Strain Fitness in Pantoea sp. MT58 around IAI47_14970

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
3,154,968	-				+1.7
3,154,968	-				+1.6
3,154,987	+				-1.4
3,154,987	+				-1.0
3,154,987	+				+2.0
3,154,988	-				-0.5
3,154,988	-				-0.3
3,155,010	+				+0.7
3,155,011	-				-0.0
3,155,011	-				+0.5
3,155,011	-				-0.6
3,155,011	-				-1.3
3,155,013	+				-0.9
3,155,013	+				-1.5
3,155,013	+				+0.1
3,155,014	-				-1.1
3,155,014	-				-0.9
3,155,028	+				-0.1
3,155,029	-				+2.8
3,155,098	+				-2.1
3,155,098	+				-2.9
3,155,099	-				+0.2
3,155,131	+		IAI47_14960	0.15	-0.3
3,155,131	+		IAI47_14960	0.15	-2.3
3,155,131	+		IAI47_14960	0.15	-1.7
3,155,132	-		IAI47_14960	0.15	-0.8
3,155,132	-		IAI47_14960	0.15	-0.6
3,155,132	-		IAI47_14960	0.15	-1.8
3,155,132	-		IAI47_14960	0.15	-0.6
3,155,183	+		IAI47_14960	0.35	+0.0
3,155,183	+		IAI47_14960	0.35	+2.0
3,155,319	+		IAI47_14960	0.88	-1.4
3,155,320	-		IAI47_14960	0.89	-0.5
3,155,320	-		IAI47_14960	0.89	-1.2
3,155,325	+				+1.2
3,155,326	-				+1.6
3,155,382	+		IAI47_14965	0.18	+0.1
3,155,435	+		IAI47_14965	0.46	-1.0
3,155,446	+		IAI47_14965	0.52	+0.6
3,155,517	-		IAI47_14965	0.89	+0.3
3,155,517	-		IAI47_14965	0.89	+1.5
3,155,552	-				-0.2
3,155,563	-				+1.2
3,155,624	+				+0.3
3,155,624	+				-1.1
3,155,624	+				-1.8
3,155,625	-				-1.6
3,155,634	+				-0.6
3,155,634	+				+0.4
3,155,634	+				-1.3
3,155,634	+				-3.1
3,155,634	+				+0.0
3,155,635	-				-1.3
3,155,635	-				+0.5
3,155,635	-				+1.0
3,155,635	-				-1.2
3,155,635	-				+3.4
3,155,646	+				+0.5
3,155,647	-				+0.4
3,155,669	+				-1.3
3,155,669	+				-2.4
3,155,670	-				-1.1
3,155,679	+				-0.4
3,155,679	+				+1.2
3,155,680	-				-1.6
3,155,680	-				-0.2
3,155,684	+				+0.8
3,155,684	+				+0.0
3,155,684	+				-2.4
3,155,684	+				-0.3
3,155,684	+				-1.6
3,155,684	+				-0.3
3,155,684	+				-0.1
3,155,685	-				+0.9
3,155,685	-				-1.9
3,155,685	-				-0.5
3,155,685	-				+0.1
3,155,685	-				+0.3
3,155,685	-				-1.2
3,155,685	-				-1.3
3,155,685	-				+0.2
3,155,685	-				-1.3
3,155,685	-				+0.6
3,155,688	+				+0.2
3,155,688	+				-1.6
3,155,688	+				-0.8
3,155,688	+				-1.1
3,155,688	+				-0.3
3,155,688	+				+1.8
3,155,689	-				-0.1
3,155,689	-				-0.3
3,155,718	+				-0.9
3,155,718	+				+0.2
3,155,718	+				-0.3
3,155,718	+				+0.1
3,155,718	+				-0.6
3,155,718	+				-1.0
3,155,718	+				-1.7
3,155,718	+				+0.4
3,155,718	+				-0.7
3,155,719	-				-2.8
3,155,719	-				-1.7
3,155,719	-				-2.7
3,155,768	+				+0.0
3,155,791	+				-1.1
3,155,791	+				-0.2
3,155,791	+				-1.3
3,155,792	-				-1.8
3,155,792	-				-0.4
3,155,799	+				+0.9
3,155,800	-				+1.0
3,155,800	-				+1.9
3,155,808	+				+1.2
3,155,808	+				-1.4
3,155,808	+				+2.4
3,155,808	+				+0.2
3,155,808	+				-1.7
3,155,809	-				-1.0
3,155,809	-				+1.4
3,155,809	-				-1.8
3,155,818	+				+1.7
3,155,819	-				-1.1
3,155,819	-				+0.2
3,155,845	-				-1.5
3,155,853	+				+1.4
3,155,853	+				+0.4
3,155,854	-				+1.2
3,155,854	-				+0.8
3,155,854	-				-0.6
3,155,854	-				+0.7
3,155,854	-				+1.5
3,155,861	+				+0.9
3,155,884	-				-1.6
3,155,884	-				+0.6
3,155,924	+				-1.5
3,155,931	+				-1.1
3,155,955	+				+0.8
3,155,955	+				-0.3
3,155,956	-				+0.8
3,156,120	+				-1.8
3,156,120	+				-2.2
3,156,120	+				+0.5
3,156,120	+				-1.6
3,156,120	+				-0.2
3,156,120	+				-0.0
3,156,121	-				+1.2
3,156,121	-				-0.1
3,156,121	-				+0.0
3,156,121	-				-0.8
3,156,121	-				+1.3
3,156,121	-				+1.2
3,156,121	-				-0.6
3,156,121	-				-0.4
3,156,121	-				-1.4
3,156,121	-				+0.9
3,156,124	+				-0.3
3,156,124	+				+2.6
3,156,124	+				+0.8
3,156,125	-				+2.2
3,156,125	-				+0.2
3,156,125	-				+0.8
3,156,125	-				-1.8
3,156,125	-				+0.5
3,156,161	+				-3.2
3,156,162	-				+1.9
3,156,204	+				+2.0
3,156,205	-				-1.1
3,156,238	+				-1.8
3,156,238	+				-0.2
3,156,238	+				-1.6
3,156,239	-				-0.9
3,156,248	+				+1.6
3,156,248	+				+2.0
3,156,248	+				-1.8
3,156,248	+				+0.6
3,156,248	+				+1.6
3,156,248	+				-2.7
3,156,248	+				-0.5
3,156,248	+				-2.0
3,156,248	+				-1.3
3,156,248	+				-1.0
3,156,249	-				-1.0
3,156,249	-				-0.1
3,156,249	-				-0.6
3,156,249	-				+0.5
3,156,249	-				+3.2
3,156,249	-				+3.0
3,156,249	-				-2.1
3,156,249	-				-0.4
3,156,249	-				-0.3
3,156,249	-				-1.0
3,156,249	-				-0.6
3,156,249	-				-2.9
3,156,249	-				+1.4
3,156,249	-				+1.2
3,156,249	-				+1.1
3,156,249	-				+0.0
3,156,377	+		IAI47_14970	0.14	-0.9
3,156,421	+		IAI47_14970	0.15	+0.4
3,156,421	+		IAI47_14970	0.15	+2.0
3,156,421	+		IAI47_14970	0.15	+0.3
3,156,422	-		IAI47_14970	0.15	-0.9
3,156,422	-		IAI47_14970	0.15	-0.8
3,156,526	+		IAI47_14970	0.19	+0.5
3,156,526	+		IAI47_14970	0.19	-0.9
3,156,526	+		IAI47_14970	0.19	-1.6
3,156,526	+		IAI47_14970	0.19	-0.3
3,156,527	-		IAI47_14970	0.19	+0.8
3,156,527	-		IAI47_14970	0.19	+0.8
3,156,527	-		IAI47_14970	0.19	+0.3
3,156,543	+		IAI47_14970	0.19	-0.4
3,156,543	+		IAI47_14970	0.19	-0.5
3,156,543	+		IAI47_14970	0.19	-0.4
3,156,543	+		IAI47_14970	0.19	-0.1
3,156,543	+		IAI47_14970	0.19	+1.0
3,156,543	+		IAI47_14970	0.19	+1.4
3,156,543	+		IAI47_14970	0.19	-0.1
3,156,544	-		IAI47_14970	0.19	+0.2
3,156,544	-		IAI47_14970	0.19	+1.3
3,156,544	-		IAI47_14970	0.19	-0.3
3,156,544	-		IAI47_14970	0.19	-0.8
3,156,544	-		IAI47_14970	0.19	+1.5
3,156,544	-		IAI47_14970	0.19	-0.1
3,156,544	-		IAI47_14970	0.19	+4.4
3,156,581	+		IAI47_14970	0.21	+0.0
3,156,582	-		IAI47_14970	0.21	+0.3
3,156,582	-		IAI47_14970	0.21	-1.8
3,156,588	+		IAI47_14970	0.21	-0.2
3,156,588	+		IAI47_14970	0.21	-1.9
3,156,588	+		IAI47_14970	0.21	-1.2
3,156,588	+		IAI47_14970	0.21	-1.0
3,156,588	+		IAI47_14970	0.21	-0.3
3,156,588	+		IAI47_14970	0.21	-0.2
3,156,588	+		IAI47_14970	0.21	+0.2
3,156,588	+		IAI47_14970	0.21	-0.8
3,156,589	-		IAI47_14970	0.21	-1.4
3,156,645	+		IAI47_14970	0.23	-0.0
3,156,646	-		IAI47_14970	0.23	+1.2
3,156,659	+		IAI47_14970	0.23	-1.8
3,156,660	-		IAI47_14970	0.23	-0.8
3,156,660	-		IAI47_14970	0.23	+1.1
3,156,799	+		IAI47_14970	0.27	-1.0
3,156,799	+		IAI47_14970	0.27	-0.9
3,156,800	-		IAI47_14970	0.27	+1.3
3,156,872	-		IAI47_14970	0.30	+0.2
3,156,928	+		IAI47_14970	0.32	-2.0
3,156,928	+		IAI47_14970	0.32	+0.2
3,156,928	+		IAI47_14970	0.32	+0.2
3,156,929	-		IAI47_14970	0.32	+3.6
3,156,929	-		IAI47_14970	0.32	+0.1
3,156,929	-		IAI47_14970	0.32	-1.0
3,156,929	-		IAI47_14970	0.32	+0.2
3,157,043	+		IAI47_14970	0.35	+1.7
3,157,043	+		IAI47_14970	0.35	+0.6
3,157,043	+		IAI47_14970	0.35	+0.4
3,157,043	+		IAI47_14970	0.35	-0.8
3,157,043	+		IAI47_14970	0.35	-0.5
3,157,044	-		IAI47_14970	0.35	+0.3
3,157,044	-		IAI47_14970	0.35	+0.9
3,157,044	-		IAI47_14970	0.35	-1.6
3,157,120	+		IAI47_14970	0.38	+0.9
3,157,125	+		IAI47_14970	0.38	-0.2
3,157,125	+		IAI47_14970	0.38	-0.8
3,157,125	+		IAI47_14970	0.38	-0.6
3,157,126	-		IAI47_14970	0.38	-1.5
3,157,126	-		IAI47_14970	0.38	+1.2
3,157,160	-		IAI47_14970	0.39	-0.9
3,157,168	+		IAI47_14970	0.39	+1.1
3,157,168	+		IAI47_14970	0.39	+0.1
3,157,169	-		IAI47_14970	0.39	-1.2
3,157,169	-		IAI47_14970	0.39	-0.8
3,157,169	-		IAI47_14970	0.39	-1.8
3,157,169	-		IAI47_14970	0.39	-0.2
3,157,169	-		IAI47_14970	0.39	-1.2
3,157,290	+		IAI47_14970	0.43	-0.6
3,157,291	-		IAI47_14970	0.43	+0.4
3,157,291	-		IAI47_14970	0.43	-1.2
3,157,305	+		IAI47_14970	0.44	-2.4
3,157,305	+		IAI47_14970	0.44	+0.2
3,157,305	+		IAI47_14970	0.44	-1.7
3,157,305	+		IAI47_14970	0.44	+1.0
3,157,305	+		IAI47_14970	0.44	+1.4
3,157,305	+		IAI47_14970	0.44	-1.1
3,157,306	-		IAI47_14970	0.44	+2.3
3,157,402	+		IAI47_14970	0.47	-0.7
3,157,402	+		IAI47_14970	0.47	-1.1
3,157,402	+		IAI47_14970	0.47	+0.6
3,157,403	-		IAI47_14970	0.47	+2.2
3,157,403	-		IAI47_14970	0.47	-0.3
3,157,403	-		IAI47_14970	0.47	-0.3
3,157,423	-		IAI47_14970	0.47	-2.7
3,157,437	+		IAI47_14970	0.48	-2.7
3,157,438	-		IAI47_14970	0.48	-0.5
3,157,438	-		IAI47_14970	0.48	-0.4
3,157,440	+		IAI47_14970	0.48	+0.7
3,157,440	+		IAI47_14970	0.48	-1.1
3,157,440	+		IAI47_14970	0.48	-0.2
3,157,440	+		IAI47_14970	0.48	-0.3
3,157,440	+		IAI47_14970	0.48	-1.1
3,157,440	+		IAI47_14970	0.48	+0.4
3,157,440	+		IAI47_14970	0.48	-1.9
3,157,440	+		IAI47_14970	0.48	-0.3
3,157,440	+		IAI47_14970	0.48	+1.8
3,157,440	+		IAI47_14970	0.48	+0.2
3,157,440	+		IAI47_14970	0.48	-1.4
3,157,440	+		IAI47_14970	0.48	+1.7
3,157,441	-		IAI47_14970	0.48	+0.2
3,157,441	-		IAI47_14970	0.48	+1.2
3,157,441	-		IAI47_14970	0.48	+0.5
3,157,441	-		IAI47_14970	0.48	+0.5
3,157,453	+		IAI47_14970	0.48	+0.0
3,157,453	+		IAI47_14970	0.48	+0.7
3,157,453	+		IAI47_14970	0.48	-0.6
3,157,453	+		IAI47_14970	0.48	+3.0
3,157,454	-		IAI47_14970	0.48	+0.4
3,157,454	-		IAI47_14970	0.48	-0.1
3,157,454	-		IAI47_14970	0.48	-0.1
3,157,454	-		IAI47_14970	0.48	-2.8
3,157,454	-		IAI47_14970	0.48	+0.1
3,157,506	+		IAI47_14970	0.50	+0.0
3,157,506	+		IAI47_14970	0.50	+1.7
3,157,506	+		IAI47_14970	0.50	+0.5
3,157,506	+		IAI47_14970	0.50	+0.4
3,157,506	+		IAI47_14970	0.50	-0.2
3,157,507	-		IAI47_14970	0.50	+1.4
3,157,507	-		IAI47_14970	0.50	+1.8
3,157,507	-		IAI47_14970	0.50	-1.0
3,157,507	-		IAI47_14970	0.50	+0.6
3,157,558	+		IAI47_14970	0.52	-0.4
3,157,559	-		IAI47_14970	0.52	-0.5
3,157,600	+		IAI47_14970	0.53	+0.0
3,157,600	+		IAI47_14970	0.53	+1.4
3,157,601	-		IAI47_14970	0.53	+2.0
3,157,601	-		IAI47_14970	0.53	-0.8
3,157,708	+		IAI47_14970	0.56	+0.4
3,157,708	+		IAI47_14970	0.56	+1.1
3,157,709	-		IAI47_14970	0.56	+1.8
3,157,709	-		IAI47_14970	0.56	+2.7
3,157,729	-		IAI47_14970	0.57	+1.2
3,157,729	-		IAI47_14970	0.57	+0.1
3,157,734	+		IAI47_14970	0.57	+0.8
3,157,734	+		IAI47_14970	0.57	+1.7
3,157,752	+		IAI47_14970	0.58	+0.4
3,157,752	+		IAI47_14970	0.58	+1.0
3,157,752	+		IAI47_14970	0.58	-1.3
3,157,753	-		IAI47_14970	0.58	+0.9
3,157,753	-		IAI47_14970	0.58	-1.5
3,157,798	+		IAI47_14970	0.59	+0.4
3,157,798	+		IAI47_14970	0.59	-1.2
3,157,799	-		IAI47_14970	0.59	-1.0
3,157,825	+		IAI47_14970	0.60	+1.5
3,157,834	-		IAI47_14970	0.60	+1.6
3,157,879	+		IAI47_14970	0.62	+0.1
3,157,879	+		IAI47_14970	0.62	+0.5
3,157,879	+		IAI47_14970	0.62	-1.0
3,157,880	-		IAI47_14970	0.62	+1.1
3,157,880	-		IAI47_14970	0.62	-2.0
3,157,880	-		IAI47_14970	0.62	+0.6
3,157,958	+		IAI47_14970	0.64	+0.8
3,157,959	-		IAI47_14970	0.64	+0.0
3,157,959	-		IAI47_14970	0.64	+1.2
3,157,968	+		IAI47_14970	0.65	+0.7
3,158,018	+		IAI47_14970	0.66	+1.0
3,158,020	+		IAI47_14970	0.66	+0.3
3,158,020	+		IAI47_14970	0.66	+0.2
3,158,020	+		IAI47_14970	0.66	-0.3
3,158,021	-		IAI47_14970	0.66	-0.6
3,158,021	-		IAI47_14970	0.66	-0.2
3,158,021	-		IAI47_14970	0.66	+1.8
3,158,301	+		IAI47_14970	0.75	-1.4
3,158,302	-		IAI47_14970	0.75	+0.9
3,158,393	-		IAI47_14970	0.78	-0.7
3,158,393	-		IAI47_14970	0.78	+0.2
3,158,433	+		IAI47_14970	0.80	+0.4
3,158,433	+		IAI47_14970	0.80	-0.2
3,158,433	+		IAI47_14970	0.80	-2.0
3,158,434	-		IAI47_14970	0.80	+1.1
3,158,515	+		IAI47_14970	0.82	-0.5
3,158,515	+		IAI47_14970	0.82	-1.3
3,158,515	+		IAI47_14970	0.82	+0.3
3,158,515	+		IAI47_14970	0.82	+0.5
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