Strain Fitness in Pantoea sp. MT58 around IAI47_11120

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,343,932	+				+2.1
2,343,932	+				+0.2
2,343,934	-				+1.6
2,343,974	+				+1.0
2,343,974	+				-0.4
2,343,975	-				-0.6
2,343,975	-				-1.6
2,343,997	+				+0.0
2,343,998	-				+1.2
2,343,998	-				+2.4
2,343,998	-				+0.4
2,343,998	-				+0.2
2,344,004	-				-0.9
2,344,004	-				-0.9
2,344,004	-				-1.7
2,344,004	-				+0.8
2,344,004	-				-1.0
2,344,091	+		IAI47_11110	0.20	+0.6
2,344,091	+		IAI47_11110	0.20	-1.9
2,344,091	+		IAI47_11110	0.20	+0.6
2,344,091	+		IAI47_11110	0.20	+0.1
2,344,092	-		IAI47_11110	0.20	-0.2
2,344,092	-		IAI47_11110	0.20	-0.4
2,344,092	-		IAI47_11110	0.20	+1.5
2,344,092	-		IAI47_11110	0.20	-0.8
2,344,121	+		IAI47_11110	0.26	+0.2
2,344,121	+		IAI47_11110	0.26	-1.4
2,344,121	+		IAI47_11110	0.26	+0.5
2,344,121	+		IAI47_11110	0.26	-0.8
2,344,122	-		IAI47_11110	0.26	-1.1
2,344,122	-		IAI47_11110	0.26	-0.8
2,344,163	+		IAI47_11110	0.35	+1.6
2,344,163	+		IAI47_11110	0.35	+2.6
2,344,164	-		IAI47_11110	0.35	-2.4
2,344,164	-		IAI47_11110	0.35	+1.1
2,344,250	-		IAI47_11110	0.52	+1.3
2,344,360	+		IAI47_11110	0.74	-1.8
2,344,360	+		IAI47_11110	0.74	+2.2
2,344,391	-		IAI47_11110	0.81	-0.9
2,344,402	-		IAI47_11110	0.83	+1.6
2,344,409	-		IAI47_11110	0.84	+0.3
2,344,409	-		IAI47_11110	0.84	-0.4
2,344,417	+		IAI47_11110	0.86	-1.0
2,344,417	+		IAI47_11110	0.86	-0.7
2,344,417	+		IAI47_11110	0.86	+1.3
2,344,417	+		IAI47_11110	0.86	+2.6
2,344,418	-		IAI47_11110	0.86	+1.2
2,344,418	-		IAI47_11110	0.86	-0.1
2,344,517	+				+1.8
2,344,517	+				+1.4
2,344,517	+				-1.6
2,344,517	+				+1.3
2,344,521	+				+0.4
2,344,521	+				+1.3
2,344,521	+				-0.7
2,344,522	-				-1.9
2,344,530	+				+0.2
2,344,530	+				-2.3
2,344,530	+				+0.9
2,344,530	+				+1.3
2,344,530	+				+0.1
2,344,531	-				+0.7
2,344,531	-				-0.7
2,344,561	+				+0.5
2,344,589	+		IAI47_11115	0.21	-0.1
2,344,589	+		IAI47_11115	0.21	-2.0
2,344,602	-		IAI47_11115	0.26	+2.0
2,344,636	+		IAI47_11115	0.40	+0.1
2,344,636	+		IAI47_11115	0.40	-2.0
2,344,636	+		IAI47_11115	0.40	-1.7
2,344,636	+		IAI47_11115	0.40	+1.8
2,344,637	-		IAI47_11115	0.41	-0.1
2,344,637	-		IAI47_11115	0.41	+1.8
2,344,673	-		IAI47_11115	0.56	+0.2
2,344,738	-		IAI47_11115	0.83	+2.8
2,344,742	+		IAI47_11115	0.85	+0.2
2,344,832	+				-0.5
2,344,850	-				+1.0
2,344,882	+				-0.5
2,344,882	+				-0.0
2,344,883	-				+2.6
2,344,883	-				+3.9
2,344,932	+				-0.9
2,344,932	+				+2.2
2,344,933	-				+0.3
2,344,933	-				-0.1
2,344,937	+				-0.3
2,344,937	+				-0.9
2,344,937	+				+0.3
2,344,937	+				-3.0
2,344,938	-				+0.5
2,344,938	-				-1.1
2,344,946	+				+0.5
2,344,947	-				+0.8
2,345,034	+		IAI47_11120	0.13	+0.5
2,345,034	+		IAI47_11120	0.13	+1.6
2,345,066	+		IAI47_11120	0.15	-1.1
2,345,099	+		IAI47_11120	0.18	+1.0
2,345,099	+		IAI47_11120	0.18	+2.6
2,345,116	-		IAI47_11120	0.19	+2.2
2,345,205	+		IAI47_11120	0.25	+0.9
2,345,205	+		IAI47_11120	0.25	+0.6
2,345,206	-		IAI47_11120	0.25	+0.6
2,345,206	-		IAI47_11120	0.25	-2.2
2,345,264	+		IAI47_11120	0.29	+1.2
2,345,269	+		IAI47_11120	0.29	+1.7
2,345,306	+		IAI47_11120	0.32	+1.3
2,345,348	-		IAI47_11120	0.35	+2.5
2,345,348	-		IAI47_11120	0.35	-2.1
2,345,348	-		IAI47_11120	0.35	-0.1
2,345,348	-		IAI47_11120	0.35	-1.0
2,345,357	+		IAI47_11120	0.35	-0.9
2,345,438	-		IAI47_11120	0.41	+3.7
2,345,486	+		IAI47_11120	0.44	-0.3
2,345,486	+		IAI47_11120	0.44	-1.1
2,345,490	-		IAI47_11120	0.45	+1.4
2,345,490	-		IAI47_11120	0.45	-1.1
2,345,515	+		IAI47_11120	0.47	+3.0
2,345,515	+		IAI47_11120	0.47	-2.0
2,345,515	+		IAI47_11120	0.47	-1.1
2,345,515	+		IAI47_11120	0.47	-0.5
2,345,515	+		IAI47_11120	0.47	-0.2
2,345,515	+		IAI47_11120	0.47	-0.1
2,345,516	-		IAI47_11120	0.47	+1.4
2,345,524	+		IAI47_11120	0.47	+2.3
2,345,525	-		IAI47_11120	0.47	-1.4
2,345,525	-		IAI47_11120	0.47	-1.4
2,345,525	-		IAI47_11120	0.47	-0.3
2,345,525	-		IAI47_11120	0.47	-0.7
2,345,551	+		IAI47_11120	0.49	-2.2
2,345,563	+		IAI47_11120	0.50	+0.6
2,345,563	+		IAI47_11120	0.50	-1.6
2,345,563	+		IAI47_11120	0.50	-2.4
2,345,563	+		IAI47_11120	0.50	+2.6
2,345,563	+		IAI47_11120	0.50	+0.8
2,345,564	-		IAI47_11120	0.50	+3.0
2,345,564	-		IAI47_11120	0.50	+1.6
2,345,564	-		IAI47_11120	0.50	+1.2
2,345,564	-		IAI47_11120	0.50	+2.5
2,345,564	-		IAI47_11120	0.50	-0.2
2,345,564	-		IAI47_11120	0.50	+2.0
2,345,564	-		IAI47_11120	0.50	-0.9
2,345,647	+		IAI47_11120	0.56	+0.9
2,345,647	+		IAI47_11120	0.56	-0.8
2,345,647	+		IAI47_11120	0.56	+1.2
2,345,648	-		IAI47_11120	0.56	-1.4
2,345,648	-		IAI47_11120	0.56	-1.3
2,345,648	-		IAI47_11120	0.56	+0.0
2,345,650	+		IAI47_11120	0.56	+0.2
2,345,650	+		IAI47_11120	0.56	+3.0
2,345,650	+		IAI47_11120	0.56	+0.6
2,345,650	+		IAI47_11120	0.56	-1.8
2,345,650	+		IAI47_11120	0.56	+0.2
2,345,650	+		IAI47_11120	0.56	-0.2
2,345,650	+		IAI47_11120	0.56	+0.6
2,345,651	-		IAI47_11120	0.56	+3.9
2,345,651	-		IAI47_11120	0.56	+1.8
2,345,651	-		IAI47_11120	0.56	-0.0
2,345,651	-		IAI47_11120	0.56	+1.8
2,345,651	-		IAI47_11120	0.56	+0.6
2,345,651	-		IAI47_11120	0.56	-0.7
2,345,736	-		IAI47_11120	0.62	-1.0
2,345,745	-		IAI47_11120	0.63	+0.4
2,345,746	+		IAI47_11120	0.63	-0.5
2,345,746	+		IAI47_11120	0.63	+0.3
2,345,747	-		IAI47_11120	0.63	-0.7
2,345,747	-		IAI47_11120	0.63	+1.2
2,345,747	-		IAI47_11120	0.63	-0.0
2,345,945	-		IAI47_11120	0.76	-0.8
2,345,945	-		IAI47_11120	0.76	-0.4
2,346,062	+		IAI47_11120	0.85	-0.4
2,346,160	+				-0.4
2,346,161	-				+0.9
2,346,331	+				-1.3
2,346,338	+				+2.3
2,346,338	+				-0.7
2,346,338	+				-2.5
2,346,339	-				+1.1
2,346,343	+				+0.3
2,346,344	-				-0.7
2,346,348	+				-0.4
2,346,348	+				-1.1
2,346,349	-				-1.2
2,346,349	-				-1.0
2,346,389	+				-0.4
2,346,389	+				+0.3
2,346,389	+				+0.1
2,346,389	+				-0.4
2,346,389	+				+0.1
2,346,389	+				-1.0
2,346,390	-				-1.9
2,346,390	-				+1.1
2,346,390	-				+2.4
2,346,390	-				-1.1
2,346,391	+				-0.7
2,346,391	+				+1.6
2,346,392	-				-0.4
2,346,392	-				+1.9
2,346,392	-				-0.3
2,346,414	-				-1.5
2,346,426	+				-1.8
2,346,427	-				+0.6
2,346,469	-				+0.0
2,346,486	-				+0.5
2,346,486	-				+0.3
2,346,504	-				+0.6
2,346,504	-				+0.8
2,346,505	+				-1.0
2,346,505	+				-1.6
2,346,506	-				+0.7
2,346,506	-				-0.7
2,346,506	-				+0.0
2,346,506	-				+0.4
2,346,587	+		IAI47_11125	0.16	+0.3
2,346,667	+		IAI47_11125	0.26	-0.8
2,346,668	-		IAI47_11125	0.27	-0.4
2,346,719	+		IAI47_11125	0.33	-0.5
2,346,787	+		IAI47_11125	0.41	-0.2
2,346,799	+		IAI47_11125	0.43	-1.3
2,346,799	+		IAI47_11125	0.43	-1.9
2,346,800	-		IAI47_11125	0.43	+0.2
2,346,800	-		IAI47_11125	0.43	+0.5
2,346,803	+		IAI47_11125	0.43	+0.9
2,346,803	+		IAI47_11125	0.43	+0.2
2,346,803	+		IAI47_11125	0.43	-0.8
2,346,803	+		IAI47_11125	0.43	+0.4
2,346,803	+		IAI47_11125	0.43	-0.7
2,346,803	+		IAI47_11125	0.43	-2.3
2,346,803	+		IAI47_11125	0.43	-1.4
2,346,804	-		IAI47_11125	0.44	-1.7
2,346,804	-		IAI47_11125	0.44	-0.8
2,346,804	-		IAI47_11125	0.44	-1.4
2,346,804	-		IAI47_11125	0.44	-1.4
2,346,866	+		IAI47_11125	0.51	+0.4
2,346,867	-		IAI47_11125	0.52	-0.4
2,346,867	-		IAI47_11125	0.52	-1.9
2,346,867	-		IAI47_11125	0.52	-0.8
2,346,867	-		IAI47_11125	0.52	+1.8
2,346,867	-		IAI47_11125	0.52	-1.0
2,346,868	+		IAI47_11125	0.52	+0.1
2,346,868	+		IAI47_11125	0.52	+0.8
2,346,868	+		IAI47_11125	0.52	+1.2
2,346,868	+		IAI47_11125	0.52	-2.0
2,346,868	+		IAI47_11125	0.52	-0.1
2,346,869	-		IAI47_11125	0.52	-0.1
2,346,869	-		IAI47_11125	0.52	-2.9
2,346,869	-		IAI47_11125	0.52	-0.4
2,346,869	-		IAI47_11125	0.52	-2.3
2,346,869	-		IAI47_11125	0.52	-1.1
2,346,869	-		IAI47_11125	0.52	+2.3
2,346,869	-		IAI47_11125	0.52	-1.1
2,346,908	+		IAI47_11125	0.57	-0.5
2,346,908	+		IAI47_11125	0.57	+0.4
2,346,908	+		IAI47_11125	0.57	+2.5
2,346,908	+		IAI47_11125	0.57	+1.5
2,346,909	-		IAI47_11125	0.57	+1.8
2,346,909	-		IAI47_11125	0.57	-1.0
2,346,909	-		IAI47_11125	0.57	+1.4
2,346,909	-		IAI47_11125	0.57	-1.8
2,346,912	-		IAI47_11125	0.57	-1.4
2,346,987	+		IAI47_11125	0.67	-0.6
2,347,030	+		IAI47_11125	0.72	-1.4
2,347,031	-		IAI47_11125	0.72	+2.4
2,347,031	-		IAI47_11125	0.72	+1.9
2,347,093	+		IAI47_11125	0.80	+0.9
2,347,253	+				-1.5
2,347,266	+				-0.1
2,347,266	+				+0.6
2,347,266	+				+1.8
2,347,266	+				+2.6
2,347,266	+				-0.5
2,347,266	+				-0.4
2,347,267	-				-1.1
2,347,267	-				+1.2
2,347,267	-				-0.1
2,347,267	-				-2.1