAI47_07135	0.10	-2.1
1,505,963	+		IAI47_07135	0.17	+0.1
1,506,033	+		IAI47_07135	0.26	-1.2
1,506,048	+		IAI47_07135	0.28	-3.6
1,506,084	+		IAI47_07135	0.33	-1.4
1,506,094	-		IAI47_07135	0.34	-0.1
1,506,094	-		IAI47_07135	0.34	+0.6
1,506,160	+		IAI47_07135	0.43	-0.8
1,506,161	-		IAI47_07135	0.43	+0.6
1,506,161	-		IAI47_07135	0.43	-2.0
1,506,161	-		IAI47_07135	0.43	-0.8
1,506,161	-		IAI47_07135	0.43	-0.5
1,506,161	-		IAI47_07135	0.43	-0.5
1,506,161	-		IAI47_07135	0.43	+0.3
1,506,222	+		IAI47_07135	0.51	-0.9
1,506,223	-		IAI47_07135	0.51	-1.3
1,506,281	-		IAI47_07135	0.59	-0.4
1,506,305	+		IAI47_07135	0.62	-0.8
1,506,305	+		IAI47_07135	0.62	-1.7
1,506,306	-		IAI47_07135	0.62	+1.5
1,506,306	-		IAI47_07135	0.62	-1.1
1,506,306	-		IAI47_07135	0.62	-1.2
1,506,306	-		IAI47_07135	0.62	+0.2
1,506,372	-		IAI47_07135	0.71	-0.4
1,506,428	-		IAI47_07135	0.78	-0.9
1,506,487	+		IAI47_07135	0.86	-1.2
1,506,487	+		IAI47_07135	0.86	-0.9
1,506,487	+		IAI47_07135	0.86	+1.4
1,506,488	-		IAI47_07135	0.86	+0.3
1,506,488	-		IAI47_07135	0.86	-1.9
1,506,488	-		IAI47_07135	0.86	-1.9
1,506,488	-		IAI47_07135	0.86	-0.1
1,506,488	-		IAI47_07135	0.86	-0.6
1,506,488	-		IAI47_07135	0.86	-2.3
1,506,488	-		IAI47_07135	0.86	-0.6
1,506,488	-		IAI47_07135	0.86	-1.3
1,506,594	+				-2.8
1,506,595	-				-1.8
1,506,612	+				-0.2
1,506,630	+				+0.9
1,506,635	+				+1.6
1,506,635	+				-1.1
1,506,636	-				+0.9
1,506,636	-				-0.1
1,506,682	+				+0.1
1,506,682	+				+1.2
1,506,682	+				+2.9
1,506,682	+				+0.9
1,506,683	-				+0.8
1,506,683	-				+1.5
1,506,683	-				+2.4
1,506,683	-				-0.0
1,506,683	-				+1.2
1,506,692	+				+1.3
1,506,692	+				+0.6
1,506,692	+				+0.2
1,506,693	-				+2.0
1,506,693	-				-0.1
1,506,702	+				-1.4
1,506,702	+				+1.8
1,506,703	-				+1.4
1,506,703	-				+0.8
1,506,703	-				+0.8
1,506,703	-				+0.5
1,506,703	-				-1.4
1,506,703	-				+0.3
1,506,703	-				-0.4
1,506,724	+				-0.5
1,506,724	+				-0.2
1,506,724	+				+0.1
1,506,735	-				+0.3