Strain Fitness in Pantoea sp. MT58 around IAI47_07860

Experiment: Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 0 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,663,569	-		IAI47_07855	0.29	+1.9
1,663,569	-		IAI47_07855	0.29	+0.7
1,663,569	-		IAI47_07855	0.29	+1.1
1,663,608	+		IAI47_07855	0.34	+1.0
1,663,608	+		IAI47_07855	0.34	+0.3
1,663,609	-		IAI47_07855	0.34	+0.9
1,663,609	-		IAI47_07855	0.34	-0.3
1,663,609	-		IAI47_07855	0.34	-0.6
1,663,648	+		IAI47_07855	0.39	-1.1
1,663,648	+		IAI47_07855	0.39	+2.0
1,663,649	-		IAI47_07855	0.40	-1.4
1,663,649	-		IAI47_07855	0.40	-0.7
1,663,649	-		IAI47_07855	0.40	+1.0
1,663,766	+		IAI47_07855	0.55	+0.4
1,663,767	-		IAI47_07855	0.55	+0.1
1,663,780	+		IAI47_07855	0.57	+1.3
1,663,780	+		IAI47_07855	0.57	-0.9
1,663,781	-		IAI47_07855	0.57	+0.7
1,663,795	+		IAI47_07855	0.59	-2.4
1,663,795	+		IAI47_07855	0.59	-0.4
1,663,795	+		IAI47_07855	0.59	-0.9
1,663,795	+		IAI47_07855	0.59	-1.2
1,663,796	-		IAI47_07855	0.59	+1.6
1,663,796	-		IAI47_07855	0.59	-1.5
1,663,796	-		IAI47_07855	0.59	-0.8
1,663,797	+		IAI47_07855	0.59	-1.4
1,663,797	+		IAI47_07855	0.59	+0.1
1,663,797	+		IAI47_07855	0.59	-0.0
1,663,797	+		IAI47_07855	0.59	-0.3
1,663,797	+		IAI47_07855	0.59	-0.3
1,663,797	+		IAI47_07855	0.59	-2.3
1,663,797	+		IAI47_07855	0.59	+0.3
1,663,797	+		IAI47_07855	0.59	+0.9
1,663,797	+		IAI47_07855	0.59	+2.3
1,663,797	+		IAI47_07855	0.59	+0.9
1,663,798	-		IAI47_07855	0.60	+1.1
1,663,798	-		IAI47_07855	0.60	-1.0
1,663,798	-		IAI47_07855	0.60	+1.3
1,663,798	-		IAI47_07855	0.60	-0.2
1,663,798	-		IAI47_07855	0.60	-0.8
1,663,798	-		IAI47_07855	0.60	-1.7
1,663,798	-		IAI47_07855	0.60	-0.2
1,663,798	-		IAI47_07855	0.60	-0.3
1,663,798	-		IAI47_07855	0.60	-0.1
1,663,798	-		IAI47_07855	0.60	-0.6
1,663,798	-		IAI47_07855	0.60	+1.0
1,663,798	-		IAI47_07855	0.60	+1.0
1,663,798	-		IAI47_07855	0.60	-0.4
1,663,861	+		IAI47_07855	0.68	+1.1
1,663,862	-		IAI47_07855	0.68	-1.7
1,663,862	-		IAI47_07855	0.68	-0.4
1,663,862	-		IAI47_07855	0.68	-0.1
1,663,862	-		IAI47_07855	0.68	+1.7
1,663,862	-		IAI47_07855	0.68	+1.5
1,663,862	-		IAI47_07855	0.68	-0.8
1,663,936	+		IAI47_07855	0.78	+0.3
1,663,936	+		IAI47_07855	0.78	+1.2
1,663,937	-		IAI47_07855	0.78	-0.6
1,663,937	-		IAI47_07855	0.78	+1.7
1,663,937	-		IAI47_07855	0.78	-1.6
1,664,010	+		IAI47_07855	0.88	+0.0
1,664,010	+		IAI47_07855	0.88	+0.9
1,664,010	+		IAI47_07855	0.88	-0.1
1,664,010	+		IAI47_07855	0.88	+1.5
1,664,010	+		IAI47_07855	0.88	-1.8
1,664,010	+		IAI47_07855	0.88	+1.5
1,664,011	-		IAI47_07855	0.88	+1.7
1,664,011	-		IAI47_07855	0.88	-0.2
1,664,011	-		IAI47_07855	0.88	+3.0
1,664,018	+		IAI47_07855	0.89	+1.1
1,664,018	+		IAI47_07855	0.89	+0.5
1,664,019	-		IAI47_07855	0.89	-1.9
1,664,019	-		IAI47_07855	0.89	-0.1
1,664,019	-		IAI47_07855	0.89	-0.2
1,664,019	-		IAI47_07855	0.89	+1.4
1,664,033	+				+0.5
1,664,034	-				-0.9
1,664,115	+				-0.9
1,664,126	+				-1.4
1,664,139	+				+0.7
1,664,139	+				+0.5
1,664,139	+				-0.3
1,664,139	+				+1.1
1,664,139	+				-1.2
1,664,140	-				-0.4
1,664,140	-				-0.4
1,664,140	-				+1.4
1,664,140	-				-0.0
1,664,140	-				+0.4
1,664,321	+				+2.7
1,664,321	+				-2.6
1,664,321	+				+0.7
1,664,321	+				+1.0
1,664,427	+				+1.6
1,664,427	+				-0.4
1,664,427	+				+0.8
1,664,427	+				-0.8
1,664,427	+				+0.7
1,664,428	-				-2.2
1,664,428	-				-1.1
1,664,428	-				-1.3
1,664,428	-				-1.0
1,664,528	+				+0.4
1,664,529	-				-0.4
1,664,537	+				+0.6
1,664,538	-				+1.1
1,664,538	-				-1.7
1,664,556	+				+0.1
1,664,556	+				+0.7
1,664,556	+				-1.1
1,664,557	-				+0.8
1,664,557	-				-1.4
1,664,614	+				-1.7
1,664,614	+				+0.8
1,664,614	+				+0.8
1,664,614	+				-0.6
1,664,614	+				+0.5
1,664,614	+				+0.3
1,664,614	+				+1.1
1,664,614	+				+1.3
1,664,614	+				-1.1
1,664,615	-				-2.4
1,664,615	-				-0.8
1,664,615	-				-0.6
1,664,615	-				+0.7
1,664,615	-				-0.4
1,664,616	+				-1.0
1,664,616	+				+0.8
1,664,616	+				+0.9
1,664,616	+				-1.2
1,664,616	+				-1.1
1,664,616	+				-1.7
1,664,616	+				+1.6
1,664,617	-				-0.9
1,664,617	-				-0.4
1,664,617	-				+2.9
1,664,617	-				-0.1
1,664,617	-				-2.5
1,664,673	-		IAI47_07860	0.11	+1.1
1,664,734	+		IAI47_07860	0.16	+0.1
1,664,735	-		IAI47_07860	0.16	+0.7
1,664,735	-		IAI47_07860	0.16	+0.3
1,664,735	-		IAI47_07860	0.16	+2.1
1,664,782	+		IAI47_07860	0.20	-0.4
1,664,782	+		IAI47_07860	0.20	+2.3
1,664,782	+		IAI47_07860	0.20	+1.4
1,664,782	+		IAI47_07860	0.20	+1.6
1,664,782	+		IAI47_07860	0.20	+0.1
1,664,783	-		IAI47_07860	0.20	-2.3
1,664,783	-		IAI47_07860	0.20	-0.6
1,664,783	-		IAI47_07860	0.20	-0.8
1,664,783	-		IAI47_07860	0.20	+0.5
1,664,783	-		IAI47_07860	0.20	-0.2
1,664,783	-		IAI47_07860	0.20	-2.1
1,664,783	-		IAI47_07860	0.20	+0.4
1,664,784	+		IAI47_07860	0.20	-1.3
1,664,785	-		IAI47_07860	0.20	+0.6
1,664,799	+		IAI47_07860	0.21	+1.4
1,664,800	-		IAI47_07860	0.21	+1.7
1,664,800	-		IAI47_07860	0.21	+0.1
1,664,806	+		IAI47_07860	0.22	+0.6
1,664,806	+		IAI47_07860	0.22	+0.1
1,664,806	+		IAI47_07860	0.22	+0.9
1,664,807	-		IAI47_07860	0.22	+0.5
1,664,807	-		IAI47_07860	0.22	-1.0
1,664,807	-		IAI47_07860	0.22	-0.3
1,664,807	-		IAI47_07860	0.22	+0.7
1,664,875	-		IAI47_07860	0.27	-1.1
1,664,892	+		IAI47_07860	0.28	-0.5
1,664,893	-		IAI47_07860	0.28	-2.1
1,664,958	+		IAI47_07860	0.33	-0.1
1,664,958	+		IAI47_07860	0.33	-0.9
1,664,959	-		IAI47_07860	0.34	-0.5
1,664,959	-		IAI47_07860	0.34	-1.1
1,664,959	-		IAI47_07860	0.34	-3.1
1,664,959	-		IAI47_07860	0.34	+0.2
1,664,991	+		IAI47_07860	0.36	+0.1
1,665,013	-		IAI47_07860	0.38	-0.2
1,665,132	+		IAI47_07860	0.47	+0.7
1,665,132	+		IAI47_07860	0.47	+2.8
1,665,132	+		IAI47_07860	0.47	+2.0
1,665,133	-		IAI47_07860	0.47	+0.0
1,665,133	-		IAI47_07860	0.47	-0.1
1,665,133	-				+0.6
1,665,216	+		IAI47_07860	0.53	+0.5
1,665,217	-		IAI47_07860	0.53	-0.3
1,665,231	+		IAI47_07860	0.55	-1.7
1,665,286	-		IAI47_07860	0.59	+0.4
1,665,431	-		IAI47_07860	0.70	+0.2
1,665,488	+		IAI47_07860	0.74	+0.6
1,665,488	+		IAI47_07860	0.74	-0.6
1,665,488	+		IAI47_07860	0.74	-2.5
1,665,488	+		IAI47_07860	0.74	-3.0
1,665,489	-		IAI47_07860	0.74	-0.5
1,665,491	+		IAI47_07860	0.75	-0.6
1,665,491	+		IAI47_07860	0.75	-1.0
1,665,491	+		IAI47_07860	0.75	+0.4
1,665,491	+		IAI47_07860	0.75	+3.3
1,665,491	+		IAI47_07860	0.75	+0.3
1,665,491	+		IAI47_07860	0.75	-0.6
1,665,491	+		IAI47_07860	0.75	+1.7
1,665,491	+		IAI47_07860	0.75	+1.2
1,665,491	+		IAI47_07860	0.75	+0.6
1,665,491	+		IAI47_07860	0.75	+1.3
1,665,492	-		IAI47_07860	0.75	-1.7
1,665,492	-		IAI47_07860	0.75	+1.1
1,665,550	+		IAI47_07860	0.79	+1.9
1,665,550	+		IAI47_07860	0.79	-0.4
1,665,551	-		IAI47_07860	0.79	-1.2
1,665,551	-		IAI47_07860	0.79	-0.4
1,665,609	+		IAI47_07860	0.84	-0.4
1,665,609	+		IAI47_07860	0.84	+2.1
1,665,610	-		IAI47_07860	0.84	-2.4
1,665,610	-		IAI47_07860	0.84	+0.0
1,665,624	+		IAI47_07860	0.85	+0.6
1,665,624	+		IAI47_07860	0.85	+0.3
1,665,624	+		IAI47_07860	0.85	-0.6
1,665,625	-		IAI47_07860	0.85	-0.3
1,665,625	-		IAI47_07860	0.85	-0.4
1,665,627	+		IAI47_07860	0.85	-0.9
1,665,627	+		IAI47_07860	0.85	-0.5
1,665,627	+		IAI47_07860	0.85	-1.4
1,665,627	+		IAI47_07860	0.85	+1.1
1,665,627	+		IAI47_07860	0.85	+0.6
1,665,627	+		IAI47_07860	0.85	+1.4
1,665,627	+		IAI47_07860	0.85	+0.1
1,665,628	-		IAI47_07860	0.85	-0.6
1,665,628	-		IAI47_07860	0.85	+0.7
1,665,628	-		IAI47_07860	0.85	-2.5
1,665,628	-		IAI47_07860	0.85	-1.4
1,665,628	-		IAI47_07860	0.85	-0.0
1,665,630	+		IAI47_07860	0.85	-0.7
1,665,631	-		IAI47_07860	0.85	-1.7
1,665,676	+		IAI47_07860	0.89	-0.0
1,665,676	+		IAI47_07860	0.89	-0.1
1,665,677	-		IAI47_07860	0.89	-0.2
1,665,677	-		IAI47_07860	0.89	-0.9
1,665,677	-		IAI47_07860	0.89	+3.5
1,665,681	+		IAI47_07860	0.89	-2.2
1,665,681	+		IAI47_07860	0.89	-0.2
1,665,681	+		IAI47_07860	0.89	-1.9
1,665,682	-		IAI47_07860	0.89	+0.4
1,665,682	-		IAI47_07860	0.89	-1.8
1,665,682	-		IAI47_07860	0.89	-1.4
1,665,682	-		IAI47_07860	0.89	-1.1
1,665,682	-		IAI47_07860	0.89	+2.0
1,665,687	+		IAI47_07860	0.90	+2.6
1,665,712	-				+1.5
1,665,755	+				+0.4
1,665,755	+				-1.4
1,665,756	-				+0.0
1,665,756	-				-0.3
1,665,795	+				-0.5
1,665,795	+				-0.1
1,665,795	+				+0.4
1,665,817	+				-0.8
1,665,817	+				+1.7
1,665,817	+				-1.0
1,665,817	+				-0.1
1,665,818	-				-1.0
1,665,818	-				-1.4
1,665,818	-				-2.0
1,665,818	-				+2.9
1,665,818	-				+0.3
1,665,818	-				+1.1
1,665,818	-				+1.2
1,665,818	-				+1.6
1,665,818	-				-1.6
1,665,843	+				+0.5
1,665,844	-				-0.3
1,665,844	-				-1.9
1,665,844	-				-0.4
1,665,844	-				-0.2
1,665,876	-				+0.8
1,666,265	+				-1.6
1,666,265	+				+2.6
1,666,266	-				+0.7
1,666,266	-				+1.2
1,666,371	-				-1.7
1,666,757	-				+0.7
1,666,757	-				-0.3
1,666,757	-				-0.6
1,666,757	-				+1.9
1,666,779	-				+1.1