Strain Fitness in Pantoea sp. MT58 around IAI47_21820

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
111,789	+		IAI47_21815	0.56	-0.6
111,790	-		IAI47_21815	0.56	-1.8
111,815	+		IAI47_21815	0.58	+2.0
111,815	+		IAI47_21815	0.58	-0.6
111,815	+		IAI47_21815	0.58	-1.6
111,815	+		IAI47_21815	0.58	+1.0
111,815	+		IAI47_21815	0.58	-1.1
111,815	+		IAI47_21815	0.58	+0.2
111,816	-		IAI47_21815	0.58	-0.0
111,816	-		IAI47_21815	0.58	-0.4
111,816	-		IAI47_21815	0.58	-0.5
111,816	-		IAI47_21815	0.58	+2.0
111,816	-		IAI47_21815	0.58	+0.3
111,816	-		IAI47_21815	0.58	-0.9
111,858	+		IAI47_21815	0.61	-0.9
111,858	+		IAI47_21815	0.61	-1.3
111,858	+		IAI47_21815	0.61	-1.0
111,858	+		IAI47_21815	0.61	-0.0
111,859	-		IAI47_21815	0.61	+0.4
111,859	-		IAI47_21815	0.61	-2.2
111,910	+		IAI47_21815	0.65	+1.8
111,910	+		IAI47_21815	0.65	+0.6
111,910	+		IAI47_21815	0.65	-0.6
111,910	+		IAI47_21815	0.65	-0.8
111,910	+		IAI47_21815	0.65	+1.0
111,910	+		IAI47_21815	0.65	+0.5
111,910	+		IAI47_21815	0.65	+0.5
111,911	-		IAI47_21815	0.65	+1.0
111,911	-		IAI47_21815	0.65	+0.8
111,940	+		IAI47_21815	0.67	-0.9
111,940	+		IAI47_21815	0.67	-0.4
111,941	-		IAI47_21815	0.67	+2.0
111,941	-		IAI47_21815	0.67	-1.5
111,941	-		IAI47_21815	0.67	-0.4
111,941	-		IAI47_21815	0.67	+1.7
112,009	+		IAI47_21815	0.72	+1.6
112,009	+		IAI47_21815	0.72	-1.3
112,010	-		IAI47_21815	0.72	+0.0
112,012	+		IAI47_21815	0.72	-1.2
112,012	+		IAI47_21815	0.72	+1.3
112,012	+		IAI47_21815	0.72	-1.1
112,012	+		IAI47_21815	0.72	+0.6
112,012	+		IAI47_21815	0.72	+0.3
112,012	+		IAI47_21815	0.72	-1.4
112,013	-		IAI47_21815	0.72	-1.1
112,013	-		IAI47_21815	0.72	-0.1
112,013	-		IAI47_21815	0.72	-0.0
112,013	-		IAI47_21815	0.72	+1.0
112,013	-		IAI47_21815	0.72	-0.2
112,013	-		IAI47_21815	0.72	+1.8
112,013	-		IAI47_21815	0.72	+2.2
112,013	-		IAI47_21815	0.72	+1.2
112,146	+		IAI47_21815	0.82	+0.8
112,171	+		IAI47_21815	0.84	+2.8
112,215	+		IAI47_21815	0.87	-2.2
112,215	+		IAI47_21815	0.87	+0.4
112,216	-		IAI47_21815	0.87	+0.1
112,216	-		IAI47_21815	0.87	-1.0
112,216	-		IAI47_21815	0.87	+0.4
112,218	+		IAI47_21815	0.87	-0.5
112,218	+		IAI47_21815	0.87	-1.1
112,219	-		IAI47_21815	0.87	+0.3
112,219	-		IAI47_21815	0.87	-0.3
112,219	-		IAI47_21815	0.87	+0.4
112,221	+		IAI47_21815	0.87	-0.5
112,222	-		IAI47_21815	0.87	+2.4
112,222	-		IAI47_21815	0.87	-0.4
112,222	-		IAI47_21815	0.87	-1.4
112,243	+		IAI47_21815	0.89	+0.3
112,243	+		IAI47_21815	0.89	-1.0
112,243	+		IAI47_21815	0.89	-0.7
112,244	-		IAI47_21815	0.89	+0.3
112,244	-		IAI47_21815	0.89	-0.0
112,283	+				+0.3
112,283	+				+1.4
112,283	+				-1.8
112,283	+				-0.6
112,283	+				+0.2
112,284	-				+2.3
112,284	-				+0.7
112,284	-				-0.1
112,321	+				-1.7
112,321	+				-1.4
112,321	+				+0.9
112,322	-				-0.9
112,322	-				-1.3
112,360	+				-1.6
112,360	+				-1.6
112,360	+				-1.6
112,360	+				-0.0
112,361	-				+1.8
112,361	-				-0.8
112,361	-				-2.0
112,426	+				-0.3
112,426	+				+0.2
112,427	-				-1.8
112,427	-				+0.5
112,427	-				+3.1
112,430	+				-0.2
112,431	-				-1.4
112,431	-				+0.2
112,431	-				+0.7
112,440	-				+0.6
112,445	+				-2.1
112,450	+				-2.3
112,450	+				+0.3
112,450	+				+0.1
112,451	-				+2.2
112,451	-				+1.6
112,451	-				+0.2
112,477	+				-0.2
112,502	+				-0.6
112,504	+				-0.0
112,504	+				-1.6
112,505	-				-1.7
112,505	-				+0.6
112,515	+				-1.6
112,515	+				-1.8
112,515	+				-0.6
112,515	+				+1.2
112,516	-				-0.9
112,548	+				-0.6
112,549	-				-1.2
112,599	-				-0.9
112,599	-				-2.1
112,667	+				-1.9
112,668	-				+1.1
112,672	+				+1.2
112,674	+				+0.2
112,674	+				-0.8
112,674	+				-2.1
112,675	-				-1.8
112,675	-				+1.8
112,709	-				-0.2
112,709	-				-0.0
112,750	+				-1.0
112,750	+				+1.1
112,750	+				-0.3
112,750	+				-0.6
112,750	+				+0.5
112,750	+				+1.1
112,751	-				+2.5
112,751	-				+0.7
112,751	-				+2.3
112,751	-				+1.6
112,751	-				-0.0
112,751	-				-0.7
112,775	-				-0.2
112,808	-				-0.6
112,808	-				-0.9
112,870	+				+2.7
112,885	+				+2.3
112,885	+				+1.5
112,886	-				-0.1
112,913	+				+0.3
112,913	+				-0.2
112,913	+				+1.5
112,913	+				+0.5
112,914	-				-1.7
112,914	-				+1.2
112,914	-				+1.3
112,914	-				+2.0
112,914	-				-1.0
112,914	-				+0.6
112,914	-				-1.3
112,918	+				-1.0
112,919	-				-1.2
112,931	-		IAI47_21820	0.10	-1.5
112,942	+		IAI47_21820	0.11	+0.6
112,942	+		IAI47_21820	0.11	+1.0
112,942	+		IAI47_21820	0.11	+1.2
112,942	+		IAI47_21820	0.11	+0.5
112,980	+		IAI47_21820	0.13	+1.6
112,980	+		IAI47_21820	0.13	-2.0
112,980	+		IAI47_21820	0.13	+1.5
112,981	-		IAI47_21820	0.13	-1.2
112,981	-		IAI47_21820	0.13	-1.1
112,981	-		IAI47_21820	0.13	-0.1
112,981	-		IAI47_21820	0.13	+1.5
112,981	-		IAI47_21820	0.13	-0.3
112,981	-		IAI47_21820	0.13	+0.2
112,981	-		IAI47_21820	0.13	+0.1
112,996	+		IAI47_21820	0.14	-0.7
112,996	+		IAI47_21820	0.14	+0.1
112,996	+		IAI47_21820	0.14	-1.0
112,996	+		IAI47_21820	0.14	+2.4
112,996	+		IAI47_21820	0.14	-0.7
112,996	+		IAI47_21820	0.14	-0.0
112,996	+		IAI47_21820	0.14	+0.6
112,996	+		IAI47_21820	0.14	-0.4
112,996	+		IAI47_21820	0.14	+2.7
112,997	-		IAI47_21820	0.14	-0.9
112,997	-		IAI47_21820	0.14	-1.4
112,997	-		IAI47_21820	0.14	+1.2
112,997	-		IAI47_21820	0.14	+1.9
112,997	-		IAI47_21820	0.14	-0.6
113,015	-		IAI47_21820	0.15	-0.9
113,078	+		IAI47_21820	0.19	-0.2
113,078	+		IAI47_21820	0.19	-2.0
113,078	+		IAI47_21820	0.19	+0.0
113,078	+		IAI47_21820	0.19	+1.8
113,078	+		IAI47_21820	0.19	-0.7
113,079	-		IAI47_21820	0.19	+1.4
113,079	-		IAI47_21820	0.19	-0.5
113,079	-		IAI47_21820	0.19	+1.3
113,079	-		IAI47_21820	0.19	-0.1
113,182	+		IAI47_21820	0.25	+0.6
113,183	-		IAI47_21820	0.25	-1.5
113,183	-		IAI47_21820	0.25	+1.1
113,225	+		IAI47_21820	0.27	+0.6
113,225	+		IAI47_21820	0.27	-0.2
113,347	+		IAI47_21820	0.34	+0.0
113,348	-		IAI47_21820	0.34	+2.3
113,354	-		IAI47_21820	0.34	+1.6
113,366	+		IAI47_21820	0.35	-1.0
113,366	+		IAI47_21820	0.35	+0.5
113,367	-		IAI47_21820	0.35	+0.1
113,430	+		IAI47_21820	0.38	+0.4
113,430	+		IAI47_21820	0.38	+0.5
113,431	-		IAI47_21820	0.38	-0.0
113,431	-		IAI47_21820	0.38	-1.1
113,431	-		IAI47_21820	0.38	+0.1
113,431	-		IAI47_21820	0.38	+0.7
113,471	+		IAI47_21820	0.41	-0.1
113,471	+		IAI47_21820	0.41	-0.9
113,472	-		IAI47_21820	0.41	+0.8
113,472	-		IAI47_21820	0.41	-0.8
113,472	-		IAI47_21820	0.41	-1.3
113,472	-		IAI47_21820	0.41	+0.8
113,472	-		IAI47_21820	0.41	+2.0
113,472	-		IAI47_21820	0.41	+1.2
113,472	-		IAI47_21820	0.41	+0.2
113,472	-		IAI47_21820	0.41	+0.3
113,472	-		IAI47_21820	0.41	+1.3
113,472	-		IAI47_21820	0.41	+1.8
113,473	+		IAI47_21820	0.41	-1.1
113,473	+		IAI47_21820	0.41	+0.8
113,473	+		IAI47_21820	0.41	+2.0
113,473	+		IAI47_21820	0.41	-0.6
113,474	-		IAI47_21820	0.41	-1.5
113,474	-		IAI47_21820	0.41	+1.5
113,474	-		IAI47_21820	0.41	-0.3
113,474	-		IAI47_21820	0.41	-1.2
113,474	-		IAI47_21820	0.41	-1.0
113,474	-		IAI47_21820	0.41	-0.0
113,474	-		IAI47_21820	0.41	-2.1
113,478	+		IAI47_21820	0.41	-0.0
113,478	+		IAI47_21820	0.41	-0.9
113,478	+		IAI47_21820	0.41	+3.3
113,479	-		IAI47_21820	0.41	-0.2
113,479	-		IAI47_21820	0.41	-0.2
113,530	+		IAI47_21820	0.44	+1.4
113,530	+		IAI47_21820	0.44	-1.4
113,530	+		IAI47_21820	0.44	-0.7
113,531	-		IAI47_21820	0.44	+2.2
113,531	-		IAI47_21820	0.44	+1.0
113,531	-		IAI47_21820	0.44	-1.7
113,595	+		IAI47_21820	0.48	+0.1
113,716	+		IAI47_21820	0.54	+1.5
113,717	-		IAI47_21820	0.55	+2.0
113,731	+		IAI47_21820	0.55	+1.0
113,781	+		IAI47_21820	0.58	-1.7
113,781	+		IAI47_21820	0.58	-1.5
113,782	-		IAI47_21820	0.58	-0.5
113,799	+		IAI47_21820	0.59	+3.2
113,800	-		IAI47_21820	0.59	+0.4
113,800	-		IAI47_21820	0.59	+0.7
113,810	+		IAI47_21820	0.60	+0.8
113,810	+		IAI47_21820	0.60	+2.8
113,810	+		IAI47_21820	0.60	-1.1
113,811	-		IAI47_21820	0.60	+1.2
113,811	-		IAI47_21820	0.60	+0.6
113,818	+		IAI47_21820	0.60	+1.4
113,819	-		IAI47_21820	0.60	-0.9
113,950	-		IAI47_21820	0.68	+0.0
113,950	-		IAI47_21820	0.68	-1.5
113,950	-		IAI47_21820	0.68	-2.1
113,999	-		IAI47_21820	0.70	+0.6
114,005	+		IAI47_21820	0.71	-0.4
114,005	+		IAI47_21820	0.71	+1.1
114,005	+		IAI47_21820	0.71	-0.0
114,005	+		IAI47_21820	0.71	+1.2
114,005	+		IAI47_21820	0.71	+1.0
114,005	+		IAI47_21820	0.71	+0.8
114,005	+		IAI47_21820	0.71	+1.4
114,005	+		IAI47_21820	0.71	+1.7
114,005	+		IAI47_21820	0.71	-0.7
114,005	+		IAI47_21820	0.71	-2.9
114,005	+		IAI47_21820	0.71	-0.2
114,005	+		IAI47_21820	0.71	+1.6
114,005	+		IAI47_21820	0.71	+1.7
114,005	+		IAI47_21820	0.71	-1.6
114,005	+		IAI47_21820	0.71	+2.2
114,005	+		IAI47_21820	0.71	+0.6
114,005	+		IAI47_21820	0.71	+0.3
114,005	+		IAI47_21820	0.71	-1.0
114,006	-		IAI47_21820	0.71	-0.0
114,006	-		IAI47_21820	0.71	+1.5
114,006	-		IAI47_21820	0.71	+1.3
114,006	-		IAI47_21820	0.71	-2.5
114,006	-		IAI47_21820	0.71	-1.0
114,006	-		IAI47_21820	0.71	+1.2
114,006	-		IAI47_21820	0.71	+0.2
114,006	-		IAI47_21820	0.71	+1.0
114,006	-		IAI47_21820	0.71	-1.1
114,006	-		IAI47_21820	0.71	-1.6
114,006	-		IAI47_21820	0.71	-2.3
114,006	-		IAI47_21820	0.71	+0.0
114,006	-		IAI47_21820	0.71	+1.1
114,006	-		IAI47_21820	0.71	+1.2
114,006	-		IAI47_21820	0.71	-0.0
114,006	-		IAI47_21820	0.71	-0.1
114,006	-		IAI47_21820	0.71	+0.8
114,007	+		IAI47_21820	0.71	+0.0
114,007	+		IAI47_21820	0.71	+1.7
114,007	+		IAI47_21820	0.71	+0.2
114,007	+		IAI47_21820	0.71	+2.0
114,007	+		IAI47_21820	0.71	-0.8
114,007	+		IAI47_21820	0.71	+1.3
114,007	+		IAI47_21820	0.71	-0.2
114,008	-		IAI47_21820	0.71	+2.5
114,008	-		IAI47_21820	0.71	+1.3
114,008	-		IAI47_21820	0.71	+1.2
114,008	-		IAI47_21820	0.71	+1.0
114,008	-		IAI47_21820	0.71	-1.2
114,009	+		IAI47_21820	0.71	+1.5
114,009	+		IAI47_21820	0.71	+0.7
114,009	+		IAI47_21820	0.71	-0.8
114,009	+		IAI47_21820	0.71	+1.1
114,009	+		IAI47_21820	0.71	+0.1
114,009	+		IAI47_21820	0.71	+2.7
114,009	+		IAI47_21820	0.71	-1.0
114,009	+		IAI47_21820	0.71	+2.9
114,009	+		IAI47_21820	0.71	+0.1
114,009	+		IAI47_21820	0.71	+1.0
114,009	+		IAI47_21820	0.71	+1.0
114,009	+		IAI47_21820	0.71	+1.5
114,009	+		IAI47_21820	0.71	-1.3
114,009	+		IAI47_21820	0.71	-1.0
114,009	+		IAI47_21820	0.71	+0.9
114,009	+		IAI47_21820	0.71	+0.8
114,009	+		IAI47_21820	0.71	-0.2
114,009	+		IAI47_21820	0.71	-0.0
114,010	-		IAI47_21820	0.71	-0.8
114,010	-		IAI47_21820	0.71	-0.4
114,010	-		IAI47_21820	0.71	+0.9
114,010	-		IAI47_21820	0.71	+0.4
114,010	-		IAI47_21820	0.71	-0.8
114,010	-		IAI47_21820	0.71	-2.0
114,010	-		IAI47_21820	0.71	-1.6
114,010	-		IAI47_21820	0.71	-1.1
114,010	-		IAI47_21820	0.71	+0.4
114,010	-		IAI47_21820	0.71	+1.3
114,010	-		IAI47_21820	0.71	+2.1
114,010	-		IAI47_21820	0.71	+2.5
114,010	-		IAI47_21820	0.71	+1.2
114,010	-		IAI47_21820	0.71	+0.1
114,010	-		IAI47_21820	0.71	+0.9
114,010	-		IAI47_21820	0.71	-1.1
114,010	-		IAI47_21820	0.71	-0.4
114,028	+		IAI47_21820	0.72	-0.4
114,028	+		IAI47_21820	0.72	+0.0
114,028	+		IAI47_21820	0.72	-0.0
114,028	+		IAI47_21820	0.72	+1.4
114,028	+		IAI47_21820	0.72	+1.2
114,029	-		IAI47_21820	0.72	-0.4
114,029	-		IAI47_21820	0.72	+0.2
114,029	-		IAI47_21820	0.72	+0.3
114,041	-		IAI47_21820	0.73	-1.7
114,057	+		IAI47_21820	0.74	+1.2
114,058	-		IAI47_21820	0.74	+0.6
114,058	-		IAI47_21820	0.74	+0.4
114,058	-		IAI47_21820	0.74	-0.2
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